Os08g0400300

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0400300| Description = Conserved hypothetical protein| Version = NM_001068289.1 GI:115476315 GeneID:4345510| Length = 3930 bp| Definition ...")
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Gene Name

Os08g0400300

Description

Conserved hypothetical protein

Version

NM_001068289.1 GI:115476315 GeneID:4345510

Length

3930 bp

Definition

Oryza sativa Japonica Group Os08g0400300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19182912..19186841

Sequence Coding Region

19184341..19185296,19185920..19186409

Expression

GEO Profiles:Os08g0400300

Genome Context

<gbrowseImage1> name=NC_008401:19182912..19186841 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19182912..19186841 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgctgctgaagcaagggctgcttggcagcgtgctgcaaaccgttgcatcgttcaggaggatagaaaaagagcaccaaaactagcctgctgtccaccatcatcagaacagcagcatgtcaaaagcaatggaaattgtaggaattctgaagaccgccctgtgcccaatttcatgccattgagctggaatcccatgaactccagtctgccacctgatattagatggtggcttcagttacaaccaaatttaggagggcagaagaatcttgcaggtgagcacctatattttctgggaagagagatcagtgataaggaagtggaggattcagcacaaaagaatatacacgacgaaccattattttgtgaaatgttcgacaccaatcctgagaagattgaggatgtttttgagccttcgtggatggtttccacagcttccatgaagtattcttctgaaacaggcttacaagacttgaaaaatataggtggctattcccaagttccttcgaagtgcaaagaaaatgccagtgactgtttgttcaatgataaagaattcctggatttcaaaaattttaacccaccaccgtcgaagaacccacagaaggacgattttgatatgaatgcgccttggaaaggaggtgaaaggagtcaaccatggtggcagatcactgatgagaatgagctggctttactggttgcagaaagagcaatgcagcatattgagaattgcgatttaccaagacctacccagatagttcgtgttcagggtactgaatcacgcagtcatgaaaatatgggtaggtacagggggtcatcaggtccagcaggtacaatgtcatatcctgatactggacaatgtgaacatattgaatgcagttacagcacagcaagcacagatgaggtggatttaaccagtgatggagtttggcaacagcaggaaagaaatgttgcacgcagtgatgcacaagatttttctaggggcatcaatacagaaccacgaggcaagcgaacataccagaatcctgcagagcaagctcaacttttggaggcactttgtcactcgcaaacacgggcgagggaagctgagatggctgggaagaaagcacaaagtgaaaaagacgatgtcatcaagctatttttcagacaggcctcgcatctctttgcgtgcaaacaatggctgaaaatgttacagttggagaacatctgcctccagcttaaacacagagagcatcagatagcaaccatgatacctgatattccatggattacactaaagaaaaggactacaccagatcatgagaaagaagattggacaaggaagaaaggcagaaggcataaaaatgcagggagtttctgtgacgcgctcttatttgccgttggtttaggtcttgcaggtgcagggctgcttcttggctggacatttgggtggcttctggccaagttctga</cdnaseq>

Protein Sequence

<aaseq>MAAAEARAAWQRAANRCIVQEDRKRAPKLACCPPSSEQQHVKSN GNCRNSEDRPVPNFMPLSWNPMNSSLPPDIRWWLQLQPNLGGQKNLAGEHLYFLGREI SDKEVEDSAQKNIHDEPLFCEMFDTNPEKIEDVFEPSWMVSTASMKYSSETGLQDLKN IGGYSQVPSKCKENASDCLFNDKEFLDFKNFNPPPSKNPQKDDFDMNAPWKGGERSQP WWQITDENELALLVAERAMQHIENCDLPRPTQIVRVQGTESRSHENMGRYRGSSGPAG TMSYPDTGQCEHIECSYSTASTDEVDLTSDGVWQQQERNVARSDAQDFSRGINTEPRG KRTYQNPAEQAQLLEALCHSQTRAREAEMAGKKAQSEKDDVIKLFFRQASHLFACKQW LKMLQLENICLQLKHREHQIATMIPDIPWITLKKRTTPDHEKEDWTRKKGRRHKNAGS FCDALLFAVGLGLAGAGLLLGWTFGWLLAKF</aaseq>

Gene Sequence

<dnaseqindica>1430..2385#3009..3498#gctgctgcgtcacctcagtacctcacctcatctcatccatcgtttgctccgtttctgtgggatttccaccggctgattctctcgccctcctcccataaagcgaccggtggttcgcaccggacggatgccccaatctttgcatcgaggggcaacgaagcgaggtcacggatgcgggcgatgccaccgccgtcttcttgtccctagatccatcaaggtatccatttctttctctcccccctccgtgttgcccgtctctctgccacttcttgttggtctaatcgagcaagaagggggatgatggtttgtgtggtgtggcaagaacatcagggcttgggtttcttggtggtggaggttgttgatcgattctcgttgtgccccccctttgctggaggcagatcgatctatgtgggcaccttctgttattaaggaattatattcctttttcacggttttcaaggcttcgggagcatcataaacacgtttatggtgttgagtgttttgggtcttttacatctgtacagttttatatgaatcctataaatggacttaaaactatttgaaaaaaaggatatttgtgagttggcaaatatggaacctagttaactcattgccgaatggtataattttgcatattaaaaactttcttcaaggatgagcagaaaatttgagttcaaaatcaaatccagttgcctagtactttgtctgcatagaagatgcagggcacaagaattggttatgtaatgctgatacttgaccaattcagttgattctttactgatattcatatgacaggaatacaggattcaacctatgttcctaaataacaataataacgttgtcaaattgcaaatatgagtcatcctccgggttctgattagatgtttgttcatcctccatgctctgattactgtgcgtgcagtgttaggaggacagagacaagaaaatgcttgtatatctgccaatatcgtgttcttggttgttcatatccttggtctctcatgctttcaagttggccttggccatcagtttatgctctgtgcattacctagctttgtttaatgtgtattggtcaatcccgagaaaaaggaactacatgatgaccttagttcatgcttattaaagcagtgtcatatctctcatttcaagccatggaactctttccattgaaaacctcatttgaaacaacggttgaagtacaacagtagaacacaagattagtatttcttaaaaattgaaatcctagaatttagccagcattttatatgcactgatatgcatgcttgcactttgtggattatgtgtttgctctgttgcttgagtttattttatcctccttctgtgtgttgctttgagcgtgcttctgttgttaaactgatgttgatgttttctgtttatgattcagtgaccagttctctgatcagtgagaataatggccgctgctgaagcaagggctgcttggcagcgtgctgcaaaccgttgcatcgttcaggaggatagaaaaagagcaccaaaactagcctgctgtccaccatcatcagaacagcagcatgtcaaaagcaatggaaattgtaggaattctgaagaccgccctgtgcccaatttcatgccattgagctggaatcccatgaactccagtctgccacctgatattagatggtggcttcagttacaaccaaatttaggagggcagaagaatcttgcaggtgagcacctatattttctgggaagagagatcagtgataaggaagtggaggattcagcacaaaagaatatacacgacgaaccattattttgtgaaatgttcgacaccaatcctgagaagattgaggatgtttttgagccttcgtggatggtttccacagcttccatgaagtattcttctgaaacaggcttacaagacttgaaaaatataggtggctattcccaagttccttcgaagtgcaaagaaaatgccagtgactgtttgttcaatgataaagaattcctggatttcaaaaattttaacccaccaccgtcgaagaacccacagaaggacgattttgatatgaatgcgccttggaaaggaggtgaaaggagtcaaccatggtggcagatcactgatgagaatgagctggctttactggttgcagaaagagcaatgcagcatattgagaattgcgatttaccaagacctacccagatagttcgtgttcagggtactgaatcacgcagtcatgaaaatatgggtaggtacagggggtcatcaggtccagcaggtacaatgtcatatcctgatactggacaatgtgaacatattgaatgcagttacagcacagcaagcacagatgaggtggatttaaccagtgatggagtttggcaacagcaggaaagaaatgttgcacgcaggtgtgtatttcttctgccttactctgtcaccaatttaccctgatgccataattgtaatttccgtaagcatacctaaattttgatgcacatctattttaatttcctagttgatatctgaagttcaggtggtgcattacttctgtattacaaatagaattgctaaatattactgtagtctgaattatttggtgctaagtaggagtttccctttgtgttcgctaaaatgctgtttggtgctagtgagatcttttgtctgttcctgttcagttctctttttgaaaggaaaacttattatactggttaagtttcagttttggttcatttcagagatacattgttgctcactgcctacaggataatggtgccattgcccttgtttgcaaaagagttcatggacttcttcaaaaaagttgcttgttatatttgtttcatttaatcaatacctagagttttttttttaaaaaaaattcctattgttgattgggaactacacaatttcacaatctacattcatctattttaagttatgttccataatccgcactcggaaacttcaaatgtgctccattatttttcagtttcttgtgtttttctggttatcatttcatccaattttcctgcagtgatgcacaagatttttctaggggcatcaatacagaaccacgaggcaagcgaacataccagaatcctgcagagcaagctcaacttttggaggcactttgtcactcgcaaacacgggcgagggaagctgagatggctgggaagaaagcacaaagtgaaaaagacgatgtcatcaagctatttttcagacaggcctcgcatctctttgcgtgcaaacaatggctgaaaatgttacagttggagaacatctgcctccagcttaaacacagagagcatcagatagcaaccatgatacctgatattccatggattacactaaagaaaaggactacaccagatcatgagaaagaagattggacaaggaagaaaggcagaaggcataaaaatgcagggagtttctgtgacgcgctcttatttgccgttggtttaggtcttgcaggtgcagggctgcttcttggctggacatttgggtggcttctggccaagttctgaagttgcccatagttttcaactgagactagcttagctagctaggcatgtattttgctgtgcgcctgtatgtgatgattcatagatgaaatctccaggtatactctccatattggagtgagatggcgaaattttagacccaagaatatgttcgtttggaagctctgctagttagaagacacgaatgtatagggagcatttgttgcaaatttgcaatttgtaaatatgggaggaggacgtctgtgaatgcttgtacatactgatcagtagagaaaaaatgtcatcggacttcttcaacagtactccctccgtcccaaaaagaattaagaggggataagaattaagaggggatgtgatctctcctaggttgatctccaggttgatgtatgtgtttttgggacggagggagtatctccacctgtacctattatttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0400300, RefSeq:Os08g0400300