Os08g0404300

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0404300| Description = Similar to Chloroplast 50S ribosomal protein L27 (Fragment)| Version = NM_001068300.1 GI:115476337 GeneID:4345523| L...")
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Gene Name

Os08g0404300

Description

Similar to Chloroplast 50S ribosomal protein L27 (Fragment)

Version

NM_001068300.1 GI:115476337 GeneID:4345523

Length

3563 bp

Definition

Oryza sativa Japonica Group Os08g0404300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19395407..19398969

Sequence Coding Region

19397912..19397990,19398104..19398225,19398452..19398688

Expression

GEO Profiles:Os08g0404300

Genome Context

<gbrowseImage1> name=NC_008401:19395407..19398969 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19395407..19398969 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcggtctacactagcgcagcagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagccattgtaa</cdnaseq>

Protein Sequence

<aaseq>MAFSSVFRRGNVKELISNVSVYTSAAESSGGLSLIFKRWATKKT AGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIIRQRGTRFHPGNYVGMGKDHTLFCLKE GHVRFERNKLTGRKWVHVDPVAGHVLHPVYASDSTPAAEMEPL</aaseq>

Gene Sequence

<dnaseqindica>2506..2584#2698..2819#3046..3282#ctcctcaccccgcgcaccccctccacctcgccgccgccgccgactcgccggggctcgccgccaccggtggtgggggggagctcgacctcctcgccccacgcgcgcatccggacgccgtcgttctgggcgcgggagagatccgtccgtcgccccccgctgggcttgcgccatcctctcgccgggtaagccctaggtttttttttttttttggtccgatcgattccgccgcgctcctagccgcgggtgaggcaggaatcggggtggttgcggggggctcgtcgtgcggtcgagggatttggttgttcctagtaggaggggttgtacttgttcatcccgtcgatccagtggaggcgcgtgggagatctcggttgggggtttccgtgggctccgtgggttgccgctcgcggtgcagcggcgggatgtggatggggatggggatggcgtggtgggccgtaggtgcgagcaaccctagacggattttttttttgtggccattttagggtttacgggaatggattttttttttaccgaacaagagatgtactctgaaaattgctgtcttttcgtagcgaggggcctataggatcattgaagccttagggacttagggtttgggctgcttgcagctgtatttctcatttgtaaacattagacttccgtgtctgctgtgggaggatgaaagaattgacttgggagctgagttctattaggttcactggttttgtggagtaatgtttggaaataatctgagggagtataaggctgctccatcgcagtgccacgtgtagcattcggttcgaatttttcatttgtgtaatgtttcttagcagttactttttattttggaagttggttctcccaaaaaacttgtgtcctatctggtttatttgaaggtatcttaggacaacaagacgattagatgcaaaagttgaaagtaggggcattaacataaaccttgttgggtgcagaatatggtaattttatacgtattaattgcgtacgtaccgtttccacaaaattgttcatgtagtaataaataactgccaaagaaagctgatgtgactccatgaatgaatgtatactacgctatatctgctgtattgattgctgtagcaatccattcgttttcagtattgtgctggtgcattgtttgcaaaagcaaatcatatttattaatttttcattattgagttgcagcttgcaaatgtgtatgtatgtacatattgtgagagaaagtaggcatgtctgaactctcaacatgattattgtcataagaaaaatgttatcgttgtttttctctctttttgggtaactgtttgtgtttatggttataagttctatattataaatttgttcaggctggaattaggctgaccaaatccttgttttgaaattcgaattatattgatatatatcttgtacggtcattgcattttttattgttttgctttataactatatataggctggcttcattacgtactccctccgtcccaaaaaaacttaacctaggcaaggatgtgacatctcctagcacaataaatctggacagtcctttgtccagattcgttgtactagaaaatgtcacatcccttcctaggtttagtttttttgggacggagggagtaaacttgtctatgttaaagtttggaatatccaaaggtcctcaacctagtatgtactattttcttgaccttaacatggaactatacatgacctttttttttcctattttactgaataagatgattgtttgtttgcggtttcctaaatgtacttaactgttggtattgttgtgaagatgtgacggaattagtattgtggtattacatctatgtcgtagacagctttttgggtttgcaggaatgaagtacataaatatctgtttggtgctgtggtacaacaatgtaaatagtttattgcagtgacaatgttgcactgttgcatgcatttttgttaggatcatggttgtctgttgccttgttatgccattaacaaatctagaataagtgaagcagcttaaagttatgttctcgtgctcttaagagcaaacatttaagaggtataatagcattctgtgttcaaactatattttagaacctttgcccttgcttaaatagttttatttataagagatgttgaggagcaaacactgcatatctttacacttcacatacgaatatactttgtgctttgctgcctggattactgcatctacttttttgttaaattcaatttcttgcataaaatggggataagttaactgagagcttcagtagactagtacatcacaacctaggtaattggaagaattagctactatgattctttgttgaaacttaggtttagtaaaatagagtaaccagataataggttctatcaaatggaaactggagaaggtacttccatagtcgtatcattgttaatttcaccctcagtataatattagtgttgaatatatgaaagtttgctttcgatgatttcaggtgatttgagacaatcaagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcggtctacactagcgcagcaggtaatggctttggctttaggcagtctgagactcttgactgacttgagtctgtatttgtgctattttgaataaggtgcttggctgtttgaatgacaaaatatacctcattgcagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcggagaggtacaatcttgtgatctgtcatatgactttcatgtttttttattgtttatgacagcacaaagtactttctttaatcacgtaaaagtaatcagacttcggagatttgtgtgtcccttctgatcccgtacctgaactcctgaagcaacttgtcatttttgttattagaacaaaaaggtgaaaaagatctaaactgttcctgaacatcagcatttgcatcatttttcagaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagccattgtaatggctttacatggaatgaagtaacatatgttgctgacagctttcgtccttgccttgagagtgacttctctaaagaaacttattgcgattaagaggcttctgggttgaatttgcttgcaataaggaacctaaccatcatgtttagaacccttttgtttttggttcttgctgtggcttaaagttgtttgttttaagtatcctttgtgatttgtggcatgaaggttgacaaacctacatgatttatgaacacacagaaattctaaaaatgttgcttgggccggg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0404300, RefSeq:Os08g0404300