Os08g0409500

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0409500| Description = VQ domain containing protein| Version = NM_001068316.1 GI:115476369 GeneID:4345543| Length = 1662 bp| Definition = ...")
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Gene Name

Os08g0409500

Description

VQ domain containing protein

Version

NM_001068316.1 GI:115476369 GeneID:4345543

Length

1662 bp

Definition

Oryza sativa Japonica Group Os08g0409500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19698464..19700125

Sequence Coding Region

19698646..19699926

Expression

GEO Profiles:Os08g0409500

Genome Context

<gbrowseImage1> name=NC_008401:19698464..19700125 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19698464..19700125 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattccggcaacagcgggagtctccagtcgtcgagtggaggggacgacgagttcgactccagatgcggcggcggtggcgtggactcgtcgccgctctccgcgctgctgcggcagtcggcgtcggcgtcggggttcggtggtggcactggctcgttttatggcttgcaggagctcgcgtcgccgccgccccagctgccgcccttgtctcaggcggcggcgcatcagtggacggcgccgcttcccggtggaggtggagcggggggagcgtcgtcctcgccgccgtcgtcgtcgtcgccgcacggcgtgcaggtctctgccgagcaggtggtggcgcagcagggacagggggtcggcgcgccgccggcgagggggtcgaggaagcggacgcgggcgtcgcggcgcgcgccgacgacggtgctgaccaccgacacctccaacttccgcgccatggtgcaggagttcaccggcatcccctcgccgcccttcgccgggccacccgcgcgctcgcggttcgaccacctcttccccgccccctcctccctccgctccgccgctaccgccgccggcggcgggaacccgtcctcgctcccggcctacctcctccgcccgttcgcgcagaagcaccacccttccccgttcccgcctttcccctcgccctccacgtcctcgccgtcgccgtccaacattgccattgcaacctccaccgccgccgcaaccacggcggcggtggcggcacccggcgacaggtaccacctcgcgtcggcgccgtcgtcctctctcctagggatgcaggatcacggcggcagttacctctccttccagagccacctcggcggcgcccagctcggcgccagcgacgacgtcaagtacaccgcgcacaccatgttcgacgctcccggcagcgacctagccccgcggccgccgccgcagaggctgcaggatccggcggccggcttcctcggcctcacgcatggcatcatgggcgccgacgggtcgcacatgcaccagcaacaacgaagccgcggccacggccacggcggcgacgagctgtccggcgtggtcgggggcgcgtccatgacccggagcgtcggcggcggcggcaagaagacgaccttctcgtccggcgccggcgcggcggcccacgcagcgcctcaactggagcacaatgcggagagcacgtcggtcaccgtcgccgcagcgccgacaccttcgtcggcggcggcgacggcggcgatgagaacgcaatccgtggactcgtggatttgtacatcggagtag</cdnaseq>

Protein Sequence

<aaseq>MDSGNSGSLQSSSGGDDEFDSRCGGGGVDSSPLSALLRQSASAS GFGGGTGSFYGLQELASPPPQLPPLSQAAAHQWTAPLPGGGGAGGASSSPPSSSSPHG VQVSAEQVVAQQGQGVGAPPARGSRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPS PPFAGPPARSRFDHLFPAPSSLRSAATAAGGGNPSSLPAYLLRPFAQKHHPSPFPPFP SPSTSSPSPSNIAIATSTAAATTAAVAAPGDRYHLASAPSSSLLGMQDHGGSYLSFQS HLGGAQLGASDDVKYTAHTMFDAPGSDLAPRPPPQRLQDPAAGFLGLTHGIMGADGSH MHQQQRSRGHGHGGDELSGVVGGASMTRSVGGGGKKTTFSSGAGAAAHAAPQLEHNAE STSVTVAAAPTPSSAAATAAMRTQSVDSWICTSE</aaseq>

Gene Sequence

<dnaseqindica>183..1463#aatcaaaacctctcctcccctcttctgctgctgctactactactggtctactgcctctcgcctcgcctccctcacgttggatcccgtggagttgagatgattcgtagggaggcgtaggttgtggtcgttgttgcggtttggagttgcaccggcgagatcgagagaaaggggtggttcgtgggatggattccggcaacagcgggagtctccagtcgtcgagtggaggggacgacgagttcgactccagatgcggcggcggtggcgtggactcgtcgccgctctccgcgctgctgcggcagtcggcgtcggcgtcggggttcggtggtggcactggctcgttttatggcttgcaggagctcgcgtcgccgccgccccagctgccgcccttgtctcaggcggcggcgcatcagtggacggcgccgcttcccggtggaggtggagcggggggagcgtcgtcctcgccgccgtcgtcgtcgtcgccgcacggcgtgcaggtctctgccgagcaggtggtggcgcagcagggacagggggtcggcgcgccgccggcgagggggtcgaggaagcggacgcgggcgtcgcggcgcgcgccgacgacggtgctgaccaccgacacctccaacttccgcgccatggtgcaggagttcaccggcatcccctcgccgcccttcgccgggccacccgcgcgctcgcggttcgaccacctcttccccgccccctcctccctccgctccgccgctaccgccgccggcggcgggaacccgtcctcgctcccggcctacctcctccgcccgttcgcgcagaagcaccacccttccccgttcccgcctttcccctcgccctccacgtcctcgccgtcgccgtccaacattgccattgcaacctccaccgccgccgcaaccacggcggcggtggcggcacccggcgacaggtaccacctcgcgtcggcgccgtcgtcctctctcctagggatgcaggatcacggcggcagttacctctccttccagagccacctcggcggcgcccagctcggcgccagcgacgacgtcaagtacaccgcgcacaccatgttcgacgctcccggcagcgacctagccccgcggccgccgccgcagaggctgcaggatccggcggccggcttcctcggcctcacgcatggcatcatgggcgccgacgggtcgcacatgcaccagcaacaacgaagccgcggccacggccacggcggcgacgagctgtccggcgtggtcgggggcgcgtccatgacccggagcgtcggcggcggcggcaagaagacgaccttctcgtccggcgccggcgcggcggcccacgcagcgcctcaactggagcacaatgcggagagcacgtcggtcaccgtcgccgcagcgccgacaccttcgtcggcggcggcgacggcggcgatgagaacgcaatccgtggactcgtggatttgtacatcggagtaggtcaattcactcgcttcattatattccaagagcagattggcttgtagtagtaaagctcatttagctagtagcttaatttcatttggttctttaatatcttattaatctctactactcctttgggtgtttaattcccctatttgcatatgctctttgtgtagatcgatcaaaccaaacaacaagatcatactatcatagt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0409500, RefSeq:Os08g0409500