Os09g0428500

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0428500| Description = Conserved hypothetical protein| Version = NM_001069767.1 GI:115479276 GeneID:4347120| Length = 7913 bp| Definition ...")
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Gene Name

Os09g0428500

Description

Conserved hypothetical protein

Version

NM_001069767.1 GI:115479276 GeneID:4347120

Length

7913 bp

Definition

Oryza sativa Japonica Group Os09g0428500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16226655..16234567

Sequence Coding Region

16233885..16234050,16234138..16234226

Expression

GEO Profiles:Os09g0428500

Genome Context

<gbrowseImage1> name=NC_008402:16226655..16234567 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16226655..16234567 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggtccttgcttccttgccaactaacgatcccaggtccaggatcaccccgacgtggaattcatctgctccagggtcgttcgtcgcattcagagctacggcacatgaatgggcgaagagcatcagcaagaggatggctccaggaggtgctttctccattacaggactacctgctgaaaacttgagaagactttaccgtctctgcaagactacaatggtcaagaactcaagatcactatcatgtatatcatag</cdnaseq>

Protein Sequence

<aaseq>MLVLASLPTNDPRSRITPTWNSSAPGSFVAFRATAHEWAKSISK RMAPGGAFSITGLPAENLRRLYRLCKTTMVKNSRSLSCIS</aaseq>

Gene Sequence

<dnaseqindica>7231..7396#7484..7572#aaagttctcctgtcgccggggtcggcggcgaggcggcgacgccatggccgcacggcccacaggtcgccgccgccgcggcctcgccgtcgtcgtatcaagtaacatcgcgctctttgcgggtgcgctcccttttcctattagctttaattttggttacctttcttctctcctccctcaccgacgcatctctctcttacaggcggcgacgaagccgacgatggtcccggattctccggggggagatcgaatgcttctctccgccgccgagcgccgcggcagggtacggtctcagcaggtcggccatccattcctccccccccctccttcgctcactctgttcatggcggtagtcaggcggctctgaacgagggggagctcggagcccttttgattgggagtgcggaaaccctcggtggcggctcgtaactcgtagcccctggctccgaccacgtctccgcctgatggaggtggcatccagagagaggtgagttgctctcttcaaataaaattcatgttggatgttttagttcgtttagattttctatttccttggttatcgttcaatgccaaatcaaatggttttatttgtcctgtctctggaacatggggtacaatttagcacaccaagctattttaatctgaaaaggaaaaggaaatttccaccagaggagagcctcctgatgtttgtataatattgtaagacctaagctttgagatactatgcaaaatgtttaaggggacaaaagcaatcttagctgaacttcattagatgaacctttaaacgatgaaagcaatcgcccattttccgtcaagccacctcaccaatcgataaactattccggatgtatgagttttcctgcgtttattaagaattccgctgtgctaaaatcgagccgaacctgagattggtactactcgtgctccagtagctctctcgcccctatgaatgacaatagatgcactgcgcttaaccgtgctgttttgcagattcatgttttgtttcccttttgctccagtttcttcttgttccttctcttcctcaattgtgtctgctttaaattcttgtggaaaatcttgctctgcatctccaattccagattgaacttgcttgtttttgtagaaataaataaccagagcgatcaaaagcgaagaagttgaggcaattccagtaagaatgaagagacccttaaaactttcaaaggttagactacccgaaatagtgacaggacccacatttcggcacttattttgatctccaatccatttattctctatctgaatgatagtgtctcccccagttatattgaggattgccttcgagatgtcaccacgtagaggggattccttttggaatgcctgtgaaagaaatgtagcctttttattagcttctatcaacatatccctgattattttgcacgtgttaggaagggtaaactaagccttttgactctcttaacccaggaataggttaaccccttaccttttctactactatcccaactaaatttagttgagcaccactactgctacctggagtaggttaatttgcaaacacaagatgtgtgttacgctaacctaagatgggttaatgatagccaaccgagttatcttaacccaaaccagactcaaccttaattaattaatttaaatatgctagcccatctcaacttggttgagactaaagaattgttgtattagtagactgaagttgttaacactatccttttctgttcataaatagcaaatggcatctagccatcctgttagtcaattaatcaatggcaggcaatggtcagctacctatatcctttaattaaaaaaaggaagacataaatcagaatactgctgtaagtactctgtttactttacacaatcaaaggtgaataataatattttatactcttatgactcaaacactgagagaagcacattagattcagattgttatatgagagtattaatgaatagaccagacttgaaatatgatggcactttgttgcttgtaaatcaatctatgcgcctatgcaaatatacaacaggaaagttaaacttacaaatccaaagcctgctgtcttataaattggtccaaccattgtgtacccctcacagtgctttgcaagaaatagtttgatgtatgggatttcgtccacaacggcggaaataccaccattgctgcttcccctagaaagtgcatctcgaaaaccgtcagtgctatcatattgcctgatcttcgatttgtcaaaaccaagttcatctaaaagatccttgacgtaggaaccaccctgataacctacatattctccattttttaggagttcatgtacatcggttacagttggctgaagctgttgtacagttagcattgatgtcaaacttgctgtgtaacttgatgttagtaccagaagaaaaaataaccatatgatcaacactatccgggacagaaggcgttccaccatctcctctgaaaagttacaagaaggagttgagctattttgaagtggaaaatatcaaacttaaatgttggcatgttgtacatcaataaatcacaaattgtgaaaagtccttcctttatatacgcttatgttgtccagctatatcatctattttgttttactgggtaacagacaaatagtagggaaatatctactattaatatcacaaaaatatataaaagttacaggtaaggaaataaatacataaaaggtggagaagaaaagctgcaaattgactgatactgtcttgttttttttttgggtggaacatcacttttgacctacaactgtacaaatctatattcccaagattgtccattatttggggcgtgtagtcatctaagctatgaaatatgagtcacacaccgcatttcaaggaattcctagaaactttagggacttgtttatcaatcttaagattgcaaaatattttccacacaaagatccacatctgccaagttgacctaacgccttacatatccagaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataggacaaaatggcaagtatactcaactctttacaaacagggaaaaatatatcataaccatctgtttgggaattgggccacgaacagccttgttgttaccaagaaactccagcagccatacaacaacccctgtgtagataaagagtatgatgctcgcagaccacattccaaatgttagtggcttcaagaaaatccatgtcgtcgtgtttattctttttctgactggaacaaccattgctacgcctgattctgtgtatggcagactgaagtcggcatacgaagatcttttgtatgtgattgttatgtctgcaaccgctatatcatatttctgcatgtgcatcgaaataacttttggaaagtgcacaaagagaacttgaacgcaagttggtatgggtcctgaactacttagaaaaaaaacatggatatggtactaaagtaccatttgatgcataatattactacaaaatatattctggtagaaatttatttttagaacgtttaatacttcaattatcatgaatatggtttttgattgattttatggagcataaacaatttcttacatgactgattttgttagttaagaatgcaggacttatataaatttggaacaaaagtaatacatataagcagatgccttaaaatagtgaagcatgttgattatgcagtatgcactcatatgaacatataatggcagccatcttcatagctgcagcttactggcaatatataaaatgttggattttcttcatattttttgacatgactttggactaaaactaatatgaagtgggagagtgaaaaaaattaaacaattttgtaaacgccgaggttataatgttttacttgccttgagataaacttggtacacaaaatcatcatagctcgaacttatattctctgtagtgttgtagaatacatattcataagggagtgcataaggaagcctctttactgtctcttcaaacacttcaattgcaaggccacttgctttagtcatacccacgataagaggatccttctcagcgtatatatactctgggtatccatcacttgtgcatacaccaacctgaagcttctttccactcgttggaatttcccagcccctaggtatatttgtagattctcctggccaaatcacagggtttaggtcaggctttgtacttaaatatgtcccatttgatcttggtctggttaatcgctgtgaaaatccatcttgtgcagtccaaaacccaacatctctccatcctttcccaactatatttattatttgaaatgtggaaggctgcaattgcctgccagaaaggtcaaagtaaccactcaaacccctaaatttatactgcaaaattgcattgaggaacttgaggccattttcagtttctttggggactttcaagcttgtcatgctgtttgtcatatgctgtatctggactgtgtcttttgtagacttggccttttctactgcttgtgctactgcccagattgtatcatagccccataggccaaatatacttagtttcaacagtggatcatttgggttgtccattcggaatcttgtattccatcttacagtgaagttgtcaagttctgttgatttaggaacatagacccctacacccagggcaccattcatagcttccaaaactgatgggtttagtgatccaattaaactggccactccaaatgttacgatccatacatatcctttatccatcatccctacctcttttgcctttgtgaagagaacagaggccatgggagaggtcatatgtacaataaagaccctcgtttgcattgtcatcaacttgtatagttcctgggtgatttgctcacttgttgctgactgagggattatactctgataaggaacacgggcatcgttaccttggagtgcttcaagaaggtccggtataatacttctgccataatcagtgtctatgtagatcggaaccacctctctccatccatagtacttgattagagaggcaatgctattcacttgcgtggagtcatttattgttgcacgcaaaaaatatggattattgtcagaagtaagggatggacttgttgtggtgaaggatatgacaggtacttcacttatatttgcaatatctgtcatgaaaaatgcttctgaagatttctgagggccaatgatagctttcacattgtaattgttgagaaggtcaagagctgcaaaattgcataggcagcaaacagtagttataaattgtgcgtggatgcaaattaattttcttttagacaaaggaattaaggaagctttattgatcttagagaattacatcaagataatacaattactctaatacccactcccggcctctgcataactagtatgcttatcaagaactttcatgtgcttacagttgaaaattggaaaactgaaatactatcttaatcttctggtgcatgggatccggtttgcccatgcttcattgaaacataatttattgcagcaaaccttaacactgaggaagattggacatagaaaccccaacccattgatgtaacttggaatatatagtttagattttggactaatattataaataccacaataaataaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatcatacatctacctcagaagtttgcaaggagccaagaattcaaatttcgcctagtttcattcatcatctttggatgacatcattcattagtcccagctttgttgtttgcttcaaggcaatatggggtctcattctcttataacaatgcttgaaatgcattattatatcgccatgactacatttgtgtggaccaacttatacgcaattttggatttacttttgtactgtggaacatattgttattgatttgtgaacatgatcaacctaagtagaagactcaagacatcttattttttgatgactggatagctctaaatgaactgcaactggcaagtactttgaaaatggtgccatctgattgatttacctgttgccgattttttataaaataacctattattttctttcgtgaaatatttaacaggtcacttgacgcttccttatattatgatttttttgtttaatgcattatttaaatagcctctaacagatcctttcaaatcgatgtagtatttaatttaagtaattcaaaaaaaatgtcttttgttggaccgaatattttatcagctagagccttgaggggacttggttgtttgtacttttggttgcagtcttagttgtttaagcaactgctcccaatttgtttttctgaacggcgtgcaatatctcttgtctgtaagacaggaaatgaatagttctccaaactaaactctagctgactggtcaaaacttgtataatgatcccagcaaaacactatgatttagcacttgaaaaatggtagtaggtcactaacttatacgaggcttaaattatcggtgcaagttgaaaggttgatgccatcacctattattcgtgatgtgcactagccatctgattaaatatgagtgctctagatttgtctagttccacacagttatttgtttcagaattcagatgaccatacagccagcccagtgcaaggtggacacagaaagagagacggtggacgcagaacctatttggaatgcatgagtttgacataattagacttttctttcatttgtgtcagtcaggatgcaaactcaagaatctggctctgataacaatttatgatgtatgcatcaccaatgcaatccaaaatcttaaaccggtgaggaagagcgagcaattcacttattcttcgaacacaaggttttacccaggttttctttttcttttctgtctctgttttttttatcgaatctttctgtctcttattgacatcaaaatgactttctcggtctcccaacgaatatagtaaacaagacgctatatttcacgtgctatcttcctattgatatgtttcggcctcttttgtgttcctagccaggctaatgatgacggatatcacagttcacaatgtgttacaatactaatgcgatgcgttcttcattgtgcagaacatcgagcacgtacctgctgatgcagcctggaagttgttacccctggaatccctgacatggagaaccaaccttgttctgtagtttttatgcgatgcatagaagtcctccacagccattgagatgctggtccttgcttccttgccaactaacgatcccaggtccaggatcaccccgacgtggaattcatctgctccagggtcgttcgtcgcattcagagctacggcacatgaatgggcgaagagcatcagcaagaggatggctccaggaggtgctttctccattacaggtacctcaacaactgagactcctgcacagagcactgcgctgcacagcactggctagctcttatatatagtactgtatactcttgtaggactacctgctgaaaacttgagaagactttaccgtctctgcaagactacaatggtcaagaactcaagatcactatcatgtatatcatagtatgatacttggaagtatttgaaccgtctaatttgatgcgtttcatgacgcgtttatcgcagatggatccaaaaccatatatggaatgattcgtaggtggtttgtagaatgaacagtccatggaatagattccagaaactgttaatgactaattggcgccgttaggagcaaatcctgattgttcagcatctgggaatttctctttaattgcctcgagcaagcgatggcaagtcaactctactgattatactgaattggtcagtacaattactgtattctaacgacttgtattaatccttgactcgtccgtgaaaatcgactgctcatactctttaatatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0428500, RefSeq:Os09g0428500