Os08g0413000
| Gene Name |
Os08g0413000 |
|---|---|
| Description |
Similar to Valosin-containing protein (Fragment) |
| Version |
NM_001068333.1 GI:115476403 GeneID:4345563 |
| Length |
3727 bp |
| Definition |
Oryza sativa Japonica Group Os08g0413000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:19845082..19848808 |
| Sequence Coding Region |
19845082..19847189,19848370..19848808 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:19845082..19848808 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:19845082..19848808 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgacgccgacgtctcttcctccaagacgacgacggcgagggattacagcacggcgatcctggagtgcgccaagaagaagtccccgaaccggctgatggcggacgacgccgagggcggggtggccgtcgacaactccacggtgacgctcagcgaggcgaccatggaggagctcggcatcttccgcggcgacctggtgaccctccgcgggaggcggcgccgcgaggccgtctgctacgcgcagaaggacgagtcgtgccccgacggccgcctccgcctcagccgcggcgtccgcagcaacctccacgtccgcctcggcgacctcgtcaccgtcaagccgtgccccaccattaggaacgccaagagggtgcagctccgccccttcgacgactctgtcgagggcatctccggtgatctgttcgagccctacctcaaaccgtacttcatggatgcgttgcggccggtgaagaagggcgaccggttcctggtgcgcggccacatgcacgccgtggagttcaaggtgatggacacggagccgaacaacgagcccgtgatcgtggcgggcgacacggagatcttctgcgacgagggcgacccggtgaagcgcgaggacgaggagcggctcgacgggccgggctacgacgacgtcggcggcgtccgcaagcagctggcgcagatcagggagctcgtcgagctgcccctgcgccaccccaagctgttccagacgctcggcgtgcgcccgcccaagggcatcctcctctacgggccccccggcaccggcaagacgctgcttgcgcgcgccatcgccgccgagtccggcgcccacttcgtcgtcgtcaacgggccggagatcatgtccgggatgcccggcgagagcgaggccaacctgcgcgccgtgttcgccgaggcggacgccgcggcgccgtccatcgtgttcatggacgagatcgactccatcgcgcccagccgcgagaaggcgcacggcgaggtggagcgccgcgtcgtgtcgcagctgctcacgctcatggacggcctccgcccgcgggcccaggtgatcgtcatcggcgccaccaaccgccccaacagcctcgacccggcgctccgccgcttcggccgcttcgaccgcgagctcgacatcggcgtccccgacgagctcggccgcctcgagatcctccgcatccacaccaagaacatgccgctctccgacgacgtcgacctcgagcgcgtcggcaaggacacccacgggttcgtcggctccgacctcgcctcgctctgctccgaggccgccatgcagtgcatccgggagaagctggacatcatcgacatcgagaacgacaccatcgacgtggagatcctcaactcgctgaccgtcaccatggaccacctcaagttcgccatggaggtcaccaagccctccgccctgcgcgagaccgggatcgtcgaggtgcccaaggtgtcgtgggacgacatcggcggcctgggcgaggtcaagcgcgagctccaggagacggtgcagtacccggtggagcacccggagatgttcgacctgtttggcatgtcgccgtcgcgcggcgtgctcttctacggcccgccggggtgcggcaagacgatgatggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagctgctcaccatgtggttcggcgagagcgagggcaacgtccgcaacctgttcgacaaggcgcggcagtcggcgccgtgcatcctcttcttcgacgagctcgactccatcgccgtcaagcgcggcaacagcgtcggcgacgccggcggcacgccggaccgcgtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtcatcggcgccaccaaccggccggacatcatcgacccggcgatgctccggccgggccgcctcgaccagctcatctacatcccgctcccggacgcctcgtcgcggctggagatcttcagggcgaacctccgcaaggcgcccatgtcccgccacgtcgacctgccggccatggccgcctccaccgacgggttcagcggcgccgacatcaaggagatctgccagcgcgcgtgcaagctcgcggtgcgcgaggtggtccagaagagcaccctggtcgggaaggccctggcaatggcgggcgcggagctcaccgtggaccacttcaagagcgccatgaagcacgcaaggaagagcgtcagcgagctcgacgtcatcaagtacgagtacttcaagcacaagttcagcggcggcatccccgacgaggaggaggcgccggcgacggagccggagctgccggtgggacagctgaggttggtggcgaagccgaagacgaagacgaaggcggagctagaagcagaggcggaggctgcggcaaaagcgaaggcggaggcagaggcgaaggcgaaagcaaagctgaaggggaaggcggtggccgtggatgacgacgacgacgactctacgtactccatggattcgatggacgaggacttgctgtattag</cdnaseq> |
| Protein Sequence |
<aaseq>MADADVSSSKTTTARDYSTAILECAKKKSPNRLMADDAEGGVAV DNSTVTLSEATMEELGIFRGDLVTLRGRRRREAVCYAQKDESCPDGRLRLSRGVRSNL HVRLGDLVTVKPCPTIRNAKRVQLRPFDDSVEGISGDLFEPYLKPYFMDALRPVKKGD RFLVRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVKREDEERLDGPGYDDVG GVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAESGAH FVVVNGPEIMSGMPGESEANLRAVFAEADAAAPSIVFMDEIDSIAPSREKAHGEVERR VVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEIL RIHTKNMPLSDDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLDIIDIENDTIDV EILNSLTVTMDHLKFAMEVTKPSALRETGIVEVPKVSWDDIGGLGEVKRELQETVQYP VEHPEMFDLFGMSPSRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPELLTMWFGE SEGNVRNLFDKARQSAPCILFFDELDSIAVKRGNSVGDAGGTPDRVLNQLLTEMDGIN AKKTVFVIGATNRPDIIDPAMLRPGRLDQLIYIPLPDASSRLEIFRANLRKAPMSRHV DLPAMAASTDGFSGADIKEICQRACKLAVREVVQKSTLVGKALAMAGAELTVDHFKSA MKHARKSVSELDVIKYEYFKHKFSGGIPDEEEAPATEPELPVGQLRLVAKPKTKTKAE LEAEAEAAAKAKAEAEAKAKAKLKGKAVAVDDDDDDSTYSMDSMDEDLLY</aaseq> |
| Gene Sequence |
<dnaseqindica>1620..3727#1..439#atggccgacgccgacgtctcttcctccaagacgacgacggcgagggattacagcacggcgatcctggagtgcgccaagaagaagtccccgaaccggctgatggcggacgacgccgagggcggggtggccgtcgacaactccacggtgacgctcagcgaggcgaccatggaggagctcggcatcttccgcggcgacctggtgaccctccgcgggaggcggcgccgcgaggccgtctgctacgcgcagaaggacgagtcgtgccccgacggccgcctccgcctcagccgcggcgtccgcagcaacctccacgtccgcctcggcgacctcgtcaccgtcaagccgtgccccaccattaggaacgccaagagggtgcagctccgccccttcgacgactctgtcgagggcatctccggtgatctgttcgagccctacctcaaacgtaagcgttctaatctaatctatcccataaaccatcgtacgtcttacccgataattctactaatctaatctatccgataaaccatcgtacatcttacccgataattctactaatctaatctatctgataaatcatcgtacgtcttacccgataattctgataaaccatcgtacgtcttatctgataattctactaatctaatctatctgataaaccatcgtacgtcttacccgataattctgataaaccatagtacgtcttacccgataattctactaatctaatctatctgataaaccatcgtacgtcttacccgataattctacttgtaggagtagattttatttctagtctaatgtcttggcatgcaaagttagtttatttagttacaatctaataataattacccctcatatttagtttatttagttactatctaataagaattacctatgaacccctcatatttttcatgtctaataataattacccatatttagtttatttagttactatctaataataattacctatgagcccctcatatttttcatttttcatgaactaattagtatttcctccgtttcatattataagattttctaatattgcccacatttatacatatgttaataaatctagacatatatgtgtgcctaaattcattagcatccatatgaatatatgaatgtgagcaatggtagaaagttttataatctgaaacggaggtagtactacatagttactcattaatcttttatataatctcacgtacagtgttcatgaactaattaattagtactacctatttttcatgaactaattagtactatatagttactcatctattttttttataatctcacgtacagtgttcatgaactaattaattagtactacctattttttgtttgaagtagttcatgaactaattaattattaccaatgccttttttttgcagccgttcataaactaattaatcattactactatattctcatgaacttaaattagtagttactcatctaatttttttatctaatctcacgtacagtgtactatctatttttctattttttgtttgaagtagttcatgaactaattaattagtaattattactaatgtattttttttgccgtcgttcataaagacataaactaattaattatttcatgtagcgtacttcatggatgcgttgcggccggtgaagaagggcgaccggttcctggtgcgcggccacatgcacgccgtggagttcaaggtgatggacacggagccgaacaacgagcccgtgatcgtggcgggcgacacggagatcttctgcgacgagggcgacccggtgaagcgcgaggacgaggagcggctcgacgggccgggctacgacgacgtcggcggcgtccgcaagcagctggcgcagatcagggagctcgtcgagctgcccctgcgccaccccaagctgttccagacgctcggcgtgcgcccgcccaagggcatcctcctctacgggccccccggcaccggcaagacgctgcttgcgcgcgccatcgccgccgagtccggcgcccacttcgtcgtcgtcaacgggccggagatcatgtccgggatgcccggcgagagcgaggccaacctgcgcgccgtgttcgccgaggcggacgccgcggcgccgtccatcgtgttcatggacgagatcgactccatcgcgcccagccgcgagaaggcgcacggcgaggtggagcgccgcgtcgtgtcgcagctgctcacgctcatggacggcctccgcccgcgggcccaggtgatcgtcatcggcgccaccaaccgccccaacagcctcgacccggcgctccgccgcttcggccgcttcgaccgcgagctcgacatcggcgtccccgacgagctcggccgcctcgagatcctccgcatccacaccaagaacatgccgctctccgacgacgtcgacctcgagcgcgtcggcaaggacacccacgggttcgtcggctccgacctcgcctcgctctgctccgaggccgccatgcagtgcatccgggagaagctggacatcatcgacatcgagaacgacaccatcgacgtggagatcctcaactcgctgaccgtcaccatggaccacctcaagttcgccatggaggtcaccaagccctccgccctgcgcgagaccgggatcgtcgaggtgcccaaggtgtcgtgggacgacatcggcggcctgggcgaggtcaagcgcgagctccaggagacggtgcagtacccggtggagcacccggagatgttcgacctgtttggcatgtcgccgtcgcgcggcgtgctcttctacggcccgccggggtgcggcaagacgatgatggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagctgctcaccatgtggttcggcgagagcgagggcaacgtccgcaacctgttcgacaaggcgcggcagtcggcgccgtgcatcctcttcttcgacgagctcgactccatcgccgtcaagcgcggcaacagcgtcggcgacgccggcggcacgccggaccgcgtgctcaaccagctgctcaccgagatggacggcatcaacgccaagaagacggtgttcgtcatcggcgccaccaaccggccggacatcatcgacccggcgatgctccggccgggccgcctcgaccagctcatctacatcccgctcccggacgcctcgtcgcggctggagatcttcagggcgaacctccgcaaggcgcccatgtcccgccacgtcgacctgccggccatggccgcctccaccgacgggttcagcggcgccgacatcaaggagatctgccagcgcgcgtgcaagctcgcggtgcgcgaggtggtccagaagagcaccctggtcgggaaggccctggcaatggcgggcgcggagctcaccgtggaccacttcaagagcgccatgaagcacgcaaggaagagcgtcagcgagctcgacgtcatcaagtacgagtacttcaagcacaagttcagcggcggcatccccgacgaggaggaggcgccggcgacggagccggagctgccggtgggacagctgaggttggtggcgaagccgaagacgaagacgaaggcggagctagaagcagaggcggaggctgcggcaaaagcgaaggcggaggcagaggcgaaggcgaaagcaaagctgaaggggaaggcggtggccgtggatgacgacgacgacgactctacgtactccatggattcgatggacgaggacttgctgtattag</dnaseqindica> |
| External Link(s) |
