Os09g0428900

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0428900| Description = Similar to Conserved protein| Version = NM_001069768.1 GI:115479278 GeneID:4347121| Length = 3282 bp| Definition = ...")
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Gene Name

Os09g0428900

Description

Similar to Conserved protein

Version

NM_001069768.1 GI:115479278 GeneID:4347121

Length

3282 bp

Definition

Oryza sativa Japonica Group Os09g0428900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16236905..16240186

Sequence Coding Region

16236938..16237007,16237108..16237229,16237320..16237441,16237544..16237739,16237874..16237966
,16238765..16238824,16238925..16238999,16239434..16239514,16239624..16239980

Expression

GEO Profiles:Os09g0428900

Genome Context

<gbrowseImage1> name=NC_008402:16236905..16240186 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16236905..16240186 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggcagcaagtcgccgccgcggccgccgtcgccgccatcgccggcgctgccgccgttcttgcaagcgagctctacagtcggaggtgccgtcggttggcgacgagggtccgggagctggaggcctcgcttgccgccgccacggagaaggccgccgccgagcgccgcggtagggttcgggcgcagcagtcgctaaggaaggctctgagcgagcaagagctcagctcggatgagaagaagaagctgagccaatcccccaagtcgttccccatggcttcgatcggtgtcgtgcagtcatgcttctccactaggaatgggacgccgaggcagcctttggtggtgccacttgccagagcaaccgtgatgcttgatccagcccgtgtccctgcggaagcgcttgagggacttgccgattactcgcactgctggatcctttatgtgttccatctgaacactgaccttgataaaatgtggaatgaccctgctaggtccaagctaaaagcaaaagtgagagtacctaggttgaaagggggcaagatgggggttctggcaactagatctccacaccggcctaatccaattggactcagtgtagcgaaggttgaggcggtggatgggcattcaattttgctttctggagtagatttggttgatggcacgcccgtgcttgatatcaaaccgtatctgccatattctgatggtgttaaaggtgcagctattcctaattggttagaggttgacggtgcattagctgtggagtctatccacttttctgagcacttcatttcttcactttctgattgctggatgcatgtaaaaaagcaatcactctacgcttcagcagatgagtttcaggatcttgtcaaggaagtgctctcctgggacatcaggtcgctgtctcagcggatccgtccccatgatgtgaccataaaagatgtcactgataatggcggcagcaaaattgacaacggttgcagcaacgatgaggatcgccaatccgttgacccgtccactagcgtggtctaccaccttcatctagaaggcattgatgtgtcatacagaattgaccaagattccaacattgttgttgagaatgcagcccttctctccagtgctgtgaaccaacaccggtacagctacttaacatggagggaaaaggtaagcattttgtag</cdnaseq>

Protein Sequence

<aaseq>MARQQVAAAAAVAAIAGAAAVLASELYSRRCRRLATRVRELEAS LAAATEKAAAERRGRVRAQQSLRKALSEQELSSDEKKKLSQSPKSFPMASIGVVQSCF STRNGTPRQPLVVPLARATVMLDPARVPAEALEGLADYSHCWILYVFHLNTDLDKMWN DPARSKLKAKVRVPRLKGGKMGVLATRSPHRPNPIGLSVAKVEAVDGHSILLSGVDLV DGTPVLDIKPYLPYSDGVKGAAIPNWLEVDGALAVESIHFSEHFISSLSDCWMHVKKQ SLYASADEFQDLVKEVLSWDIRSLSQRIRPHDVTIKDVTDNGGSKIDNGCSNDEDRQS VDPSTSVVYHLHLEGIDVSYRIDQDSNIVVENAALLSSAVNQHRYSYLTWREKVSIL</aaseq>

Gene Sequence

<dnaseqindica>34..103#204..325#416..537#640..835#970..1062#1861..1920#2021..2095#2530..2610#2720..3076#gctggtctggacgccgcctccgccgccgccgccatggcgcggcagcaagtcgccgccgcggccgccgtcgccgccatcgccggcgctgccgccgttcttgcaagtaatatcgcatctgggaattcccttgtcctcttatagctttacggttggggtacttacttctctcctgttgctcaccggcgttgcaccgatctccacaggcgagctctacagtcggaggtgccgtcggttggcgacgagggtccgggagctggaggcctcgcttgccgccgccacggagaaggccgccgccgagcgccgcggtagggttcgggcgcagcaggtcgcaatccgtaaatctcgataccggtgttcacggccttcaaattttgcacgttttccccccgtttttgattagtttttctacttgcagtcgctaaggaaggctctgagcgagcaagagctcagctcggatgagaagaagaagctgagccaatcccccaagtcgttccccatggcttcgatcggtgtcgtgcagtcatgcttctccactaggtggtgccatctcttcatttcagccaattagttgtgcttttgtaggattcggtgaacttgttgagtagtaagaatgtaagagtgagtgatttttttttgcaggaatgggacgccgaggcagcctttggtggtgccacttgccagagcaaccgtgatgcttgatccagcccgtgtccctgcggaagcgcttgagggacttgccgattactcgcactgctggatcctttatgtgttccatctgaacactgaccttgataaaatgtggaatgaccctgctaggtccaagctaaaagcaaaagtatgatacggtgttaatgcttaatccttagtttgtacttttaattcttgatgaaaaatgattctttgtcatgttatatgttttgaggataaggggctgaaccaactaatcaaatgttccttttgctgttgaaggtgagagtacctaggttgaaagggggcaagatgggggttctggcaactagatctccacaccggcctaatccaattggactcagtgtagcgaaggtaagtattgtaggatccaaccctgcaggctcttattatctgtgcagcatatgcaattctctactattataaaaattgaagatgtttttgccggtacttttgtacgtcatctgtgtatgagtcggttttcaagtttgttcacttttggaaatacatatccgtatttggatcgtttattaagtttgttttctcttggaaatacataagagtcgtataagaaatctctttaaaaaaatcgcatgctaacttgagacgatcggactctaattacaactcatgattttaagcgaattcccacaatgaagttcacttaattaaaccgtataacaataataagattaaaataaccttcacccgtcgcaacgcacgggcatttgttctagtaaaggtaaaagtgtaatatgagtccaattgttggctccaattattattgcctttttggacaagtcgggaaaggcattcatgattcatataagtatacttaactttgctattggcaacaattgtgcacttccagacagtttttaacctgaatggtgctagctatgactgccagtatttcttattgttttcagttacagctttccacataggtttgatgagaaaagattttatcataaccaacacaagctagtctggattctgatggcaattgacttacatacgaatggaattacatgccccccaaattactacataaatcagtagaatgatttgtcttggactgtatctcatttgtagtagtcatgtttagcatgccaacttgtcttcatatttttttgcttcaacatttcataggttgaggcggtggatgggcattcaattttgctttctggagtagatttggttgatggcacggtaccatattaagtgcttatgttctccagcagtacataatgaattgacatgattcagcatgcctcacatgaaccttcctaatatgctcctctatctacagcccgtgcttgatatcaaaccgtatctgccatattctgatggtgttaaaggtgcagctattcctaattggttagaggtacatactatatatttctttctagaaaaatatttgttcagcacatttctcctatctatttataaggggcactgacccaacatgactggagatatgtatagtgtggtgttttacccttaggtagttgcattcatttctcattttcagaaacttatcttttgtgaaattgtagataggactgaatcttgagaatctattgttctattttgtttaggtactgtgggttgaaagctcactggttcagtacttcagtttgcacaactaacttttttgtgatcttgtgaaagtagcatcctatagttcattttctacttagaaccatctcaactgcaggctcgcttgtttagcttttgaggcaacactataaatggtttactcttggatcgcctggtttgtccaccaccaactaattttgagtattatcttccaatcaggttgacggtgcattagctgtggagtctatccacttttctgagcacttcatttcttcactttctgattgctggatgcatgtagtaagtaaaatttgctgcttcttactgcagtatgacatggcagatttttatgtcagctgaacagcaaactacaaacatctaacttacattcaaattttgtttacttcagaaaaagcaatcactctacgcttcagcagatgagtttcaggatcttgtcaaggaagtgctctcctgggacatcaggtcgctgtctcagcggatccgtccccatgatgtgaccataaaagatgtcactgataatggcggcagcaaaattgacaacggttgcagcaacgatgaggatcgccaatccgttgacccgtccactagcgtggtctaccaccttcatctagaaggcattgatgtgtcatacagaattgaccaagattccaacattgttgttgagaatgcagcccttctctccagtgctgtgaaccaacaccggtacagctacttaacatggagggaaaaggtaagcattttgtaggagcatatattagagctcattatctgaaaaacaaatagagctcatgcagtaaactgtatgcatgaaaaaaatatatattagagctaattaccatggagtaaagctgtatgcaatcttatgaaattctactctaaaatgtcatgaggtcaatggattctctagcttttctcatttaaagaaagaatttgagagtgtttctctttcag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0428900, RefSeq:Os09g0428900