Os08g0415600

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0415600| Description = U box domain containing protein| Version = NM_001068341.2 GI:297608587 GeneID:4345574| Length = 2031 bp| Definition...")
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Gene Name

Os08g0415600

Description

U box domain containing protein

Version

NM_001068341.2 GI:297608587 GeneID:4345574

Length

2031 bp

Definition

Oryza sativa Japonica Group Os08g0415600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19963396..19965426

Sequence Coding Region

19963396..19965426

Expression

GEO Profiles:Os08g0415600

Genome Context

<gbrowseImage1> name=NC_008401:19963396..19965426 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19963396..19965426 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggcggtgtgcccatgcgaggacatctcgcccgggacgctgctggcgtcgctcgccacgctttcggccgacgtcgccgacgggtgcgacgtggacaggctgccggcgctccggggcggcgtcggcgtggccgtgcgcgtcgccgggttgctccgggagttccttgaggaggtccggtgggcggcggcggcggagctccccggtggctctgtgctggggatgtccgagctgcacgtggcgttgcagaagatgcggttcttgctagaggattgcgggaggaagggggcgcggatgtgggtgctgatgaacgcggaggctgtggcgtcggagctgcgggtggtgctcggctcggtggcgacggcgatggacgtgctccccgccggcgtggtcgcggcgtccgacgacgccagggagttcgcggcgctggtgtcgcagcaggcgtggcgcgccgcggtgcggccggacgaggaggactcccgcgcggcacggagcgtgcggtcgatgctggcgcggttcaggagcggcgccacgccggacgccgaggacgcgaggctggtgctcggccgcgtcggcgtcgccagctggtgggactgctcccaggaggtgtccttcctcgaggccgagatgctcgagcggctggaggccggcggcgagaacgacaacgacctcgtgctcatcagcggcctcttgacgttcctgctctactgccgcgtcgtcctgttcgaccgcattgattacggcaaggctgatgagccggcgccggcgccggcgccgagggcggcgagctacttggcgcgaatcaatccggaggggctgcaatgcccgatcacgctggagctgatgactgatccggtgacattggccaccggccagacctacgaccgcgcgtcgatcaagcggtgggtgaagagcgggtgccggacgtgccccgtcaccggcgagaagctccgtagcgccgacgtcgtgccgaacgtcgcggtgcgcgggatcgtcgagcagctgctgctcagcagcggcgtctcgctccacgagccgagcagcaagcaccggtgcgcggtcgacaagacggcctcgccgttcggtgccgcggcggccggcggcgcgcgcctcgccgtggcgttcctcgtgtccaagctgtgccgtggcacgccggaggagcagaagaaggcgacgtacgagtgccggaagctgtcgaagcggaacgtgttccaccgggcgtgcctcgtcgacgccggcgccgtgccatggctgctccacctcctctcctccccggacgcctccgtccaggacaatgccgtggctggcctcctcaacctctccaagcaccccgccggcaggagggcgctcgtcgaggccggcgggctgggcctcatcgtcgacgccgtgagcgtggccgccaaggtggaggcgcagcagaacgcggcggccatcctgttctacctctcgtcggacgccggctactgcgatgagatcagccgcatcccggaggcgatcccgacgctggtccggctcgtgcgggagggcgcgtaccgcggccggaagaacgcgctggtgagcctctacggcgtgctccagcgcggcgcgggcggccacggcagggcggtgtccgccggcgccgtggcggcgctcgcgtccctgctgcccggcgaccgcgacgacctcgccaacgacgccgtcgcgctgctggcgaggctcgccgagcagcccgccggcgcggcggccgtcctctccagctcggcgctcgtcacgcggctcgtcgacttcctcggcgcgtcggcgtcgcggtcggccaaggaccactgcgcggcgctgctggcgtcgctgtgccggcacggcggcgacgcggtggtcgccctgctggggaagacgccggggctgatgccgtccctgtacgcgctcatcgccgacggcggcgcgcaggggagcaagaaggcgaggtggctcgtcaacgaaatccaccggcattacgagcagcggcagccgccggtggccgcgccgccggccggcgaccgtgtcattcgagtatag</cdnaseq>

Protein Sequence

<aaseq>MPAVCPCEDISPGTLLASLATLSADVADGCDVDRLPALRGGVGV AVRVAGLLREFLEEVRWAAAAELPGGSVLGMSELHVALQKMRFLLEDCGRKGARMWVL MNAEAVASELRVVLGSVATAMDVLPAGVVAASDDAREFAALVSQQAWRAAVRPDEEDS RAARSVRSMLARFRSGATPDAEDARLVLGRVGVASWWDCSQEVSFLEAEMLERLEAGG ENDNDLVLISGLLTFLLYCRVVLFDRIDYGKADEPAPAPAPRAASYLARINPEGLQCP ITLELMTDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPNVAVRGIVEQ LLLSSGVSLHEPSSKHRCAVDKTASPFGAAAAGGARLAVAFLVSKLCRGTPEEQKKAT YECRKLSKRNVFHRACLVDAGAVPWLLHLLSSPDASVQDNAVAGLLNLSKHPAGRRAL VEAGGLGLIVDAVSVAAKVEAQQNAAAILFYLSSDAGYCDEISRIPEAIPTLVRLVRE GAYRGRKNALVSLYGVLQRGAGGHGRAVSAGAVAALASLLPGDRDDLANDAVALLARL AEQPAGAAAVLSSSALVTRLVDFLGASASRSAKDHCAALLASLCRHGGDAVVALLGKT PGLMPSLYALIADGGAQGSKKARWLVNEIHRHYEQRQPPVAAPPAGDRVIRV</aaseq>

Gene Sequence

<dnaseqindica>1..2031#atgccggcggtgtgcccatgcgaggacatctcgcccgggacgctgctggcgtcgctcgccacgctttcggccgacgtcgccgacgggtgcgacgtggacaggctgccggcgctccggggcggcgtcggcgtggccgtgcgcgtcgccgggttgctccgggagttccttgaggaggtccggtgggcggcggcggcggagctccccggtggctctgtgctggggatgtccgagctgcacgtggcgttgcagaagatgcggttcttgctagaggattgcgggaggaagggggcgcggatgtgggtgctgatgaacgcggaggctgtggcgtcggagctgcgggtggtgctcggctcggtggcgacggcgatggacgtgctccccgccggcgtggtcgcggcgtccgacgacgccagggagttcgcggcgctggtgtcgcagcaggcgtggcgcgccgcggtgcggccggacgaggaggactcccgcgcggcacggagcgtgcggtcgatgctggcgcggttcaggagcggcgccacgccggacgccgaggacgcgaggctggtgctcggccgcgtcggcgtcgccagctggtgggactgctcccaggaggtgtccttcctcgaggccgagatgctcgagcggctggaggccggcggcgagaacgacaacgacctcgtgctcatcagcggcctcttgacgttcctgctctactgccgcgtcgtcctgttcgaccgcattgattacggcaaggctgatgagccggcgccggcgccggcgccgagggcggcgagctacttggcgcgaatcaatccggaggggctgcaatgcccgatcacgctggagctgatgactgatccggtgacattggccaccggccagacctacgaccgcgcgtcgatcaagcggtgggtgaagagcgggtgccggacgtgccccgtcaccggcgagaagctccgtagcgccgacgtcgtgccgaacgtcgcggtgcgcgggatcgtcgagcagctgctgctcagcagcggcgtctcgctccacgagccgagcagcaagcaccggtgcgcggtcgacaagacggcctcgccgttcggtgccgcggcggccggcggcgcgcgcctcgccgtggcgttcctcgtgtccaagctgtgccgtggcacgccggaggagcagaagaaggcgacgtacgagtgccggaagctgtcgaagcggaacgtgttccaccgggcgtgcctcgtcgacgccggcgccgtgccatggctgctccacctcctctcctccccggacgcctccgtccaggacaatgccgtggctggcctcctcaacctctccaagcaccccgccggcaggagggcgctcgtcgaggccggcgggctgggcctcatcgtcgacgccgtgagcgtggccgccaaggtggaggcgcagcagaacgcggcggccatcctgttctacctctcgtcggacgccggctactgcgatgagatcagccgcatcccggaggcgatcccgacgctggtccggctcgtgcgggagggcgcgtaccgcggccggaagaacgcgctggtgagcctctacggcgtgctccagcgcggcgcgggcggccacggcagggcggtgtccgccggcgccgtggcggcgctcgcgtccctgctgcccggcgaccgcgacgacctcgccaacgacgccgtcgcgctgctggcgaggctcgccgagcagcccgccggcgcggcggccgtcctctccagctcggcgctcgtcacgcggctcgtcgacttcctcggcgcgtcggcgtcgcggtcggccaaggaccactgcgcggcgctgctggcgtcgctgtgccggcacggcggcgacgcggtggtcgccctgctggggaagacgccggggctgatgccgtccctgtacgcgctcatcgccgacggcggcgcgcaggggagcaagaaggcgaggtggctcgtcaacgaaatccaccggcattacgagcagcggcagccgccggtggccgcgccgccggccggcgaccgtgtcattcgagtatag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0415600, RefSeq:Os08g0415600