Os08g0416000

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0416000| Description = Homeodomain leucine zipper protein| Version = NM_001068342.1 GI:115476421 GeneID:4345576| Length = 3994 bp| Definit...")
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Gene Name

Os08g0416000

Description

Homeodomain leucine zipper protein

Version

NM_001068342.1 GI:115476421 GeneID:4345576

Length

3994 bp

Definition

Oryza sativa Japonica Group Os08g0416000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19972086..19976079

Sequence Coding Region

19972338..19972865,19975280..19975683,19975752..19975869

Expression

GEO Profiles:Os08g0416000

Genome Context

<gbrowseImage1> name=NC_008401:19972086..19976079 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19972086..19976079 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcccggccgcgtcgtgttcgactccggcgtggcgcggcgggcgtgccccggcggcgcgcagatgcttctcttcggcggcggcggcagcgccaacagcggcggcttcttccgaggcgtgccggcggcggtgctggggatggatgaatcgcggtcgtcgtcgtcggcggcgggggcgggggcgaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagcaggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggaggagaacaagctggagccggagcggaagacggagctcgcccgccgcctcggcatggccccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcacgacttcgaccgcctcaaggccgcctacgacgccctcgccgccgaccaccatgccctcctctccgacaacgaccgcctccgcgcgcaggtaatctcattaaccgagaagctgcaagacaaggagacgtcgccgtcgtcggcgaccatcaccaccgcggcgcaggaggtcgaccagccggacgaacacacggaggccgcgtcaaccaccggcttcgccaccgtcgacggcgcattggcggcgccaccgcccggccaccagcagccgccgcataaagatgatcttgtgagcagcggcggcaccaacgacgacggcgatggcggcgcggccgtggtggtcttcgacgtcaccgagggcgccaacgaccgcctcagctgcgagtcggcgtacttcgccgacgccgcggaggcgtacgagcgcgactgcgccgggcactacgccctctcgtcggaggaggaggacggcggcgcggtcagcgacgagggctgcagcttcgacctccccgacgccgccgccgccgccgccgccatgttcggcgccgccggagttgtgcaccacgacgccgcggacgacgaggaggcgcagctcggcagctggaccgcctggttctggagctga</cdnaseq>

Protein Sequence

<aaseq>MDPGRVVFDSGVARRACPGGAQMLLFGGGGSANSGGFFRGVPAA VLGMDESRSSSSAAGAGAKRPFFTTHEELLEEEYYDEQAPEKKRRLTAEQVQMLERSF EEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAAD HHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAAQEVDQPDEHTEAASTTGFAT VDGALAAPPPGHQQPPHKDDLVSSGGTNDDGDGGAAVVVFDVTEGANDRLSCESAYFA DAAEAYERDCAGHYALSSEEEDGGAVSDEGCSFDLPDAAAAAAAMFGAAGVVHHDAAD DEEAQLGSWTAWFWS</aaseq>

Gene Sequence

<dnaseqindica>3215..3742#397..800#211..328#agacgtcgacgcgcatgctgtggagcaccagcttcttccgccataaggtcgcctcctccttctaagcccacgccctctcgggcggcggcggcgagccggcggcggagcgcgcggttggtaggtgcgcgtgcgtgcgtgaacgggagagcagcttcgagatcgggttttcttgggttcttggagaagggaggagaagagggggaggagagcatggatcccggccgcgtcgtgttcgactccggcgtggcgcggcgggcgtgccccggcggcgcgcagatgcttctcttcggcggcggcggcagcgccaacagcggcggcttcttccgaggtaaacagagatccaatagagatcgtcgtcgtctccgtctcaggcgagtgacgcgtgttataacgcaggcgtgccggcggcggtgctggggatggatgaatcgcggtcgtcgtcgtcggcggcgggggcgggggcgaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagcaggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggaggagaacaagctggagccggagcggaagacggagctcgcccgccgcctcggcatggccccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcacgacttcgaccgcctcaaggccgcctacgacgccctcgccgccgaccaccatgccctcctctccgacaacgaccgcctccgcgcgcaggtctcccactgatttttttcacccttctcaattaattaattaccgcagttaatttcttgtgatcgaaggaccgctcttttaaaattcgaacaagttcgggggcttcggtgcaaaatggtagtaccgtagtttaattttgtaaaaatagccccccccccccccccccttttgtaaaaatacaaccgcacttgtaaaataagattccactttttggcgccttttcattggatagcgatcagcggcgacccacaactcgatgcgtttttttaagtttttttttaaatcaaactttttaaacagtggttaggaatctaacgaacatatttatgctcgtttcccaaagtctaagcaccgctaatctaagcagcacatgcatatttctcttaattttttttagaatatcctgacgactagatgtactctttgttttgttttttctcagctcgtgtaatcacgtgaattcatatggttgctccgtttcacagttggctactgcttcagccgcggtcaaattttgaaatttagagcttatttttagaattaatttagagattgtttcgtctttgtcagccttcagccttggcttttaaacgctaaaactattttttttcagcgtaggtcaagtgccttttaacttgtaacccacaaagaagaaaaaaagaagcctttcaagctggtgggtatttcaccaagctagaacagatgtttatttgtccaatcactttgtttttttgttaatatcatgttcatgtaaaaaataaggcaaaaatgtatttttgttcaaattactaggcagagcttcgtgagtttagtttagttttttttagggtcttgagtttagttgcaacaatggtgaaagcatcatccttattttttcaattagaagttgcaaaaatggtgaaagcatcatctttatttttttcaattagaagttgttgatctaaattctagagcatgttattttcttagtgaggaagagaagtagagaacatcataatttgaggaatttcttatcttgatataaggagtgaccatgcattcatgtttttcctcagcgggtgcacatttggttaagattgtcatcgtttattatcagcaagcgatatatattctgtatcaaatccagggaatctacaataaacccacctaacatgttgttagagggggcttgattctgttagctgtgtcatactgttggattagcaaccgcaaactagcatgttcttgctatcccagtagtataaacttgggcacttggaatctcaacggtggttcaatagttgatcattgatcaaaactcaaattaaaactggttagactatggttcacatgcatggatgtaaaattcatgtcactccagatgtactccctccattccaaaaaaagacaattgtctagattcattgtattaggaggggtcccttcttaggttggctttttttagacggagggagtacgtcccaggacagatataccgaaggacaggaattatgtactgtgagattgactttggagaacatagaagcagtacatgataagaaatgaaagagtcaaccagggaaattttgaaaataccattaacatttttcttgcatagtactagcattaatttctttaaagtccactaaacaccaacaaaaaaaaagtaaaaatgaactaggatactgaattagttcaccttcactttgcattttgcaacaagaaaaatagtagatctagctattcttcaggtgcttcacacaagtcatttttgtgtaatgcctcgagttgtacacgagcatcacatggtgtgtcttagactagacttcacgaatcttgaggctagatcacacacatgcctgcatgtaccttggccggtggatcagattgagacagcgatgccggccaagtgatcagcatatatgcttacattgggggtacagtgtcagcattggatcccaatgacttcttgcaaaacctatgacataactgcatattcataggaaatgatatcatgccttgagcattatcagcaggggcggatctacagtagtatgagcggtgtcaggcgacaccgacgactttcggcaaaatctatagcgaaactgcttatccacatattataacactataatctaaatataattaacatactatgacaccgatagacacgttatgacactaacgaatcgattttctggatccgccactgattatcagtaattcagtatattgtgacaccggcagggtttagtattttggtttaagattttgggaatttcggatcccctggcatgaaactatttctcctgaatttacttcagatttttgtgaatttaccataatttgatcaaattcagccaaaatctttccaaatttcaaaaatgttgcccccctttctgaatagtccctcactgtaatgcttaatgtcacaggtaatctcattaaccgagaagctgcaagacaaggagacgtcgccgtcgtcggcgaccatcaccaccgcggcgcaggaggtcgaccagccggacgaacacacggaggccgcgtcaaccaccggcttcgccaccgtcgacggcgcattggcggcgccaccgcccggccaccagcagccgccgcataaagatgatcttgtgagcagcggcggcaccaacgacgacggcgatggcggcgcggccgtggtggtcttcgacgtcaccgagggcgccaacgaccgcctcagctgcgagtcggcgtacttcgccgacgccgcggaggcgtacgagcgcgactgcgccgggcactacgccctctcgtcggaggaggaggacggcggcgcggtcagcgacgagggctgcagcttcgacctccccgacgccgccgccgccgccgccgccatgttcggcgccgccggagttgtgcaccacgacgccgcggacgacgaggaggcgcagctcggcagctggaccgcctggttctggagctgatcgatggaagcatggagcattggagccatgctatcaatgaatgaatgaatcaaatgaccttgagaccctcctctccgtcctttcttttgccctatttttaatcgctgttatatgttaattatgtgcaattaaagtgtacgtgttttgtcgtaagttgtgtttgttcaaattgtatgttttgaaggtgtcatgtattcatacacgatatgatatatagacgggatcatgaatgatactcggaaagattggaat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0416000, RefSeq:Os08g0416000