Os09g0121600
| Gene Name |
Os09g0121600 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001069132.2 GI:297609053 GeneID:4346424 |
| Length |
6188 bp |
| Definition |
Oryza sativa Japonica Group Os09g0121600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:1652307..1658494 |
| Sequence Coding Region |
1652307..1652320,1656724..1656949,1657442..1658494 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:1652307..1658494 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:1652307..1658494 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcagagacatggggctggtggcgaggagccgacgtcaggtgagcaatcaccgcatctcagtggggatcgcgacacggagctggaaaccggctcaccagcaggcatcgacaatgactacctggacgctgaccacgatgatgatgccccactccggttctgcagcatcaacgacatcatcgggccagcctcgccatgtggcttcgcaccatgtgcattggtggcggaggagctgtatgcatcactcggtttcaagaggagtccatcggagcacgccatctatgtcaggcggaacggcaacgcacagctggtggtcggggtctacgtcgacgacctcatgatcactggctccaactacgacgacatcaggcaattcaagaaggagatggctgctgcattcaagatgagcgatctcggtcaacttcactactacctgagcattgaggtgaagcagagcgcaagtggaattttgctcagccaaggagcttatgctaccaagaacctggagaagtgtggcatggaagggtgcaatcaatgtcaagtgcccatggagacacggttaaagcggagcaagttcagctcggagccgtcggtcgacgcgacggcatatagaagcatcgtcaggagcctgaggtacctggttaacacctgtcttgatcttgcttttgctgttgggtatgctagccggttcttggaagatccacgagaggaccatctcgctgctgtgaagcacatcctacactacgtggcgggaaccaagaatttgggagtttggttcagcaggaaggtggaaaaggaggcgtacctgagggggttcagtgacagcggttatgctggtgatgtcgatgctaggaagagcatgactggggtgattttcttcctcggcagcagcccaatcacttggcaatccatgaagcagaaggtggtggtgcagtcaagctgtgaggtggaatacatagtagccgcaaatgctgcttgtcaggcattgtggcttgctcgtgtgctggcagaagtgcaaggatcgacaccgagagcgccaatgctaagggtggacaacaagtctgccatttccttgaccaaaaatccagtactccatggacagagtaagcacattcaagtgaagtatcatctagcccgggaggctgcggaaaatggcctgatcaatgtggagttcatcaggagcgaagaacagctgggcaacattctgacgaagctgctgggcaagaccaagttccatgagctacgttcaaagatcggcctgatcaacatcagtaatgagcacagcaagtcttag</cdnaseq> |
| Protein Sequence |
<aaseq>MQRHGAGGEEPTSGEQSPHLSGDRDTELETGSPAGIDNDYLDAD HDDDAPLRFCSINDIIGPASPCGFAPCALVAEELYASLGFKRSPSEHAIYVRRNGNAQ LVVGVYVDDLMITGSNYDDIRQFKKEMAAAFKMSDLGQLHYYLSIEVKQSASGILLSQ GAYATKNLEKCGMEGCNQCQVPMETRLKRSKFSSEPSVDATAYRSIVRSLRYLVNTCL DLAFAVGYASRFLEDPREDHLAAVKHILHYVAGTKNLGVWFSRKVEKEAYLRGFSDSG YAGDVDARKSMTGVIFFLGSSPITWQSMKQKVVVQSSCEVEYIVAANAACQALWLARV LAEVQGSTPRAPMLRVDNKSAISLTKNPVLHGQSKHIQVKYHLAREAAENGLINVEFI RSEEQLGNILTKLLGKTKFHELRSKIGLINISNEHSKS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..14#4418..4643#5136..6188#atgcagagacatgggtcctggacactgttgccaacaaccacatgtcgggatctgttggcggctgttaagtgctaaattcatacggctaatacctgcataaaactcagataataagacatccaacatagtgataggatttatttctaacatattccacaagtgttggtgtttatttgatgcaggtcataaaccaccaaagttgggagggaaatcagactaaagtgaagaaagaacccatccatacaagagatgggctttagactacatcaaaatactagagaatcagcccaaaattgcaagaaacagataattagagcaagaagcatccacaggccaaattctgggcctgttgggccatgccagggttcggccgaacccatctctccaccattgatctcgtggtttggcgtggacgtcccagatacattcttgatgacggttggagggcacttcggacattttccgttccacaaccgtcattacctgcctatttaagagcttcactccttcactctcaacacatattttcaagcttgagctgaattataagaggctctattgtactattttgtatactagaattaggaagagagtagagtagaagaagtcggaggaattccggagttgtcggtaatcctctcctgtttcttttattctgttaattactctgctttcaatataattatctttctgagtaatttagatttacttgtgagaattacctcttggttagtacctaatcatcatacgggattattgtttgctataatcaactaaaatatagtgattgctttagtgagttataaacactagaagagtatatattaattgcttagacgtggtgtttaggtaatcaatagctagtaattgctgcgtatcccacagtatgtttgaggtgggtgtagaggtggcacttaagtcctccctacctgggtacgtagtagagcgacatttgggaacaatgttgccagtgcctggagtattgcattaggattaaaattaagctttctgtagacactgtttctcactaggaaatcttctctatcctttgcccaccttagcttagtgtccttgggtgaacctgataaggaagtaatacctgtttcctgtggaaatcgatacctgagaatactcctaggtgaagtgctacatcggtatcttccgtgcgcttgcggattttatctgtaatgttaagaaataccaacaggatcccgagcggcgttcgcgaagctggacacggcggtgcttgggccggtgcgcttcggcgacgactcgatggcatggatcgagggccgcgggaccatcgtgtttgtgtgcaagaatggagagctccgatcgttctctgacatctactatatcccacgattgacgacgaacatgtgagcgtcgggtagctcgatgaggcccggtgcaaggtcgacatcgatgacagcgtgatgtggattcgggagccctaccaacggttgctggcgaaggtaaagcgcacggcaaactggctgtacatgctccacatcaagttggcatagccgtcgtgcctggcgctgcatgggcatggtgacgaggtggcatggtgctggcatgagcgcttcggagacgtcaacatggcagcgctacggaagctagcctgggaggagttggtgcagggatcgctggagatcgggcagctcgagcagctgtgcgaggcgtgccaagccgggaaacaacgacgtaccttgtttcctgtgcaggccgagtaccgtgcacgacagctgttggagctggtgcacggcgacttgtgcggtccaatcacgccggcgacaccatgggggaacaagtatttcctgctgttggtggacgaccttagccgatacatgtgggtagccgcgattccttcaaaggattgtgcagcggctgccgtcaaggacacccaggcgtgtgcagaaggcgaatccggacgaaagctcaagggactctgtactgatcgcggaggtgaattcacctcgatcgagttcgtggagtactgtgtagctgaaagcatacatctaaagtggctttgggagaggtacatgaaggaatttgtggaactcatcaatcggttgcttaggagagcggggttctattggccgaggatgattgaagattgcttcaaatattataggggatgcgaagcatgtcaacgattcggcaatgttcaattggcgcccgccgccgtgttgaatcctatcatcaaaccaaggccattccgaggttgggctttggatttcattggtcaaatttatcctccgtcatcaaaggggcataggttcgtactagttgcaacggattacttcaccaagtgggccaaagccatgccgctcaagaatttgactcatacggaggtaattgactttattttgaagcatattatctatagattagttattccgcaaacattgactacagatcaaggagcttcttttatatctaaggaagtgaagagttttaccgaatcttatggtattaaattgttgagttcttctccttactacgctcaggctaatggacaagccgagtccaataataagacgttgaaattagtcaaaaagaagatcgaggaacacccaaagaagtggcatgaagtgctttctgaggcattgtgggcgcataggatatctaaacttggtgccactaaagtcactccttttgagagtatttatggtcaagaagccattttgccggttgaggtgaatcttggctctcttcggtatatcaagcaagatgatttatcaagtgaagactacaagaccttgctgggagacaatcttgatgaagtcatcgacaagcgcttgaaggctttggaagagatagagaaagagaagaagagggtggccaaggcatacaacaaaagggtgaaagcaaagttatttcaagttggagacttggtttgaaaaacaattttgcctttggttcctcgatccagagagttcggtaaatggtctcctagttgggagggtccttattgggtatgcggcattgttcgggggaacatgtattttttggagacacttcaaggagagcgtttttagcgagcaatcaatgggaaatacttgaagaaatacttcctgagcgtttggcaagatgcttaggaagtcctatggcccggtaattggattatcaccctaagaccaaaagatgttctatgcttttagattcaccttgttcatcaaaaaggtaggggggcatgtgtttacactcaaatttggcacctaggaataaaatagggaaagttgccaaagtttggaagtctactggtgttttcctctggaggacggtctgaccgccgtgtataggcctgtcagaccacggcttgaactccggtcagacaagtggtgtgtggtcggtctgaccggcagagtccaagtccaggactgtttcgtcgggtcacgaggtttccttgctcgggaaggcatatttcgggtttcctttggattctatcccgagttggacgtggaggagggcctatagagggcaagaccaacctatatttaagggacatggccggttcattgtaaaaatcaatcaactatcaatcaatcgaatcgttcttttacttttgcttctagttctagtttagtttgtccatctttgtcgatttgcgccgtaactcgtccgacgccgctgcgagattgcgacacctctttgtaggtttgtcctgaaaaccttcccacgagacgagtagctatccatcgttctacctagaatcggctccgctagccggtttagttatcaaaacccatcttggtttagctttggctagattgaggtggttggcgactctgagatcgccgcaaggcgtttaggtgctgcgatcgtgcttgtcaacttgtcacaaaaagttgccaacaactgcgccctacagctcgcagcagaatggcgtcgtcgagcgccgaaacgacatggtggtggtgacgacaaggagcatgctcaagttgaagggactgcccggatggttctagggagaggcggtaagcacagctgtgtatgtgctgaacaggtgttcgacgaagagcgtggacggcatgatcccgttcgagacgtggcacaggaagaagccggcagtacaccacctgcagatgttcggctgcatcatctacatccggaacacaacgccgcacctgacgaagctcgaggatcgtggccgcaagatgatcttcgtcggctacgagtgtgggtctaaggcgtactgcgcctacgatcccgtcacaaagcgtgttcatgtgatgcgtgacgtggtgttcgatgagcaagcccagtgggactggggcactagcagcgatgatggagagctaggtggtggcgacaacatcttcacggtggagtactccactatggagccgacagcctcagtggtttatggtgccactgcagagccgggggagtagttgccgcatcctggcagggctggtggcgaggagccgacgtcaggtgagcaatcaccgcatctcagtggggatcgcgacacggagctggaaaccggctcaccagcaggcatcgacaatgactacctggacgctgaccacgatgatgatgccccactccggttctgcagcatcaacgacatcatcgggccagcctcgccatgtggcttcgcaccatgtgcattggtggcggaggagctgtatgcagtgagctctgatgagcttgccttgttcgatgaggcagagcgattgatggcgaagatggaagcgattgaagacaacaagacttggtcgctggcggatcttccacctggtcgatgtgcgattgggttgaaatgggtgttcatggtgaagagggatgagcatggagcagtgtgcaagcacaaggcgcgtctcgtggtgaagggctatgcgcaacggcaaggcatcgactacgacgagctgtttgctccggtggcgcggttggactcggtgcacctgctcatcgccctcgcggcgcacaaggggtgggagctggaccatatggacgtcaagtatgcgttcctcaatggggacctgcaggaagagttctatgtggagcagccggccgggttcgtcatcgccgacaaggagcacaaggtgctcaagctacggaaggcgttgtacgggctgcatcaagcaccgcgcgcctggaacgcgaagctggacaacacactgcagtcactcggtttcaagaggagtccatcggagcacgccatctatgtcaggcggaacggcaacgcacagctggtggtcggggtctacgtcgacgacctcatgatcactggctccaactacgacgacatcaggcaattcaagaaggagatggctgctgcattcaagatgagcgatctcggtcaacttcactactacctgagcattgaggtgaagcagagcgcaagtggaattttgctcagccaaggagcttatgctaccaagaacctggagaagtgtggcatggaagggtgcaatcaatgtcaagtgcccatggagacacggttaaagcggagcaagttcagctcggagccgtcggtcgacgcgacggcatatagaagcatcgtcaggagcctgaggtacctggttaacacctgtcttgatcttgcttttgctgttgggtatgctagccggttcttggaagatccacgagaggaccatctcgctgctgtgaagcacatcctacactacgtggcgggaaccaagaatttgggagtttggttcagcaggaaggtggaaaaggaggcgtacctgagggggttcagtgacagcggttatgctggtgatgtcgatgctaggaagagcatgactggggtgattttcttcctcggcagcagcccaatcacttggcaatccatgaagcagaaggtggtggtgcagtcaagctgtgaggtggaatacatagtagccgcaaatgctgcttgtcaggcattgtggcttgctcgtgtgctggcagaagtgcaaggatcgacaccgagagcgccaatgctaagggtggacaacaagtctgccatttccttgaccaaaaatccagtactccatggacagagtaagcacattcaagtgaagtatcatctagcccgggaggctgcggaaaatggcctgatcaatgtggagttcatcaggagcgaagaacagctgggcaacattctgacgaagctgctgggcaagaccaagttccatgagctacgttcaaagatcggcctgatcaacatcagtaatgagcacagcaagtcttag</dnaseqindica> 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