Os08g0417100

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0417100| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001068348.1 GI:115476433 GeneID:4345583| Length = 1157 ...")
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Gene Name

Os08g0417100

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001068348.1 GI:115476433 GeneID:4345583

Length

1157 bp

Definition

Oryza sativa Japonica Group Os08g0417100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20043016..20044172

Sequence Coding Region

20043016..20043276,20043368..20043749,20043820..20044172

Expression

GEO Profiles:Os08g0417100

Genome Context

<gbrowseImage1> name=NC_008401:20043016..20044172 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20043016..20044172 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcgatccccaaggtggacctacgcgggctcgagccggggacgccggggtgggaggcggcccgggccacggtgaccgcgtccatggtgtcgcacggctgcgtcgtggtcgcgcacggcgagctcggggcggatctccgggaggcgctgttcggccgcgccgtgcgggaggcgttcgcgctccccgccgaggccaagcggcggaacgtgtccacggtggggccttacagggggtacatcgccaacatccccgggatggactgggagagcctccgcgtccacgacgccgacgacgccgcccgcgtccgcgagttcgccggcctcctctggccggagggcaacccggaagtcagagctcgatttctcatgggggattgggggggtgttcgtccgggggattgcagtgagacgatcgtgtcgttcgccacgaagatgagggatctggagcggacggtggagaggatgaccctggagggcctcggcgtcggggaggaccacatcgcctcgcacctcgccgcgcaggactacggcgtccggctgtcccactacggcccgccgccggacgcgtcgaccgccatctccctgcaggcgcaccgcgacgacagcatgaccaccatcatcgtgcagcacgaggtggagggcctcgaggtgcaggccggcgacgggagctggcacgccatcccccccgagcccgacaccatcgccatcgtcgccggcgagctgttcagggtggtgacgaacgggcgggtgccggcgagcgtgcaccgcgtgaggacgccgagcgggcgggagcggtactgcgtgctggtcggcagccggagcaaggacggcgcggtgctgagcgccatggacgagctcgtcgacggcgagcacccgctggcgtacaggccgtgcaaggcggaggagttcatccagttccgctactcggaggaaggccgcaaattcagcgacccactcaaggcgttctgcggagtaaacgctacagaatga</cdnaseq>

Protein Sequence

<aaseq>MAMAIPKVDLRGLEPGTPGWEAARATVTASMVSHGCVVVAHGEL GADLREALFGRAVREAFALPAEAKRRNVSTVGPYRGYIANIPGMDWESLRVHDADDAA RVREFAGLLWPEGNPEVRARFLMGDWGGVRPGDCSETIVSFATKMRDLERTVERMTLE GLGVGEDHIASHLAAQDYGVRLSHYGPPPDASTAISLQAHRDDSMTTIIVQHEVEGLE VQAGDGSWHAIPPEPDTIAIVAGELFRVVTNGRVPASVHRVRTPSGRERYCVLVGSRS KDGAVLSAMDELVDGEHPLAYRPCKAEEFIQFRYSEEGRKFSDPLKAFCGVNATE</aaseq>

Gene Sequence

<dnaseqindica>897..1157#424..805#1..353#atggcgatggcgatccccaaggtggacctacgcgggctcgagccggggacgccggggtgggaggcggcccgggccacggtgaccgcgtccatggtgtcgcacggctgcgtcgtggtcgcgcacggcgagctcggggcggatctccgggaggcgctgttcggccgcgccgtgcgggaggcgttcgcgctccccgccgaggccaagcggcggaacgtgtccacggtggggccttacagggggtacatcgccaacatccccgggatggactgggagagcctccgcgtccacgacgccgacgacgccgcccgcgtccgcgagttcgccggcctcctctggccggagggcaacccggagttctggtaaggccagctgcctcttcgcggcctcgccgccatgttcgccagccatgttcttgctcctcagagtcagagctcgatttctcatgggggattgggggggtgttcgtccgggggattgcagtgagacgatcgtgtcgttcgccacgaagatgagggatctggagcggacggtggagaggatgaccctggagggcctcggcgtcggggaggaccacatcgcctcgcacctcgccgcgcaggactacggcgtccggctgtcccactacggcccgccgccggacgcgtcgaccgccatctccctgcaggcgcaccgcgacgacagcatgaccaccatcatcgtgcagcacgaggtggagggcctcgaggtgcaggccggcgacgggagctggcacgccatcccccccgagcccgacaccatcgccatcgtcgccggcgagctgttcagggtacgcgccaaacgcaacgcaattcgccgtcggcgacacgttgatcttgaattcttgatcgatctctctctctctctctctcatggcgcaggtggtgacgaacgggcgggtgccggcgagcgtgcaccgcgtgaggacgccgagcgggcgggagcggtactgcgtgctggtcggcagccggagcaaggacggcgcggtgctgagcgccatggacgagctcgtcgacggcgagcacccgctggcgtacaggccgtgcaaggcggaggagttcatccagttccgctactcggaggaaggccgcaaattcagcgacccactcaaggcgttctgcggagtaaacgctacagaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0417100, RefSeq:Os08g0417100