Os08g0421100

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0421100| Description = Cyclin-like domain containing protein| Version = NM_001188654.1 GI:297726438 GeneID:9272445| Length = 4955 bp| Defi...")
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Gene Name

Os08g0421100

Description

Cyclin-like domain containing protein

Version

NM_001188654.1 GI:297726438 GeneID:9272445

Length

4955 bp

Definition

Oryza sativa Japonica Group Os08g0421100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20243994..20248948

Sequence Coding Region

20243994..20244164,20244377..20244439,20244692..20244871,20248271..20248357,20248574..20248948

Expression

GEO Profiles:Os08g0421100

Genome Context

<gbrowseImage1> name=NC_008401:20243994..20248948 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20243994..20248948 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgccggcgaccgccgccagcggcggcggcgacgacgacgacagagacgtcgtgttcgagtacctcctttgcacggaggaggacgccgcctcggccgggtccttcttccagcagctacagggcccggcgcccgccgtgtcgtcgtcgccatcaacgacgacggcgacggcgccggctgctgctggtagctgcgatgatggcggagaggaggaggaggaggaggtgtggacggtcgacgtcgtcgcggagctcatcggcggcgaggccgagcgctcgcactcgccgcgggcggactaccccggccgcctccggtccggccgccccgccgacctcgccgcccgcgccgactccgtcgcgtggatcctgaaggtgagagagttgtacggtatgcttccggtgacggcctacctcgccgtcagctacatggaccgcttcctctccctccaccgtctcccgatggaggatgcaagatacatatttgagcatcggacaatttttcggatggagcttctagtccttgatgcgctagattggaggcttcgatcgataacacccttcactttcatgtacttgtttgctgacaaggtcgatccaaatggcaagcacatcagggaattgatccatcaagccactcaaacactgagttcttggatcactgcccatcatccatcgcagcagcagcagtgctatgcgcctccagaagcaatcatcaggtgctaccggctaatgcagcaattgatatctagtaacaatgttgggagagaatcgacagagataacaatggcgacgacgacgacgacggcgacaactgctgtgagctcagaggaggttgtgtcctcttctcccccatcaaagaggaggaagatgtga</cdnaseq>

Protein Sequence

<aaseq>MGAPATAASGGGDDDDRDVVFEYLLCTEEDAASAGSFFQQLQGP APAVSSSPSTTTATAPAAAGSCDDGGEEEEEEVWTVDVVAELIGGEAERSHSPRADYP GRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLPMEDARY IFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQTLSS WITAHHPSQQQQCYAPPEAIIRCYRLMQQLISSNNVGRESTEITMATTTTTATTAVSS EEVVSSSPPSKRRKM</aaseq>

Gene Sequence

<dnaseqindica>4785..4955#4510..4572#4078..4257#592..678#1..375#atgggggcgccggcgaccgccgccagcggcggcggcgacgacgacgacagagacgtcgtgttcgagtacctcctttgcacggaggaggacgccgcctcggccgggtccttcttccagcagctacagggcccggcgcccgccgtgtcgtcgtcgccatcaacgacgacggcgacggcgccggctgctgctggtagctgcgatgatggcggagaggaggaggaggaggaggtgtggacggtcgacgtcgtcgcggagctcatcggcggcgaggccgagcgctcgcactcgccgcgggcggactaccccggccgcctccggtccggccgccccgccgacctcgccgcccgcgccgactccgtcgcgtggatcctgaaggtgattttaaacctgattaggagtactaataatcctaattaaattaaacctcagtaactactccctttctgcttacattcacatagatacgagtgaatatgagaaatgctagaatgacttatagtgtgaaacagagcaaataatggacaaagtgtatgaggattaattaatacaaaacacaaattattagcagtaattaataatacttgtgtgcaggtgagagagttgtacggtatgcttccggtgacggcctacctcgccgtcagctacatggaccgcttcctctccctccaccgtctcccggtacgtatcttatacgtgcgtatatacgtacattttgtacgtgtgagttaatcattatctcaacccatgcatatggttcgttttgggctgtgtatatctttctaagtagaggccgggttaatataatccattatctgctggactgtcgtatatatgtatgtatgtacgtgcgcggtgtgcgtaccctgcatatgtatcgtccatcttaaagtatactccctctatttttttaatatatgacgttgatttttgttatagcctttgatcattcgtcttatttaaaaaatttgtacaaatcttaaaaatatgaataatgcttaaagttcagttagcgataaatcaaaccacaacaaaataatagaaatttactttaaatttgttaataagacgaattgtcaaatattatataaaaagttaacgaagatatacacacacacaattttgcgtggtttattgtctacaagtaattaagttgaatataatgtcatagaagtaggatgttcggcaataaatttagtctaagtttaatggtctaagaactaataaattttactgaaaattctaagtttaattggctttagagcatgttcataggtaaagccttccatttagatactattgtagacgataaaagctctaactaaaataaatttgtattaattacctttctttcattttccctattcccatatagtaaaattttctttcacaaacgttagaagttcatattaagatgttcagcttaatatcgatttttctctctcgttttccctctcctcttcatgtcaacaatttaccttattttccccaaaaaaaaacaaattaccttattaacaactggagtataaaacctgttattatttgttgttgtacatgctcatatatgtgtacgcgccacgcatgtctttttaagtttggagatagttgcttaggtaggtcaattaaacaattctcagttaagataattttggttgagtgagcactcgaaagtcgggacattgaaattggattaattagcttgcggaccgtactttgattaggccaatcatgagttcattttcttttctagtttaggtatacatgggcacttcacgtgcgcacgcacgaatttttttatttgttgaacctttttacttttttattttaaaactaaactcttttgaaatttatttgtaaatctgaaccttttgaccacgccagctcgacaaaacaacactggcaagccacctgcagcgaatatatcagttttgtcctgccacgtcagcgagagtggcgtggctaaataacgatgccatgccgtggacaaataacgctatcacgccagcaggagcagcgtggcggtataattttgccacgccagtttggctggtgtggccaaaaagttcagattttgaaaataaattttagatgggtttatttttaaaactaaaaattcaaatggttgtgttctagcactctgaatatctgattaattagaggtttaggtttacatggcaggcatacactttgatcattgaatgcaccaacatatgtatgtgcttcttctcaggatttaatcccaaggaaaatgtggacattcatatgctgaatcagggacgagatagaacctgtgggatgggctggttccatgcacgacaaccacaaggatgaaggatcctactccctccatttcaaaataaattaatttttaaaatttaaattttatctcaaaataaattaattcctaccaatcatggttcatgaatcgagaaattttgtccctcaattatctctcacatactcactcatgaatattgcttttctattaatgaggggcattatagttttttatcctactaattttaggaccaagagagcaactagctgcactagcaacactcgatttataataataaattattttttatctttaacaaaaatataaccatacgaacatttttatgcttggataaataatattgcattattatgaagttttataaatatattacaatataaatgtcgcaaaaaatgcactttacaggctgtgtgttgatgtccaaaatacatatagtcccatgaatataacttcttagccgagaacctggagtaaccaacaaaaaccatgtagtgcaatattactaatgctagcagacataccattaatcagagatataaaacctaataaaatccttgcactccctgtggtatatgaaatattgcgaagcaacattctttctaatcatcataaaggcctggatcacataacactaatattaactgctcttataggacagaaccataatattaactgatctgcaacaaattaatgtccctcttaatttccttggatagtaccctctcaagctagctctcataacaaaccaattaatccaacaaaaaaaaaaggctctggaagctatcatgcaattctatatgtgctggtgatcatgtggaaatcaattaatatccatgaaattgaatctacatggtacactagtacaaagcccagctataaggtggtccattaattgcacatacttcatttcaagattaaaggtgctcaccaggaccatatatgcaatgattcaattgatgcatgactcatcttgttcagttatatacataggagtgtatatatcatgattcatcttgacagatggctagctagcagtttgttgtgtcaatggctataagaacacagtacaaacaccattcccttgatttctggatccttgccctagtctttaatgcagtacattttgtgtttttatcatgtgaaactgcagggtaatggatgggcaatgcagctgcttgcagtcacctgcctctcccttgccgccaagatggaggaaactctagtgccatccatcctagatttacaggcaatttaaaccaatcactcaatcacattgatgttttgatctcaattaaatcctctttggaacaaaggaaaatgaagaattctttttaggattttaatcctatagttattttttaaaaaaatggtcctttaaacaaaggactggatctatgatttttttaatggctcaatccatgaagatgttggagaaaagttagcatgggattcaacctcgtgaaaaatttatttgagtctatctctctcattcaattcttgtgcatttcttatggtctttccaaataaccattcatcatgtgttttctatttctctattttgcatatgcatttctaccaaaatcctttttcttctattcctgccgtttacgattcttgtgttccaaaggtggcctaagtgctcttaaccaaatatttgttccatttatggtatatttgcattgtttctgtcaatattaattcatcctagggtctgatagtacttcctttacgaaaatactttcttacaacatgcatacatgcacattgttgtacatttacagatggaggatgcaagatacatatttgagcatcggacaatttttcggatggagcttctagtccttgatgcgctagattggaggcttcgatcgataacacccttcactttcatgtacttgtttgctgacaaggtcgatccaaatggcaagcacatcagggaattgatccatcaagccactcaagtaacattagccacaattcatggtattccacgcaaaatagtatatgcaaaatagtactagattggttttttatgggacggaggaagtaccaaataagggctcgtttagaacacaagtattttcttcgaaagctaaatactttatatgaaatcctacaaaaatgttttaaaacccttagttcaaaatgagccctgatcatagtattgttttcaatgtgaattctacaaatctaattatccaaaattgtcacagacactgagttcttggatcactgcccatcatccatcgcagcagcagcagtgctatgcgcctccagtgagatcatgcaacttgtgtccattgatcatggaactctggttagctggcgcattattggccttgacgaggtagtacatgcttaccctgcagagggtttcagagtttcagtgattaatcatcgtgagattctcgcgtggtcatcactagatgggaatgtagtgtcctgataaccttcaaattaaccttttgcctctgtcttgtccgtgtaggaagcaatcatcaggtgctaccggctaatgcagcaattgatatctagtaacaatgttgggagagaatcgacagagataacaatggcgacgacgacgacgacggcgacaactgctgtgagctcagaggaggttgtgtcctcttctcccccatcaaagaggaggaagatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0421100, RefSeq:Os08g0421100