Os08g0421700

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0421700| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001068357.1 GI:115476451 GeneID:4345594| Length = 138...")
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Gene Name

Os08g0421700

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001068357.1 GI:115476451 GeneID:4345594

Length

1387 bp

Definition

Oryza sativa Japonica Group Os08g0421700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20272797..20274183

Sequence Coding Region

20273107..20273850

Expression

GEO Profiles:Os08g0421700

Genome Context

<gbrowseImage1> name=NC_008401:20272797..20274183 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20272797..20274183 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtcgtcgccgactccagcgccgctgctccccgtggccccgcttgacggcggcggcgggtacctccggtggaaggagtccgtgctgctccgcctccgcaccctcgacttggcctacgtgctgtccgagcaccagccagaggacgggaggagtgattctgccaagaagaagcgggcgcgcgacgacgagctctgccgcggccacatcctcgccacgctctccgaccgcctcctgccggactacgcgcaccacgccaccgccgcggccgcgtggcgcgccctggcgcgcacctacgacatggacggcaagttgcccaacttgccgctggaccgcttcttcgcatacaggttcgtggacggcgagcccgtcctggagcagctcgcgcacctggaggccatgggcgtcgccggcaagctcgatgaccgtacaatgtacggcctggtgcaccagaagctcccgccggctctggtgaaggccatcgctctcgcgtcgccgccgtacccggaccctccatccatggaccacatctgggacacggctcgacttgaagagaggatgcgtttgtgcggcgaaattcgccgtggcgagcacactcaggacaaggaagacgacgacgaccaaggaggaggagactacccagatgaagatcaccggagcccgaaacggaagaggcgatacgatcgcgggccgtgctacaactgcggcgagccggggcacatcgccagggattgcagaggatga</cdnaseq>

Protein Sequence

<aaseq>MMSSPTPAPLLPVAPLDGGGGYLRWKESVLLRLRTLDLAYVLSE HQPEDGRSDSAKKKRARDDELCRGHILATLSDRLLPDYAHHATAAAAWRALARTYDMD GKLPNLPLDRFFAYRFVDGEPVLEQLAHLEAMGVAGKLDDRTMYGLVHQKLPPALVKA IALASPPYPDPPSMDHIWDTARLEERMRLCGEIRRGEHTQDKEDDDDQGGGDYPDEDH RSPKRKRRYDRGPCYNCGEPGHIARDCRG</aaseq>

Gene Sequence

<dnaseqindica>311..1054#gattcgtgaaagagaagcctccttccaccaccgatccacataagtccaggaagccgcctcctcccaccggcgccgacgaggaaagccgccgatcgacgggaaggccgccgcagcgccgtcgatctgcgagacctgaggtatgtcaccgcgccgcaccaccgtagctgacgtcgaccaccttatctttgttcttttaatcacttgttcgcagttgggctgcacgccaactgtttgtgaaaatgatcacgaaagcaaaaggatccctcctgtcctgcctgcctgtccaggtgttgctgcgcgaccgcgggcgatgatgtcgtcgccgactccagcgccgctgctccccgtggccccgcttgacggcggcggcgggtacctccggtggaaggagtccgtgctgctccgcctccgcaccctcgacttggcctacgtgctgtccgagcaccagccagaggacgggaggagtgattctgccaagaagaagcgggcgcgcgacgacgagctctgccgcggccacatcctcgccacgctctccgaccgcctcctgccggactacgcgcaccacgccaccgccgcggccgcgtggcgcgccctggcgcgcacctacgacatggacggcaagttgcccaacttgccgctggaccgcttcttcgcatacaggttcgtggacggcgagcccgtcctggagcagctcgcgcacctggaggccatgggcgtcgccggcaagctcgatgaccgtacaatgtacggcctggtgcaccagaagctcccgccggctctggtgaaggccatcgctctcgcgtcgccgccgtacccggaccctccatccatggaccacatctgggacacggctcgacttgaagagaggatgcgtttgtgcggcgaaattcgccgtggcgagcacactcaggacaaggaagacgacgacgaccaaggaggaggagactacccagatgaagatcaccggagcccgaaacggaagaggcgatacgatcgcgggccgtgctacaactgcggcgagccggggcacatcgccagggattgcagaggatgagctgggtctcctgagctttgcattacctaacttcagcttattttggatgtagaaaccacaagggaatgctcaaggatgataggcatgttggtaacttagttgctagagcaaattaggcttattttggttgtctagttaggtttctctttgatggcttctttagacatagtacttatgggccatgggagctattttattctcgactcgtagttatgggccatggcctcatgcttttggcaaagacattgcaattgcatgttggtcacgctgttgcaaacttgtgttctgggaatcggggaagatgctgggtgcatggaagatatacttttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0421700, RefSeq:Os08g0421700