Os08g0426866

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0426866| Description = Homeodomain-like containing protein| Version = NM_001188660.1 GI:297726450 GeneID:9266350| Length = 4526 bp| Defini...")
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Gene Name

Os08g0426866

Description

Homeodomain-like containing protein

Version

NM_001188660.1 GI:297726450 GeneID:9266350

Length

4526 bp

Definition

Oryza sativa Japonica Group Os08g0426866, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20616706..20621231

Sequence Coding Region

20616706..20617570,20617651..20617727,20618498..20618543,20618729..20618960,20621201..20621231

Expression

GEO Profiles:Os08g0426866

Genome Context

<gbrowseImage1> name=NC_008401:20616706..20621231 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20616706..20621231 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggcgacgtcgacgacgcccgacctgtcgctgcacatcagcctgccgagcggtggcgcggcggtggggacgacggcgccgccggggctggggaacggcggtgcggttggtggtgccggcggcggcaaggcggcgggtggtggtgacccgtggcggaggctggatggctccacagcgtcgacggagctgtcgctgtcgacgccgcagcagcagcaggagggcagtacatcggcggccgatgtgctgccgtggcggctgcggcagccgacggcggcggcggcgtccgtgccggtgacactgccgacgataccgatggatggttcggcggcggcggcgcgcgcgccgatccgtggggtgcctgtgtatagcggcggcggcggcggtggccacccgttcctcggaggcggcggcggcgaccaccggcacaaccggctctacaacccctaccactccacggcatggccctcgtcgtcgctgtgctcgacgtcgccggcgccggctcctcctcccccaccagcagctctcgacccgacgacgtcgtcgctgctgtcgccgtccgcgtaccaccggatgctctccagcacggggcgcctccacggcgtgctcgccgacaccctccgcggctacgccggcgccgctgcggtggcgggctccatcggctacggctccgcggccgccgccgccgccgccatgggcggctacggcggcgccggcgccggcggcgggttcgcctcctcccgcttcatgccgcgcctcctcccggcgtcccgccgcagcatgcgcgccccgcggatgcggtggacgagctccctccacgcccgcttcgtccacgccgtcgagcttctcggcggccacgagcgagcgacgcccaaatcggtgctagagctgatggacgtcaaggatctgaccctagctcatgtgaagagccatctgcagatgtataggaccgtgaagagcactgacaagccagcagcagcctcagggccgatggacggcagcggctccggctccggctccggcgacgacgagctcctggccggcgatggaaggcaggcgacgtcatcgggcgccgatgcggaccggcggatgtcgttcaccgagcaccggtcctcctccgagggcgcggcgagccatgccggcggtggcggcgacggcgactgctcctcctctgccgtcaactccgacaccatcagagcgcgcagcaattcgccgagtgtacagtccagtcctaggctggaaatctag</cdnaseq>

Protein Sequence

<aaseq>MASATSTTPDLSLHISLPSGGAAVGTTAPPGLGNGGAVGGAGGG KAAGGGDPWRRLDGSTASTELSLSTPQQQQEGSTSAADVLPWRLRQPTAAAASVPVTL PTIPMDGSAAAARAPIRGVPVYSGGGGGGHPFLGGGGGDHRHNRLYNPYHSTAWPSSS LCSTSPAPAPPPPPAALDPTTSSLLSPSAYHRMLSSTGRLHGVLADTLRGYAGAAAVA GSIGYGSAAAAAAAMGGYGGAGAGGGFASSRFMPRLLPASRRSMRAPRMRWTSSLHAR FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDKPAAASGPMDG SGSGSGSGDDELLAGDGRQATSSGADADRRMSFTEHRSSSEGAASHAGGGGDGDCSSS AVNSDTIRARSNSPSVQSSPRLEI</aaseq>

Gene Sequence

<dnaseqindica>1..865#946..1022#1793..1838#2024..2255#4496..4526#atggcgtcggcgacgtcgacgacgcccgacctgtcgctgcacatcagcctgccgagcggtggcgcggcggtggggacgacggcgccgccggggctggggaacggcggtgcggttggtggtgccggcggcggcaaggcggcgggtggtggtgacccgtggcggaggctggatggctccacagcgtcgacggagctgtcgctgtcgacgccgcagcagcagcaggagggcagtacatcggcggccgatgtgctgccgtggcggctgcggcagccgacggcggcggcggcgtccgtgccggtgacactgccgacgataccgatggatggttcggcggcggcggcgcgcgcgccgatccgtggggtgcctgtgtatagcggcggcggcggcggtggccacccgttcctcggaggcggcggcggcgaccaccggcacaaccggctctacaacccctaccactccacggcatggccctcgtcgtcgctgtgctcgacgtcgccggcgccggctcctcctcccccaccagcagctctcgacccgacgacgtcgtcgctgctgtcgccgtccgcgtaccaccggatgctctccagcacggggcgcctccacggcgtgctcgccgacaccctccgcggctacgccggcgccgctgcggtggcgggctccatcggctacggctccgcggccgccgccgccgccgccatgggcggctacggcggcgccggcgccggcggcgggttcgcctcctcccgcttcatgccgcgcctcctcccggcgtcccgccgcagcatgcgcgccccgcggatgcggtggacgagctccctccacgcccgcttcgtccacgccgtcgagcttctcggcggccacgagcgtgaggccccatctaaacatggatcatttcatgcgaaaatcagctcaaaaaatctcatctcgcgctctaatttgatgcaggagcgacgcccaaatcggtgctagagctgatggacgtcaaggatctgaccctagctcatgtgaagagccatctgcaggtgatgatgatgatgatgagatcgatgccctacctatcaacaacaccaacaacttctcctcctccttggaaatttccatatcatatcaccacatcgccatggccatgatcgagctaagctactacaaagcttgggaaaattgcagctgatttcccttcaaaatccgcactgctcacgcgcactgtttcttcttgttcttgctcggacactgcaccgtacgtacatggggggagagagagagaaatcgagagagtaccaggcacagattccgatgagaactccatgagagagagaaatcgaggagccctagagagagagattgtgtgtgtgtggagaagatcgatgcgtgtgggggtgtgtgcgagaaaaagttgccatcattatgcaataatgcattctgtgtgtgtcctgaccagagcacttcactcactcactcagctagggaacagaatcccagccaagaagagagagagagtgaagctgagcagcaagtgcagtaaaatttttctcaattctttcttgaggtgttctcgtgatggagtagtatttggtttgtccatttcttggtgtttttttgctttgcttttggctgccatgatctccagcttgatccatcatgttttgctgtcttttactatcctcactctgaatactccgattgataatctatttatccatcccaagaagatgcatatatatctttctttgcagctttgctttgtgcattgctttctcggtgcatgattcttttcttgctgcgctttctgcagatgtataggaccgtgaagagcactgacaagccagcagcagcctcaggtaattaacctcgaccatttcagatcatcaatccccaattaaccaattccccattgccaaattaacttcactaaattcattgccttattaattaaatcatcacattgtgtacactattttttgtgtgcttactagcaaacagatatgggactgaacattattgcttgtgatattattgtcttcagggccgatggacggcagcggctccggctccggctccggcgacgacgagctcctggccggcgatggaaggcaggcgacgtcatcgggcgccgatgcggaccggcggatgtcgttcaccgagcaccggtcctcctccgagggcgcggcgagccatgccggcggtggcggcgacggcgactgctcctcctctgccgtcaactccgacaccatcagagcgcgcagcaattcgccgaggtatgcacacaaaatttggtgactaatttcgttgtttgtttgtttgtttgtttgtttttcagtgctttagttttgtgttatttttcctagtacatcaatagaaacttgggattgtgtttggtgctgttcgttaaaagaaaagtcttagtttggacagtaacatacatagcttaagagcaaagataacccaaacaggaagttaatcaagttgtgaacacaagctactacagtataatctggttattttggtagtggctaaagctcaaaaagatgtttggccctacacaaatcacacacaaaaagaaggagagagagagatatggataggagggcctctcccatgcatttgacttgatcagtgcatgcatgcacagccatggcctcctccttcaagatgaagatgtgtgtgtttttcttgggctttgcaatgtcctcttcttcctcctagttcttctctctccagtggtaatagatctgcttttttttaccttttcttatcaatgcatggctgcctgtgtgtgtgtgtccagggggctgtgggctttgacctcagacctgatactagctgacatcctagaaatgtgtaaccaagggcctcttcctgtgttgctttgtcctttactttccttgccattactcccagtgtctactgatactgtagcagatatactgaggttcaataataggagaaatttatgtattgggcatcaaacattgtttttttaaaaaaaaaacatgatatgaaatgctgtttatatattgacacagaaaaactctctccatcctgaaaactgacttttgtagcttgataaagctctttcaaatttgaaaattatgtaatattttggattgttcactaaaaatgtgttccatttccatgatcatctataatctacgatgcatttatcgcctaataaatttctcaagattttaattatctcttttaagtttgtcttaagatttctgtaatgttgaccatttttatactactgcatttttttttgaaaaaaaaatggagcacaaaagtaaaaaaaaaagaattgcataatttcatttttacatattttccaaactatatagcttgtgttagccattggtacgaaacatttgaatgtagggttttttttggaatgaatatttaaatgtaggttttgcctactataaacaataaattaaagggctcatatataatcccccccaacatgcacacgcaaaggaaaaaaagaattacatccattttgagtacaacaagaacaattacaattttcagtgtctcgacctttagagtttcgtttctcagaattttctcttctcggttttctatgcataaatcttgtagagaaaaatcatattggagtgcgcacattggtaaatataccaagggtagcatcattcactactagagaactgatctttgctgggtcagacgaaaaccacattagccccagttccaataacaaccgggactaaaggtcccgaattcttggtcccggactatagagggttacaatccgggacaaataagggtttctccaccagtgatttatggtgtgaaccaacttttgtatgtttttgttaaaatattacataaatagaatatattgtgggattttttaacagtttaattattaaaaacagtcttagttgaaaaataaataaaatatctaaaaatagcgatgggtttaaaagtgtatgaataatttattaatggaggagaccttcatatgcatcgtcaatgagagaaatatctagtccatgttagtaactaaatgccaattataaagtatgccatctatataactatcctagaaagaaataatacagtgtacaatagaatatttgtctagtatgaacttaacaaaagataattagtaccttttctgacataattgagctaataggtttttcaagctttttaatgtagagaagcttgttttagtgtgcatttgtgcccgcgccagttatatgcaacatggtttacatatctatgagtaacttctttctctctctgtgacagtactgtgcatgcacacatttgtaccaacacaacatataaatctttttaatggcatgttgcctagagctagagagctttgtagccagcaaacctatggctaggttcacaattttcatgattgccggtaatatgtactacaagttactactgttccaaattaaaagcattgcaaaggtagggattaattaattgggacaccaaattaaagtgctttggcctacagtgtacagtccagtcctaggctggaaatctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0426866, RefSeq:Os08g0426866