Os08g0428900
| Gene Name |
Os08g0428900 |
|---|---|
| Description |
Chaperonin Cpn60/TCP-1 family protein |
| Version |
NM_001068386.1 GI:115476509 GeneID:4345628 |
| Length |
7318 bp |
| Definition |
Oryza sativa Japonica Group Os08g0428900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:20754246..20761563 |
| Sequence Coding Region |
20754573..20754827,20754995..20755252,20755350..20756822,20756924..20757082,20757195..20757321 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:20754246..20761563 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:20754246..20761563 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggagtggtggagttctcggtgctgggggcggtgcagaagttcagatccctcatcgccggccccacgccccccgccgccgccgccgaaggcgaggaggtggcccggcagacgagcggcccgccgtcgcccgcgaccccgacgagatcgcgcagcggcgccgcggacacgacgccgccgctccccgcgaggcccgggggcggcaggcgcgccatcgccctgcgccgccagatctcctcgccgcagctgctccgctgccacgctgtcaggcgaggcgatggagaggacgacgatgagcccggggtacagtttttcaccccagggaatgactacttacatgacttttcagatacagactctcttagcgtcagtactcctaacggggtcgccaggtccttgacaccaagccctctggagagcccgacttggatggtggggcacaacgacgcctcgccaacgtccaagaggaacgagcgcctcagcctggattctcttggttgcgataccaggctgaacggtggcatcgcagacaggagtggaggtgacatgacccgttatcctgctgatttcgatgccaatgtctggctcccgccatcaccggaagatgagggtgacgatgttgaagcgagattatttggattcgactacgaggatgatgaggctggggactcgggcaagcttcttgctcttggtaactttaatactaacaaaatagttggtgttgacacaatcacagacatagctcacaaagagggtctgaggaatgctgtacttgggcatttccgggctcttgtggctcaattgcttaagggagaatgtattgatctggaaaatgacaatggatccaaaagctggcttgaaatagtatcctccctagcttggctagctgctggctatgtgagaccagataccaagaaaggtggcagcatggatcctactgattatgtgaaagttaaatgtttagcatcaggggatccaagtgatagcaatcttgttagaggagtggtttgctctaagaatgtaaaacacaaacgcatggcctctgagcatgtgaatgcaaaattgctcattttagggggagcacttgagtatcagaaggtcacgaacaaactagcatccattgatactatacttgaacaggaaaaggagcacctgagggcaattgttgcaaagattgagtctcggcgaccaaatgtgctgctagttgagaaaagtgtctcatcttatgcccaggaactcttggcaaaagatatttctttagttctgaatgttaagagaccgcttttggataggatatcaagatgctcaggagcacaaattgcctcgtcaattgacaatattgcttcagcaagactaggtcaatgtgaattgttcaaggtgcataaagtttcagaattctcatcaggaaaacagacaaacaggaggtcaatgaagaccctgatgttctttgaaggctgtccgaggcgtttaggttgcacggttctactgagaggatcatgtcgagaggaactaaagaaaattaagcgtgttgtgcaacttgctgtgtttgcagcttatcacctctctcttgaaacatcattctttgctgatgaaggtgcgactcttcccaaggttccttcaaggccaatggtagtggtaaatgatattcgaagtgacccaagtaactattttgctggatctgctggtgttggtattcctcatggacttaaacctgtacaaggcaaacattcagaagctactagagtcaatggtatgtttaaggaaaattctatatcacctggctcattatcgttgaatgaggaaggagagggggtcatctctgagcatagggaatctaaaattcctgttgaacatatgaattgtcatgatcatgattcattccatgcaactgaatcatgcaaaggtcataaaatatttccatgttcattggatcatgacattagaacttcagatatggtgatgcaatatcagtatttgaatgactcgacacaacttcccataaatgatgaccgtcaaggcatggtttcaggaaagaaatttcaagaggtagaccactatggtcccaaaccacatgatgattatttgatgggagatgcagatggcccgaatgagctttctggtgaatattttcctgctactgacaaccatcagagcatcttagtttccctttcaagcacttgtatccccaaaagcatgctatgcgagcgttctcagctcttccgcatcaagttttatggtagctttgataagccacttgggaggtacctcagggaagacttatttgatcaggcatattgctgcccgtcatgcaaagagtcatcagaatcacatgtcaggtgctatactcatcagcatgggagtttaacaattagtgttcggcggcttctgtctcaaaagttaccaggtgaacgtgatggtaggatatggatgtggcatagatgcctcaagtgcgaacctaaggatggtgtaccacctgccacacggagggtaattatgtcagatgcagcttggggtctgtcgtttgggaagttcttggagctaagcttttcaaaccatactactgctaaccgagttgcaagttgtggacattctctccagagagactgccttcgtttctatgggtacggaaacatggttgctttcttcagatattctcctgttgatattctctcagttaacctacccccctcagtactggatttcaattgccgcagtcgacaagattggatgagaaggatggcagttgagatatatagcaaaatggagaccttacattcagaggtatatgattttcttcatcataatgaaaatagtgttacatcagaggatgagccggtgaaagcaggtgttcaaaggcagatcatagagatgaaagatttgcttaaaatggaaagaaatggatatgagatcctgctgttgccagttattacagatagcaatcattctgtgcaggtctctattgatgttcttgagctcaaccgcttgagacgcggtcttctccttgatgcttacatttgggatcgaaggctttgttacatagattcactccttaaaaaagacagtcatgtttcaaatcctgatattttcttagatgtcagactgaaagagtggaaagctgacctgcttgtgggggatacaaaaataggaaaatccacaaatttgtcgcaatcttcaggaagtccaagaaaatccttgctatctagagaaggctgcttgaatgatacggaatacaggatgggtgagacaaattcacagattgatcttgtaactcatcctgtggatgatgcagaagatctggacaaggttttccgcagattcaatggagagacagagcagccagttactacagctacaatgggtaaggaacctgttgaaaggttaccctcacttgcatctattttttcagataagattgatttggcatggactggatctagtgagatacaagatgaccttctacaaggttttaccaaaattgatgagtatggatcgtttaatttcccagacaatccaagctatgggaattctgtaacccctgtcagaattcattcatttgattctaaatttgctatacaccagcgagaacgcaatggattggctcctacttcattgcatctgtcgtcattcagatctgctgaatactttggggattttactagtatcctgaaagatccaatgccaaacatacggagggcttgttctcaaaggtctcctggtgcagtagagaaattaaatgttgttcttacccgtacacttacatatatctcatctgcttcacatatgatcgatgatggggcacggctgctgttgcctcagattgggtatgaagatgatgctgtcattgcagtctatgatgatgagcctaccagtatcgtgtcctatgcaatgacttcacaagaatatgtgcagcaagtcacacgcaaactgaattcaagtttgagtttcttacacctaccaaatgccattgacagcagccatggacttgacgggaccttgctctcacaagaagaccatttggattctaagggaactcactttaagttttcttttgatgatgaatcgccactttctgaagataaagcaaagttttccattacttgttatttcgcaaagcattttgccgcacttaggaagaaatgctgcccaaaggatattgatttcatccgttcacttagccgctgcaagagatggaatgcgcaaggtggaaaaagcaatgtttactttgcaaagactcttgatgagagattcataatcaaacaagtcaccaggacagagcttgaatcgtttgtagagtttgctcctcagtacttcagatatttgatggaatccctgacttcaggtagtccaacttgcctggccaaaatcgtaggagtatatcaggttaatatcaagggcttaaaaggtggtagggaagtaaagatggacctcatggtgatggagaatcttttctttgaaaggaagatatctagagtctatgatctaaagggttcattgcgctcacgctatacatccagtgagagtaaagtcctcttggattcaaacctcctagaggcattgcatacaaagccaatatttttagggagcaaggcaaaacgaagattggaaagagccgtttggaatgacacttcttttcttgcgacagcggatgtcatggattactcactacttgttggaatcgacgaggagaagaaagagcttgtcattggcattattgactacttgcgccagtacacctgggacaagcagctcgagacctgggtgaaagcttcaggcatcctgggaggccccaagaacgagtccccgaccgtcatatctccgatgcagtacaagaagaggttcaggaaagccatgtcaaagtacttcctcaccgtccccgatcagtggtcctcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGVVEFSVLGAVQKFRSLIAGPTPPAAAAEGEEVARQTSGPPSP ATPTRSRSGAADTTPPLPARPGGGRRAIALRRQISSPQLLRCHAVRRGDGEDDDEPGV QFFTPGNDYLHDFSDTDSLSVSTPNGVARSLTPSPLESPTWMVGHNDASPTSKRNERL SLDSLGCDTRLNGGIADRSGGDMTRYPADFDANVWLPPSPEDEGDDVEARLFGFDYED DEAGDSGKLLALGNFNTNKIVGVDTITDIAHKEGLRNAVLGHFRALVAQLLKGECIDL ENDNGSKSWLEIVSSLAWLAAGYVRPDTKKGGSMDPTDYVKVKCLASGDPSDSNLVRG VVCSKNVKHKRMASEHVNAKLLILGGALEYQKVTNKLASIDTILEQEKEHLRAIVAKI ESRRPNVLLVEKSVSSYAQELLAKDISLVLNVKRPLLDRISRCSGAQIASSIDNIASA RLGQCELFKVHKVSEFSSGKQTNRRSMKTLMFFEGCPRRLGCTVLLRGSCREELKKIK RVVQLAVFAAYHLSLETSFFADEGATLPKVPSRPMVVVNDIRSDPSNYFAGSAGVGIP HGLKPVQGKHSEATRVNGMFKENSISPGSLSLNEEGEGVISEHRESKIPVEHMNCHDH DSFHATESCKGHKIFPCSLDHDIRTSDMVMQYQYLNDSTQLPINDDRQGMVSGKKFQE VDHYGPKPHDDYLMGDADGPNELSGEYFPATDNHQSILVSLSSTCIPKSMLCERSQLF RIKFYGSFDKPLGRYLREDLFDQAYCCPSCKESSESHVRCYTHQHGSLTISVRRLLSQ KLPGERDGRIWMWHRCLKCEPKDGVPPATRRVIMSDAAWGLSFGKFLELSFSNHTTAN RVASCGHSLQRDCLRFYGYGNMVAFFRYSPVDILSVNLPPSVLDFNCRSRQDWMRRMA VEIYSKMETLHSEVYDFLHHNENSVTSEDEPVKAGVQRQIIEMKDLLKMERNGYEILL LPVITDSNHSVQVSIDVLELNRLRRGLLLDAYIWDRRLCYIDSLLKKDSHVSNPDIFL DVRLKEWKADLLVGDTKIGKSTNLSQSSGSPRKSLLSREGCLNDTEYRMGETNSQIDL VTHPVDDAEDLDKVFRRFNGETEQPVTTATMGKEPVERLPSLASIFSDKIDLAWTGSS EIQDDLLQGFTKIDEYGSFNFPDNPSYGNSVTPVRIHSFDSKFAIHQRERNGLAPTSL HLSSFRSAEYFGDFTSILKDPMPNIRRACSQRSPGAVEKLNVVLTRTLTYISSASHMI DDGARLLLPQIGYEDDAVIAVYDDEPTSIVSYAMTSQEYVQQVTRKLNSSLSFLHLPN AIDSSHGLDGTLLSQEDHLDSKGTHFKFSFDDESPLSEDKAKFSITCYFAKHFAALRK KCCPKDIDFIRSLSRCKRWNAQGGKSNVYFAKTLDERFIIKQVTRTELESFVEFAPQY FRYLMESLTSGSPTCLAKIVGVYQVNIKGLKGGREVKMDLMVMENLFFERKISRVYDL KGSLRSRYTSSESKVLLDSNLLEALHTKPIFLGSKAKRRLERAVWNDTSFLATADVMD YSLLVGIDEEKKELVIGIIDYLRQYTWDKQLETWVKASGILGGPKNESPTVISPMQYK KRFRKAMSKYFLTVPDQWSS</aaseq> |
| Gene Sequence |
<dnaseqindica>6737..6991#6312..6569#4742..6214#4482..4640#4243..4369#3831..4162#2934..3743#2207..2545#1977..2130#1174..1890#350..618#atttccttccgccatcgctttgcgtttgcacccccacctccctctctctctccggcgatgctctccgacggcaccccccgccgcaccatcgccgccgcctcctcgtccgcctccgcgcgcgcgtaacccggcaccaccgcagcgacgggcaacctgacctatgccccccgaccagtccggcattggctgaccccctaatgcctcgccactgactaaccaaaccgaaccctgtacatatacccgccgccgccttcgtcgtcgtcgccggtgagggattttagcctcggcggacgcgagccaaggcgtggttcttctagagtttttttttatatatattttggtggtggtgatgggagtggtggagttctcggtgctgggggcggtgcagaagttcagatccctcatcgccggccccacgccccccgccgccgccgccgaaggcgaggaggtggcccggcagacgagcggcccgccgtcgcccgcgaccccgacgagatcgcgcagcggcgccgcggacacgacgccgccgctccccgcgaggcccgggggcggcaggcgcgccatcgccctgcgccgccagatctcctcgccgcagctgctccgctgccacgctgtcaggtactccctccatttccatcgccttctcatgccctccttacgctaccacgacttccttttttttcttcttcttcttccttggcttgctatggaggaaaaggggaaaagcgaggtagagattgcttggtattacgatattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattaagtaatcacttacatggcatctaaccttttcgatggtgttggtgaatggtgataccacctattattgactaatttaggtgtagtggattatgcaacatatgcaggtagcactcatggatgttcatgtatgcttgttggtgttaatccggcgctgctttgtaatcgattcgcaaatactattgtgctgaatttgttgtggtacttgttttcgtggatgcaggcgaggcgatggagaggacgacgatgagcccggggtacagtttttcaccccagggaatgactacttacatgacttttcagatacagactctcttagcgtcagtactcctaacggggtcgccaggtccttgacaccaagccctctggagagcccgacttggatggtggggcacaacgacgcctcgccaacgtccaagaggaacgagcgcctcagcctggattctcttggttgcgataccaggctgaacggtggcatcgcagacaggagtggaggtgacatgacccgttatcctgctgatttcgatgccaatgtctggctcccgccatcaccggaagatgagggtgacgatgttgaagcgagattatttggattcgactacgaggatgatgaggctggggactcgggcaagcttcttgctcttggtaactttaatactaacaaaatagttggtgttgacacaatcacagacatagctcacaaagagggtctgaggaatgctgtacttgggcatttccgggctcttgtggctcaattgcttaagggagaatgtattgatctggaaaatgacaatggatccaaaagctggcttgaaatagtatcctccctagcttggctagctgctggctatgtgagaccagataccaagaaaggtggcagcatggatcctactgattatgtgaaagttaaatgtttagcatcaggggatccaagtgataggtatgttcttagctttgttgtttgactggtttttacatgtttgtactttccatcatatgaaactgatgggtgttccttttatgcagcaatcttgttagaggagtggtttgctctaagaatgtaaaacacaaacgcatggcctctgagcatgtgaatgcaaaattgctcattttagggggagcacttgagtatcagaaggtcacgaacaaactagcatccattgatactatacttgaacaggtttgtgttttcttcatggttgtgttgcatatatttgttgtttcttgttttgctgaatgaaataccattgatgcaggaaaaggagcacctgagggcaattgttgcaaagattgagtctcggcgaccaaatgtgctgctagttgagaaaagtgtctcatcttatgcccaggaactcttggcaaaagatatttctttagttctgaatgttaagagaccgcttttggataggatatcaagatgctcaggagcacaaattgcctcgtcaattgacaatattgcttcagcaagactaggtcaatgtgaattgttcaaggtgcataaagtttcagaattctcatcaggaaaacagacaaacaggaggtcaatgaagaccctgatgttctttgaaggctgtccgaggcgtttaggttgcacggtaataatctatttctgttccctaaatattccatttagattcatttcactaacataaattgataactccttgcttgtatattcaatcatacgcagtagtagcactggttctgtaattagttttcaattgaatatctcattttaccttttacactagttaaatgcccgttttttgccacgaataaaaatgaatcattcctgttcaaaagaaatgatttttccattgaatacactgaaacataatcacaattctgttacaacgggaactaagaatcaattgtaaaatcagcttgtacacattgtagggggagggtgtcagattcaccatcaccattgcattcttttcaaaggactatatatttctaatcaatgtacctcaacttctgcaggttctactgagaggatcatgtcgagaggaactaaagaaaattaagcgtgttgtgcaacttgctgtgtttgcagcttatcacctctctcttgaaacatcattctttgctgatgaaggtgcgactcttcccaaggttccttcaaggccaatggtagtggtaaatgatattcgaagtgacccaagtaactattttgctggatctgctggtgttggtattcctcatggacttaaacctgtacaaggcaaacattcagaagctactagagtcaatggtatgtttaaggaaaattctatatcacctggctcattatcgttgaatgaggaaggagagggggtcatctctgagcatagggaatctaaaattcctgttgaacatatgaattgtcatgatcatgattcattccatgcaactgaatcatgcaaaggtcataaaatatttccatgttcattggatcatgacattagaacttcagatatggtgatgcaatatcagtatttgaatgactcgacacaacttcccataaatgatgaccgtcaaggcatggtttcaggaaagaaatttcaagaggtagaccactatggtcccaaaccacatgatgattatttgatgggagatgcagatggcccgaatgagctttctggtgaatattttcctgctactgacaaccatcagagcatcttagtttccctttcaagcacttgtatccccaaaagcatgctatgcgagcgttctcagctcttccgcatcaagttttatggtagctttgataagccacttgggaggtacctcagggaagacttatttgatcaggtatttcctgtacaatccgtatgtgcactatcatatggccttcttatcattatcataatttttggaaatgttttttttcatgcaaaggcatattgctgcccgtcatgcaaagagtcatcagaatcacatgtcaggtgctatactcatcagcatgggagtttaacaattagtgttcggcggcttctgtctcaaaagttaccaggtgaacgtgatggtaggatatggatgtggcatagatgcctcaagtgcgaacctaaggatggtgtaccacctgccacacggagggtaattatgtcagatgcagcttggggtctgtcgtttgggaagttcttggagctaagcttttcaaaccatactactgctaaccgagttgcaagttgtggacattctctccagagagactgccttcgtttctatgggtatgtatctgctgtatccttcaccaattaacattgctcaatccttcaatgtgatttcaatttatctgctaaatatccaggtacggaaacatggttgctttcttcagatattctcctgttgatattctctcagttaacctacccccctcagtactggatttcaattgccgcagtcgacaagattggatgagaaggatggcagttgaggtatgcaatttttctaagttatgatgaccatgttcatagactgcatcatatagttttgctgtgaacttactaataatatgatactcatatacttgacttttggcttttgcagatatatagcaaaatggagaccttacattcagaggtatatgattttcttcatcataatgaaaatagtgttacatcagaggatgagccggtgaaagcaggtgttcaaaggcagatcatagagatgaaagatttgcttaaaatggaaagaaatggatatgaggtagtgcaacgagattttcctggttgtatgcgttcaggttaaacaaaaggttatgttatcttaatattgaccccctgtctctttctttgtttgttttgcagatcctgctgttgccagttattacagatagcaatcattctgtgcaggtctctattgatgttcttgagctcaaccgcttgagacgcggtcttctccttgatgcttacatttgggatcgaaggctttgttacatagattcactccttaaaaaagacagtcatgtttcaaatcctgatattttcttagatgtcagactgaaagagtggaaagctgacctgcttgtgggggatacaaaaataggaaaatccacaaatttgtcgcaatcttcaggaagtccaagaaaatccttgctatctagagaaggctgcttgaatgatacggaatacaggatgggtgagacaaattcacagattgatcttgtaactcatcctgtggatgatgcagaagatctggacaaggttttccgcagattcaatggagagacagagcagccagttactacagctacaatgggtaaggaacctgttgaaaggttaccctcacttgcatctattttttcagataagattgatttggcatggactggatctagtgagatacaagatgaccttctacaaggttttaccaaaattgatgagtatggatcgtttaatttcccagacaatccaagctatgggaattctgtaacccctgtcagaattcattcatttgattctaaatttgctatacaccagcgagaacgcaatggattggctcctacttcattgcatctgtcgtcattcagatctgctgaatactttggggattttactagtatcctgaaagatccaatgccaaacatacggagggcttgttctcaaaggtctcctggtgcagtagagaaattaaatgttgttcttacccgtacacttacatatatctcatctgcttcacatatgatcgatgatggggcacggctgctgttgcctcagattgggtatgaagatgatgctgtcattgcagtctatgatgatgagcctaccagtatcgtgtcctatgcaatgacttcacaagaatatgtgcagcaagtcacacgcaaactgaattcaagtttgagtttcttacacctaccaaatgccattgacagcagccatggacttgacgggaccttgctctcacaagaagaccatttggattctaagggaactcactttaagttttcttttgatgatgaatcgccactttctgaagataaagcaaagttttccattacttgttatttcgcaaagcattttgccgcacttaggaagaaatgctgcccaaaggatattgatttcatccgttcacttagccgctgcaagagatggaatgcgcaaggtggaaaaagcaatgtttactttgcaaagactcttgatgagagattcataatcaaacaagtcaccaggacagagcttgaatcgtttgtagagtttgctcctcagtacttcagatatttgatggaatccctgacttcaggtagtccaacttgcctggccaaaatcgtaggagtatatcaggtttgttttcttcttgttgcatgatttatctgatgatgaatgaagtgtatagagtattcccctggttctaacttctgctgccttttcttgagttcaggttaatatcaagggcttaaaaggtggtagggaagtaaagatggacctcatggtgatggagaatcttttctttgaaaggaagatatctagagtctatgatctaaagggttcattgcgctcacgctatacatccagtgagagtaaagtcctcttggattcaaacctcctagaggcattgcatacaaagccaatatttttagggagcaaggcaaaacgaagattggaaagagccgtttggaatgacacttcttttcttgcggtatgttgttatggaaattaatcttgataattcatctcatatatatattcttatttcagacaagggattgcacaaaatacttatttcttgtaaaactgcacaacttcatgaattggtgcattttatattactgaaaatgactgttaatcatttgaaatactttgcagacagcggatgtcatggattactcactacttgttggaatcgacgaggagaagaaagagcttgtcattggcattattgactacttgcgccagtacacctgggacaagcagctcgagacctgggtgaaagcttcaggcatcctgggaggccccaagaacgagtccccgaccgtcatatctccgatgcagtacaagaagaggttcaggaaagccatgtcaaagtacttcctcaccgtccccgatcagtggtcctcttgacaggcagcagctaaccttgttgatttttttcaatgtaaccaccagcgatcagaattcagaagcatcgccaccacaatagttttcaagtaaagattcataacccattttttctctgtccctatcacgaggttagtcgtcgattcattttgtacccaacttgtatcaggttgtagtcagtcaatagtagataggaaggataacctctcccccatggacaccaagcatggttatttgcagtgtccagccacagacaaggagaggcctgatccatgtacattatgacccacatagttaacatgaaaaatctgtcagaaagattgattcttt</dnaseqindica> 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| External Link(s) |
