Os08g0431300

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Revision as of 13:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0431300| Description = Similar to Dihydrolipoamide S-acetyltransferase| Version = NM_001068397.1 GI:115476531 GeneID:4345640| Length = 3427...")
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Gene Name

Os08g0431300

Description

Similar to Dihydrolipoamide S-acetyltransferase

Version

NM_001068397.1 GI:115476531 GeneID:4345640

Length

3427 bp

Definition

Oryza sativa Japonica Group Os08g0431300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20946837..20950263

Sequence Coding Region

20947075..20947179,20948478..20948561,20948658..20948728,20948815..20948902,20948992..20949183
,20949291..20950178

Expression

GEO Profiles:Os08g0431300

Genome Context

<gbrowseImage1> name=NC_008401:20946837..20950263 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20946837..20950263 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgactccagcgcccgtctcgctctcggccgcggcctccaccgtgccggcgcgcctcctcgtggggcggggcgccgcggcggcgccggtggcgaggcggcgggcgaggatggtggtggtgcgggccaagatccgggagatcttcatgccggcgctgagctccaccatgacggaagggaagatcgtgtcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgagtccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctcgtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccgaggacgacctccaggccgccctcgccaaggcccaggagctctccaaggcccacccgcagcaggcgcctccaccctccgatgccgccgcgccgccaccgccgcctcctccacccgcggccgctccggcggctccggcgccggtggcagccggcacgaagggcattgccaccccgcaagctaagaagctggccaagcagcatagggtggacctagctaaggtggctggcactgggccgttcgggcgaattacgccggccgatgttgaggctgccgccggcatcgagccgaagccgaaggttgtgcctgctgcttctgctgctcccgtgccgctgtctgctccggcaattggcgccgtgccacaggccgcggagcttcctccggtgcccggtgccacggtggttccattcactggcatgcaggctgcagtgagcaagaacatggtggagagcctcgcggtgcccgcattccgtgtgggatacccaattgtgaccgataagctcgatgagctatatgagaaggtcaagtcaaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagcacccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatcaacatcgcggtggctgtcgcaatcgatggtgggctcattacacctgttctggaggatgctgataagttggatatatatttgctctcacaaaaatggaaggaactagtcaagaaagctcgtgcaaaacagctccaaccaaatgagtacagctctgggacatttacactgtcaaacttgggtatgtttggtgttgatagatttgatgcaattcttccacctggccagggaggcataatggctgtcggagcctcaaaacctacagtggtggctgataaagatggtttctttagtgtcaagagcaaaatgctggttaatgtcactgctgatcacagaattgtatacggtgctgatctggcagcattcctgcaaacttttgcaaagattattgaggatcctgagagcttaactttgtaa</cdnaseq>

Protein Sequence

<aaseq>MATTPAPVSLSAAASTVPARLLVGRGAAAAPVARRRARMVVVRA KIREIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAA VLVPAGESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQAPPPSDAAAPPPPPPP PAAAPAAPAPVAAGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIE PKPKVVPAASAAPVPLSAPAIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAV PAFRVGYPIVTDKLDELYEKVKSKGVTMTVLLAKAAAMALAQHPVVNASCRDGKSFTY NTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTF TLSNLGMFGVDRFDAILPPGQGGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRI VYGADLAAFLQTFAKIIEDPESLTL</aaseq>

Gene Sequence

<dnaseqindica>3085..3189#1703..1786#1536..1606#1362..1449#1081..1272#86..973#tcgccgaccttctccttatacacccgacctcccccacctcgcctccgccgcctccacctcctcctcctccacctccacctctccaatggcgacgactccagcgcccgtctcgctctcggccgcggcctccaccgtgccggcgcgcctcctcgtggggcggggcgccgcggcggcgccggtggcgaggcggcgggcgaggatggtggtggtgcgggccaagatccgggagatcttcatgccggcgctgagctccaccatgacggaagggaagatcgtgtcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgagtccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctcgtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccgaggacgacctccaggccgccctcgccaaggcccaggagctctccaaggcccacccgcagcaggcgcctccaccctccgatgccgccgcgccgccaccgccgcctcctccacccgcggccgctccggcggctccggcgccggtggcagccggcacgaagggcattgccaccccgcaagctaagaagctggccaagcagcatagggtggacctagctaaggtggctggcactgggccgttcgggcgaattacgccggccgatgttgaggctgccgccggcatcgagccgaagccgaaggttgtgcctgctgcttctgctgctcccgtgccgctgtctgctccggcaattggcgccgtgccacaggccgcggagcttcctccggtgcccggtgccacggtggttccattcactggcatgcaggctgcagtgagcaagaacatggtggagagcctcgcggtgcccgcattccgtgtgggatacccaattgtgaccgataagctcgatgagctatatgagaaggtgctatacctttggagactttgggggtggcagtgcttaacctcctgtgatggtttattacattttggtcattttgttgattgttggggttgatttggtttggttaggtcaagtcaaagggggtgaccatgacagttctgctggcgaaggccgcagctatggcacttgcgcagcacccggtggtgaatgctagctgcagggatgggaagagcttcacttacaacaccaacatcaacatcgcggtggctgtcgcaatcgatggtgggctcattacacctgttctggaggatgctgataaggtacaggatatctgtgtgtttaatgtcgtttcatttaggaattgaatcatatgagttcactgaatagcttgagcaatggcatgatgcagttggatatatatttgctctcacaaaaatggaaggaactagtcaagaaagctcgtgcaaaacagctccaaccaaatgagtacagctctggtatggaacctgatgtttcagtcttgtagatcgttgttgaaaaacatgtgaaaattgtacttacctgaagaattggtggtctgcagggacatttacactgtcaaacttgggtatgtttggtgttgatagatttgatgcaattcttccacctggccaggtgaggttctctttctcctaatctgcttgatgctaaatattgatgtggttcctttactggtatatggcctaagtatttgagtgtgtatgaatacagggaggcataatggctgtcggagcctcaaaacctacagtggtggctgataaagatggtttctttagtgtcaagagcaaaatgctggttagttgcccttcacacatgcaatttttcagccaatactggaaattagtgattgttatattagtatgttgggaagtgcttctgtgctcctcaataaaaaaagctgcacacaaattaaagcgcatcaatggtctggattaaaaagtgattaacagggtaaacctcattagcgaggggcaatttcgtccaggaagtaaaattccatatccatacccagccgcctctatcaaggacgaaaaacattgaatcaaaaaacaggagaacagttgggatttctatcaaggtttcgccagtacaaagaacaggagaacactgaatcaaaagaagcttttatttggccgggagtttgcgtaatcatgatcatgaacggcggccgtagtggatgcgcgtggcatgaaccggccatgctccatctggtctgccgcccctgcagcctccccactgcggcgttgcccttcgatcgagaactggtcctctctcgtcgtcctatatataatccgtctcaacgccgacggcgggcaccaaacaacgccccgcacagctcgtcgccctcccattcctcgcacatgcccggccgatcttcaccacccagccctgttgccgtgtcaacctcccagatcgatggtgcgattggcctggtctgatgtgggattttacttcctggacgaaattggccctcgttaatgacggtttaccctagtaatcatcttttaatccgaaccattgatgtgctttaattttcgtgcagtatttttttccgaggagcatagaagcacgtctctagtatgttttgtgtctgtttgcttagtcatataagatcattcacaaattcacacattgaaccgaaatatttgtctaccaagtggatgaaccatctctcttaagctactaatttagcatgagttttggttttaatgctgagttctcattatcatttactcccagaccccatgtattactgatagccagtggcaaaggcaggagctctgcttagtgataaacgaattaccccatgtgtataatttggggtggttgggtgtggtaggtggttgacatcatgattttcatatatgatatgatcattcctttatatgtatacatgatccatccagtctttttatttacccacctgatattaagagcattgttctcataaaaaatatcaattcattggtaggaagtagggttgaagcaccacagatatatcttacgtcttgaactgttaatgcttatctgcgatttatttgaatgacatttctgtatatagaaacaactaaggtggatctacatttttttaggttaatgtcactgctgatcacagaattgtatacggtgctgatctggcagcattcctgcaaacttttgcaaagattattgaggatcctgagagcttaactttgtaagatttccttggaagtttcaactatcttcgctaatcattagtttgattcctatggaggtctattgtcgaataccatttttgtatctttaatcactcatcgggtattacttttcggttgtttgtactatttttccttctgaatgttgggtactgttggagagatgatactattaagttatggaaagcaataagctataactgtagaatagtttggtaattataatttttcgtaattcggt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0431300, RefSeq:Os08g0431300