Os08g0432800

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0432800| Description = Similar to BHLH transcription activator Ivory seed| Version = NM_001068405.1 GI:115476547 GeneID:4345648| Length = 2...")
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Gene Name

Os08g0432800

Description

Similar to BHLH transcription activator Ivory seed

Version

NM_001068405.1 GI:115476547 GeneID:4345648

Length

2978 bp

Definition

Oryza sativa Japonica Group Os08g0432800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21062283..21065260

Sequence Coding Region

21062499..21063080,21064590..21065045

Expression

GEO Profiles:Os08g0432800

Genome Context

<gbrowseImage1> name=NC_008401:21062283..21065260 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21062283..21065260 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggaagctgtaggcggcggcgacggcacggctctcctgccgtggcccggctcggccgcggccgcgccgctctacatgcccccggcagcagcggcagcggcgcccttcgccgccggcgagcagctgccggtggagcagcccttctacttcgacggaggcggaggcgtggcggggcataatcaccatcctcatcatcatcagtacgggatggaggcgccgccgccgatgacgatgatgcagatgggcggcgggggttcgtcgtcgtcgaggatggtggtgtccgggctgctcgggacgctgcaggcggagctcgggaggatgacggcgaaggagatcatggacgccaaggcgctggcggcgtcgcgcagccacagcgaggccgagcgccgccgccgccagcgcatcaacggccacctcgccaggctccgcagcctcctccccaacaccaccaagacggacaaggcgtcgctgctggcggaggtgatcgagcacgtcaaggagctgaagcggcagacgtcggcgatgatggaggacggcgccgcgggaggggaggcggcggcggcgccggtggtgctgctgccgacggaggacgacgagctggaggtggacgcggcggcggacgagggagggaggctcgtggcgagggcctcgctgtgctgcgaggaccgcgccgacctcatcccgggcatcgcccgcgcgctcgccgcgctccggctgcgcgcccgccgcgccgagatcgccacgctcggcggccgcgtccgcagcgtcctcctcatcgccgccgtcgaggaggaagatccagacgaggccgggaacgacgacgacggcgaacacggctacggcgttgccgcctcgcaccggaggcacgagctcgtcgcgtcgatccacgaggcgctgcgcggcgtcatgaaccgcaaagcggcgagcagcgacacctcctcttccggcgccggcggcggcggtgggagcatcaagaggcagcggatgatcagtgcacatgatcagcaaggttccttcaattctagtggctggtaa</cdnaseq>

Protein Sequence

<aaseq>MWEAVGGGDGTALLPWPGSAAAAPLYMPPAAAAAAPFAAGEQLP VEQPFYFDGGGGVAGHNHHPHHHQYGMEAPPPMTMMQMGGGGSSSSRMVVSGLLGTLQ AELGRMTAKEIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLA EVIEHVKELKRQTSAMMEDGAAGGEAAAAPVVLLPTEDDELEVDAAADEGGRLVARAS LCCEDRADLIPGIARALAALRLRARRAEIATLGGRVRSVLLIAAVEEEDPDEAGNDDD GEHGYGVAASHRRHELVASIHEALRGVMNRKAASSDTSSSGAGGGGGSIKRQRMISAH DQQGSFNSSGW</aaseq>

Gene Sequence

<dnaseqindica>2181..2762#216..671#gaaaagctagaacagctgctgctgcgagttgtagtagtagtagaagaagaaaaagcaagaaaaggttgttgcatagatcgatccatcgatgcgcacgatcgagtttattaattagctcaacgaaagaagaagcatcagcaagaagagccaagaactcgatcgatccaagaaggtaattgatcagctgattggttggtttggttgttgtggtggagatgtgggaagctgtaggcggcggcgacggcacggctctcctgccgtggcccggctcggccgcggccgcgccgctctacatgcccccggcagcagcggcagcggcgcccttcgccgccggcgagcagctgccggtggagcagcccttctacttcgacggaggcggaggcgtggcggggcataatcaccatcctcatcatcatcagtacgggatggaggcgccgccgccgatgacgatgatgcagatgggcggcgggggttcgtcgtcgtcgaggatggtggtgtccgggctgctcgggacgctgcaggcggagctcgggaggatgacggcgaaggagatcatggacgccaaggcgctggcggcgtcgcgcagccacagcgaggccgagcgccgccgccgccagcgcatcaacggccacctcgccaggctccgcagcctcctccccaacaccaccaaggtcaggcgatctcctccatgaatacatgattatttctcacatattactacatgtgcagcttctcacaatctcacagtgcactaatcgaattaattaattaactaaccaaaccttccttcttcccctatggatgatgatcatcagttcgacatgctcatgtccaaaccctaaccaaactgggatgcatggttttgatgcacaatcgattcagattatcagaagatctagatatatatactactgattataaccaagtcaaaaatatacaatcgatgatcgaagtaattaaacagaccaattaaaaacttaattgagaagtggtacgagcaaaggagaagtcagatctagtagcttagtagctgcctattagcttaggtagcttcttggggaggcaactctacatgtacttacttaggtcttgcaacaaaactaacccacatagcatgattacatgcttgaatcaaaggaaccatgcatgttctttcctatcttaatttgccttttgatccatctcatgtactgtgttcaattattttccccaaggcaattatattgtcacaccatatatgatgaccctctcacaaacacaaaacttaagctacctattcactctctcttttcaaaggaactcaatattgatcatcatacataaaacaaccttgttttcatggtacataattttgtaaaatccatgcgttttagatcaaagattaatcatcataaaaaacacaacaattttaattgtaaataatcgtgtaaagttagatcaaagattaatcattgtacagaaaacacgacaatttcaattatattatatttagttccgtaaaattcatgcgttccaatcaaacaatgtccatattttcataatggtaagtaacctaagccaaaacctaaggggggcaagagacaaggtgtggtgggcataggagtaccaaagccaaaagctaagctccaatgtagagatcacccagtagtatagatatagagcatttgcatgctgatacactgacatggacaagaagaaaaaataaaggaaggaatttgtgcagagatcagtttggcgcatgcagatgcagcagagaagcctttggattcgtcggggagagtgctctcgctctcgccgcgcgcggcgcggcgcgacaagcgcgcacgcccgtgccagagcgcgctccccaaaaggcgatccagagcgccgcgccgtgcgcgcgcgcatgcaaaggctgcgccacgccacgccacgccacgccgcgccacggcccccgcgatttttgtagcttttcctccatcctcgcatgcacctcctccactactactactcagcttccccgtctcttctccctcctctccttcctacctagctacctccactacacttagctagtgccagccactgcacgctgtgttctgcagcatgcgcccaaagcttgagacctctctaatgatggcgcgagctgagctgacggatcgagcactgattggtgtttgtgtgttttgtggtgtttgcagacggacaaggcgtcgctgctggcggaggtgatcgagcacgtcaaggagctgaagcggcagacgtcggcgatgatggaggacggcgccgcgggaggggaggcggcggcggcgccggtggtgctgctgccgacggaggacgacgagctggaggtggacgcggcggcggacgagggagggaggctcgtggcgagggcctcgctgtgctgcgaggaccgcgccgacctcatcccgggcatcgcccgcgcgctcgccgcgctccggctgcgcgcccgccgcgccgagatcgccacgctcggcggccgcgtccgcagcgtcctcctcatcgccgccgtcgaggaggaagatccagacgaggccgggaacgacgacgacggcgaacacggctacggcgttgccgcctcgcaccggaggcacgagctcgtcgcgtcgatccacgaggcgctgcgcggcgtcatgaaccgcaaagcggcgagcagcgacacctcctcttccggcgccggcggcggcggtgggagcatcaagaggcagcggatgatcagtgcacatgatcagcaaggttccttcaattctagtggctggtaaaaactcaagtcgatcatcgatccatccattaattcctgcagcctcatcagaagtagcatgaaatatccatgctcttgcttatgcaactcaacttatattagtatagttataaagctatatatagccgacttaaaaaaaacttagagtttggatcttctttttggtgttatggtgtgtgcatgagggaaatcaaaattaaaggaaggagaaaatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0432800, RefSeq:Os08g0432800