Os08g0433000

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0433000| Description = Arginine decarboxylase family protein| Version = NM_001188666.1 GI:297726462 GeneID:9268216| Length = 2453 bp| Defi...")
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Gene Name

Os08g0433000

Description

Arginine decarboxylase family protein

Version

NM_001188666.1 GI:297726462 GeneID:9268216

Length

2453 bp

Definition

Oryza sativa Japonica Group Os08g0433000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21083350..21085802

Sequence Coding Region

21083350..21083519,21085252..21085528,21085587..21085802

Expression

GEO Profiles:Os08g0433000

Genome Context

<gbrowseImage1> name=NC_008401:21083350..21085802 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21083350..21085802 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggagaaggcgaacgcaacgtgtaggtgctgctcggctacgccggcggaggcgcaagcctatagtctccagcgccagtggatctgttgcagggagcctgatgcacaagcttttgcaatagcggatctgatgaaggagccaacgattttgtgtctcccaaagctgagcaacctgtccgtgttcacctccctgccggacatgtgggcaatcgggcagatgttcccaatcatcccaatccagtgccttggtgagcgccctgcaatcgacggcgtcctctccgacctcacctccgacagcgacggcaaggtcgaccacttcatcagcgggaggcacagcctgccgctgcacgagctccccgtccacggcacccgcggctactacctcggcggcacctaccaggaggccctcggcgggctccacaacctgttcggcgggccgagcgtgcacgagcacgaggtgttcaagcagagaaccgacggcgccaccgccgccgcactcgccaaagcgttcggcgcaatgccgtacctgtcgttctacccggaggccgcagcgatggccagaggggagagcagcggcatgagcagcgactcggaggtgtcggccgccggcgtggccgaggatgatgatgagtgggagttcatgcgcgggctcatcgtgtga</cdnaseq>

Protein Sequence

<aaseq>MQEKANATCRCCSATPAEAQAYSLQRQWICCREPDAQAFAIADL MKEPTILCLPKLSNLSVFTSLPDMWAIGQMFPIIPIQCLGERPAIDGVLSDLTSDSDG KVDHFISGRHSLPLHELPVHGTRGYYLGGTYQEALGGLHNLFGGPSVHEHEVFKQRTD GATAAALAKAFGAMPYLSFYPEAAAMARGESSGMSSDSEVSAAGVAEDDDEWEFMRGL IV</aaseq>

Gene Sequence

<dnaseqindica>1..170#1903..2179#2238..2453#atgcaggagaaggcgaacgcaacgtgtaggtgctgctcggctacgccggcggaggcgcaagcctatagtctccagcgccagtggatctgttgcagggagcctgatgcacaagcttttgcaatagcggatctgatgaaggagccaacgattttgtgtctcccaaagctgaggtggttcgagaagctttgccattagaatgagcccaggtactcttttctactactctttttccatcactctttcttctctggtgtttatttctaccctttcaccttgttaactatactaagttcttggattttggtgatgacttcttgcagggtcaatctggataaatacacacatgactacaggccaccttggtggatacaaacacctttctttgttctttctagttcttgcagattaattcatactccttctagattgtggagaagtattttttgacagattgtggatgcaaaccatcttgcagattgtggagtagtatttttttaacgatttcttttttcaaactagaggttcttaattttttgttagcatattcggtttaaaacttcatttttttttctggatacctgtgtaatcgatgggtgcagagaacccagttaaaccttttttttcagtgaggacagtgtagagaacacagtacaattctgtgtaatgttgttgttgagggcattttggtattttcatggttgtactaagtttgcattgggaatccaggagttgaattattgtgggacggagggagtatatcagcatttgtgtctcgtgtttcaaaacgcaacatcttgctagacttgtaaatttgtaaccaaattaaaattaggtcgcaccaatgtactccctccacccacaaaagttacacatattattttgacatcaagaccaaggaaaaactaaatcaccttagatgttacaaaattaaggagtgaatgtaagcatgcaaccaatgagtatttagatgactccttgtgttctaataaaacatctcttcatttaattcttgaatgcataaagattacaaataggaacaacttatttggaaaaactcaggaaaaacttatttggaaaaactcaaatgtaaaataggtgtaacttttatagatggagggagtatgcttagactctagcccgtcaccacgcaacatcatggtgtgttccaacttccaccaacaaaggaaaaagtacaccgaaggtccctcaacttgtcatcgggatagaaaaacgtcctcgaaccgcaaaaccagatatgcggggtctcttaactatacaaaacggtcacaataggtccctcggcagttttgattccggtttttgtcctacgtgctgctgagtcagcgtgggacccacgtgggccccacatgtcagcccagccttctctttctttcccctcttttctctcttccccttctctctctctctctcactcttctctctatggctctgggcaggccggcgccaccagccgacgggtggggaggaaggcggcggcggcagcctcctctccgtgctcgccaacgaggatgagcagtggcggagctggagccacacgcgcgaggaggaggagccctcagcgccgggtcataccaccctcctagacgccggcgacgacggttgggttcttggcccgtggatagcttcgacgaggctctctcctgaccgccggcgtggggtgcccgagatccaaaatcccgtcctggagttcttctacctccccttccaaaactctcttttggcatccttgatacaatttcccttccctttctttctttccatttctttttcttgctttagatttcttcttcttgctaatctcgatccatccatccaaacacctcattcttttttcctttgatttgattcttcgctgtccgtgttcgtgttcacgtaccacagcaacctgtccgtgttcacctccctgccggacatgtgggcaatcgggcagatgttcccaatcatcccaatccagtgccttggtgagcgccctgcaatcgacggcgtcctctccgacctcacctccgacagcgacggcaaggtcgaccacttcatcagcgggaggcacagcctgccgctgcacgagctccccgtccacggcacccgcggctactacctcggcggcacctaccaggaggccctcggcgggctccacaacctgttcggcgggccgagcgtggtgcgcgtgtcgtagagcggcggggccttcctgcgccgacgtggtccgctcgatgcagcacgagcacgaggtgttcaagcagagaaccgacggcgccaccgccgccgcactcgccaaagcgttcggcgcaatgccgtacctgtcgttctacccggaggccgcagcgatggccagaggggagagcagcggcatgagcagcgactcggaggtgtcggccgccggcgtggccgaggatgatgatgagtgggagttcatgcgcgggctcatcgtgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0433000, RefSeq:Os08g0433000