Os08g0434100

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0434100| Description = Similar to S-like ribonuclease (RNase PD2) (Fragment)| Version = NM_001068412.1 GI:115476561 GeneID:4345656| Length ...")
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Gene Name

Os08g0434100

Description

Similar to S-like ribonuclease (RNase PD2) (Fragment)

Version

NM_001068412.1 GI:115476561 GeneID:4345656

Length

2114 bp

Definition

Oryza sativa Japonica Group Os08g0434100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21138733..21140846

Sequence Coding Region

21138800..21139060,21140022..21140450

Expression

GEO Profiles:Os08g0434100

Genome Context

<gbrowseImage1> name=NC_008401:21138733..21140846 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21138733..21140846 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgagggcaacggcgcgggtcgggcttgcgctgctgctcgcggtggtgggcgtcggcgcgcaggactacgacttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgctacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaaccgcgacgacggcagctacccgcagaactgcgaccctgacagcgagttcgacccctccaaggtgagcgacctgctggggagcatgcgctcggagtggccgacgctggcgtgcccgagcaacgacggcatccggttctgggcgcacgagtgggagaagcacggcacctgcgccgcggcggcgctcggcgacgagcacggctacttcgaggcggcgctccgcctccggtcgcggctgcccgtgctcgccgcgctgcgcgacggcggcgtgtcgcccgacggcggctactacacgctgtcccagatcaagggcgccatccagcgcggcgtcggcgccgagccgttcgtggagtgcaaccgcgacgagtccggcaacagccagctgtaccagctctacttctgcgtggacgccgccggcgagcgcttcgtcgactgccccgcctcccccggcggccgcccctgcggcaatcggatcgagttcccggcgttctag</cdnaseq>

Protein Sequence

<aaseq>MAAAARATARVGLALLLAVVGVGAQDYDFFFLVLQWPGSYCDTK QSCCYPRSGKPAADFGIHGLWPNRDDGSYPQNCDPDSEFDPSKVSDLLGSMRSEWPTL ACPSNDGIRFWAHEWEKHGTCAAAALGDEHGYFEAALRLRSRLPVLAALRDGGVSPDG GYYTLSQIKGAIQRGVGAEPFVECNRDESGNSQLYQLYFCVDAAGERFVDCPASPGGR PCGNRIEFPAF</aaseq>

Gene Sequence

<dnaseqindica>68..328#1290..1718#tcatcatcagagagagaaggagagagaggaagagattgcagtgagtgagtgagtgagtgaagcagccatggcggcggcggcgagggcaacggcgcgggtcgggcttgcgctgctgctcgcggtggtgggcgtcggcgcgcaggactacgacttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgctacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaaccgcgacgacggcagctacccgcagaactgcgaccctgacagcgagttcgacccctccaaggttcatcctcttcttcctctcggttcatttgtgtcatggtgtctctgttgatgatgatgatgatgttgttgttgttgtttttggtttgttgctgtctgtctgatgaagcctctggttttcttctgttgggattctatgtgatcgactgatcctgttaatttggagtttttgttcttctgaaaccttattgtctcttttcatttgatgattttgttttttatttatttgatgatcttttgtttgaaagaactaagtcaatccaagacatcattgaaaagatttttaattcaagattgatttcagagtaaagcaaggaagcagacgaaacagaggtcatccttgccttggtttctactcaactgcacttacctcttactttaattgctcttccaatcaaacagcaacattacctattttgggtgtgatttcgtaatctgcaaataaatccctgtctgatttctccaccccacaataaaacaatgataaaaaaaaccccattatcctcacaaaagactatctttttttttatttgcaaagatagaaacttaaaaccgagattaaaatgctcccccccccctacttgtaaagatatgtccagtatgatttactaatctccaagtcattgctaaaaaaccctttttcccctaaaaagctcctttttttttcttgagagactcagaaataagagaaattgaaaaactttttcctacttgtaaagagttttttcccagtgttcaccaagcaattttcccaagtaaaaaactgtgatttatttttttgtaccttacaactaaaaagcctttttttttctctttataagaaaatatgctttccctacttgtaaagaattttttccccagtgtttatcaaccaatttccccaattaaagaagtgaattttgcaggtaaaaaggtaaaaaactaaaacaaaaccttttgtttcttgtggacttgtggttcaggtgagcgacctgctggggagcatgcgctcggagtggccgacgctggcgtgcccgagcaacgacggcatccggttctgggcgcacgagtgggagaagcacggcacctgcgccgcggcggcgctcggcgacgagcacggctacttcgaggcggcgctccgcctccggtcgcggctgcccgtgctcgccgcgctgcgcgacggcggcgtgtcgcccgacggcggctactacacgctgtcccagatcaagggcgccatccagcgcggcgtcggcgccgagccgttcgtggagtgcaaccgcgacgagtccggcaacagccagctgtaccagctctacttctgcgtggacgccgccggcgagcgcttcgtcgactgccccgcctcccccggcggccgcccctgcggcaatcggatcgagttcccggcgttctagagctctgagctctctctctctaaccagcctcttctcctagctctacggggaagactctaccttcgaagcatgtcctttgtcactgacacgtgggttcgatgaaccatgggttcacttgttcagtgataaatgtatggtgtctttgaaggtataggatctcaattcgggaaaacgtcgacgacaaagaattgatgatgatttaatccatttcagtaatccatgttattgattacggagtaattattaatctgaccgtgtttttttttaattctgttgttgcaataaaagtatggccatgtaatgtttctctcttttttccccgcataatttgaacaagtttaggggggaagtggaacatataaatcaaagaaagaaatgaaatttacatgaattttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0434100, RefSeq:Os08g0434100