Os08g0436100

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0436100| Description = Nucleoside phosphatase GDA1/CD39 family protein| Version = NM_001068421.1 GI:115476579 GeneID:4345665| Length = 4072...")
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Gene Name

Os08g0436100

Description

Nucleoside phosphatase GDA1/CD39 family protein

Version

NM_001068421.1 GI:115476579 GeneID:4345665

Length

4072 bp

Definition

Oryza sativa Japonica Group Os08g0436100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21278231..21282302

Sequence Coding Region

21278368..21278956,21279197..21279312,21279405..21279512,21279650..21279704,21279929..21280123
,21280538..21280635,21281380..21281576,21281655..21281741,21281834..21282002

Expression

GEO Profiles:Os08g0436100

Genome Context

<gbrowseImage1> name=NC_008401:21278231..21282302 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21278231..21282302 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccgccccaatgcccgcgcccatcacccgcgtggcgaatcgcaggaggcggcggcgacaaccctagctcctcctcctcgtccgaccatttcctccgcgatgggctcccgccgcgcccgcggccgccgcctcctcgccgccctcctcgccgccgcgttcgccgtcgcgctcctcctgctggtgccccgctcgccgcgtcgtcgtccccacgagtacggcgtcgtcatcgacgccggtagcacggggagccgcgtccacgtcatcgcctaccgctcctcctcctcctcccccgcctccgcgctcccgcggatcgactgggcgcgcacggcgtcgatgaaggcggccccggggctgtcgtccttcgcctccgacccgggcggcgcgggccggtcgctggcgccgctcctggagttcgcgcgccgccgcgtgccgccggagagctgggcggagaccgacgtgcgcctcatggccaccgcggggctccggctgctcgacgccgcggtggccgaggctgtgttggattcgtgcagggtgttgctgcggggatcggggttccagttccaggacgattgggccaccgtgatctcaggagctgaggaagggatgtatgcatggattgcagcaaattatgcgctgggtaccctaggcgatgactcacaagatactacggggataattgagcttggtggagcttccgttcaggtaacttttgttacggacaaacctttgcctccagagttctctcatactctgaagttcggtgatgccacatataatctgtacagtcacagctttctacaacttggtcagaatgttgcgtacgaatcactccatgacatgctgagcacacctgggcataaatcaatggcaacacatttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgcccatggagggagcagttaaacttcctgccagtgttcttgagtcgaaggttgagtacagaccttatgctcatgctgttggtaacttctccgaatgtagatctgcagcactaacactattgcagaaaggaagagaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagaccttgatgggaaatttttagcaacagagaatttctaccatacttccaagttctttaggttgcgttctaagtcttttctttctgacctgatgctggctggggagaaattttgccgaggagactggtcaaagattaaaaaggagtaccgttctttcaatgagggggagctgcttcttttttgcttttcctcagcatatattgttgctttgctgcatgatactctaaaggtcccgctggatgataagaggattgatgttgcgaatcaaattggcggtgtgcctgttgactgggcattgggtgctttcattgtgcagaaggcgtcaaaccagacagacatgctccatcctgagggggagaagatctcgcctgaagacggtatacgacatggagaaaggccggtacatcataaccagggtgagacgatgagccttgcgcgtcgtcgctgggatttggtggagctcctgcggtggggtgccagtgatcgtgtttgtaaattctcgtag</cdnaseq>

Protein Sequence

<aaseq>MRRPNARAHHPRGESQEAAATTLAPPPRPTISSAMGSRRARGRR LLAALLAAAFAVALLLLVPRSPRRRPHEYGVVIDAGSTGSRVHVIAYRSSSSSPASAL PRIDWARTASMKAAPGLSSFASDPGGAGRSLAPLLEFARRRVPPESWAETDVRLMATA GLRLLDAAVAEAVLDSCRVLLRGSGFQFQDDWATVISGAEEGMYAWIAANYALGTLGD DSQDTTGIIELGGASVQVTFVTDKPLPPEFSHTLKFGDATYNLYSHSFLQLGQNVAYE SLHDMLSTPGHKSMATHLISQAKYRDPCTPRGFSPMEGAVKLPASVLESKVEYRPYAH AVGNFSECRSAALTLLQKGREECRYHECRMGAAFVPDLDGKFLATENFYHTSKFFRLR SKSFLSDLMLAGEKFCRGDWSKIKKEYRSFNEGELLLFCFSSAYIVALLHDTLKVPLD DKRIDVANQIGGVPVDWALGAFIVQKASNQTDMLHPEGEKISPEDGIRHGERPVHHNQ GETMSLARRRWDLVELLRWGASDRVCKFS</aaseq>

Gene Sequence

<dnaseqindica>138..726#967..1082#1175..1282#1420..1474#1699..1893#2308..2405#3150..3346#3425..3511#3604..3772#acacgtgggcccccacgcgcccctccccgcaccggatcccatccacctcgcggcccgccgcgccggcaccaccaccaccacccctcgccgccgacgcgtcgccgtcgcctctcctccgatcgatccccccccctcgcatgcgccgccccaatgcccgcgcccatcacccgcgtggcgaatcgcaggaggcggcggcgacaaccctagctcctcctcctcgtccgaccatttcctccgcgatgggctcccgccgcgcccgcggccgccgcctcctcgccgccctcctcgccgccgcgttcgccgtcgcgctcctcctgctggtgccccgctcgccgcgtcgtcgtccccacgagtacggcgtcgtcatcgacgccggtagcacggggagccgcgtccacgtcatcgcctaccgctcctcctcctcctcccccgcctccgcgctcccgcggatcgactgggcgcgcacggcgtcgatgaaggcggccccggggctgtcgtccttcgcctccgacccgggcggcgcgggccggtcgctggcgccgctcctggagttcgcgcgccgccgcgtgccgccggagagctgggcggagaccgacgtgcgcctcatggccaccgcggggctccggctgctcgacgccgcggtggccgaggctgtgttggattcgtgcagggtgttgctgcggggatcggggttccagttccaggacgattgggccaccgtgatctcaggcatgctacataatgaaagcgtagaattcttatcttttgtatatagtggaaaagtgcggagccacagttctttcatgctactgatcaatacgatatcgaatggagttcatttcaattgcctgtttagggatgggattgtgtttgatctgggctgatttgtgcgcctgcgtgcatgatagtttggaataattgggtacttttgttcaggtgatcataaaattgcttattactttcgtgcaggagctgaggaagggatgtatgcatggattgcagcaaattatgcgctgggtaccctaggcgatgactcacaagatactacggggataattgagcttggtggagcttccgttcaggtttcatgtatcgttttcacacgaatgaattgaacttcatgcaatgaaagtttgtcaggatgtcttattattgtaccctttttgttgaataggtaacttttgttacggacaaacctttgcctccagagttctctcatactctgaagttcggtgatgccacatataatctgtacagtcacagctttctacaacttggtcaggtgatttgtgcaaatatttattattgtgtatttaactgttacctgtgatgagctatgatcattatcttagtttcatgtggcatcaataaacttttgggtaaaggtatgttacaatatcttgcttgtttcctgtgcagaatgttgcgtacgaatcactccatgacatgctgagcacacctgggcataaatcaagtaagttgatttgttaatatatgtgtagttgctaatgttactgattgagacttcactccattccaaagcttagattttagttgtttgctcatttaatatgccattgtctcttttccttttatatggttcctttctatgtccatgggatacacttacctaccctgtaaaacaactagcagtgcaattctttggtctttctacttaagatttgatttgttatgcagtggcaacacatttaatttctcaagctaagtacagagatccttgcactccaaggggattttcgcccatggagggagcagttaaacttcctgccagtgttcttgagtcgaaggttgagtacagaccttatgctcatgctgttggtaacttctccgaatgtagatctgcagcactaacactattgcagaaaggaagaggtatatatctgctcttgctgcattgagctgtcctttagttaagaacatatgtcacccttcagaggaaaatctttaatttaaaaaggttatttaactgatgagatattttgtgttgaggagtaaactgtaaagtatgaaaaatacatgctttgttgataaatgatcagaagttctctatacttcttattatccttgagaagatgacaaaaagcaaaagcaaagttgtctgtactgttgaatttgtttggaccacaacagccatgttctgttctctaaactcattcctaaggttgctatttcttgattcatgatttgcaatgtaaacaattcaatggtgtataccttttctggcagtttcttgttctttgattccataatataataaaaggagctgagaatttcctcctgttgcagaggaatgtaggtaccatgaatgccgtatgggagcagcatttgtaccagaccttgatgggaaatttttagcaacagagaatttctaccatacttccaaggtttatttcccctttctccctcctcctggttggccatttgggtgtctttcaaagtgtatttggtatgtgtagggaagacgagaattccaaaggcaaccttttggcttttcaccttttttgggataagttcaatatccccataggtcagaaccatatctcacaagacacaacacatggaactcactatggatgttttcggttgttgccagttgccaccactggtggcaacacgacaaggacaaaagaggataatgatgactgatcagctagtagaaaagagcgagaacatgataggctgcctagtggatctcatgttcatgacttcacatctgctgacatattaagaattctgggaaaatcttggaaaattaaaacaagaggattgcatttatgcaataaaatgacttagcagaatgtagagtgcccatgaatcaaaatggtatgctcctgtgcctcaaaatttggttagttccacaaaattcggttagtgccttgagatgtgtctttataacgtttgcccattgaggaaaatgatagtgcagccattgtaatatttctactcacaggccttctgcgccctctttaatgttaatttgttttatagtaggttgtgttttgtagcatgtcatttactataagtctatcgttttacttagattcagttccctgggtctgcgaggatggtcggcttgaacatttcaacttttttgtggaactaattttggatccttcattacttggcagttctttaggttgcgttctaagtcttttctttctgacctgatgctggctggggagaaattttgccgaggagactggtcaaagattaaaaaggagtaccgttctttcaatgagggggagctgcttcttttttgcttttcctcagcatatattgttgctttgctgcatgatactctaaaggtcccgctggatgataagaggtgcgatcttttctgctgttctaatatttctatttcacattttgaacttcaggatttaaaatgttcattttgtttcaggattgatgttgcgaatcaaattggcggtgtgcctgttgactgggcattgggtgctttcattgtgcagaaggcgtcaaaccagacagagtactcagattcatcagttccatatctaaacagctattactattctgggttggttccactcctcttcatttccgctgtcgttctatttacagcatgctccatcctgagggggagaagatctcgcctgaagacggtatacgacatggagaaaggccggtacatcataaccagggtgagacgatgagccttgcgcgtcgtcgctgggatttggtggagctcctgcggtggggtgccagtgatcgtgtttgtaaattctcgtagtatatacacgatatctgctaggcagccatatatatggttctgacgttgccttgctgaatgaatcttgactgtaaaagcagccctttgtagttaatacaacgatgtgggttgcttttgctgcaacggtcgtgtttccagaatgctcaatgatgtactggtctcaaaatattgctgatgacctgatgtatagcagcaattttgtctccgtaaaatgtacccaatgatttctcgagctgactagctaaaatttgtaaatgtacatccagagaacaaattatcaatatcaggtacacaaccacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0436100, RefSeq:Os08g0436100