Os08g0441500

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0441500| Description = Similar to Cinnamoyl-CoA reductase| Version = NM_001068444.1 GI:115476625 GeneID:4345689| Length = 7183 bp| Definit...")
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Gene Name

Os08g0441500

Description

Similar to Cinnamoyl-CoA reductase

Version

NM_001068444.1 GI:115476625 GeneID:4345689

Length

7183 bp

Definition

Oryza sativa Japonica Group Os08g0441500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21594479..21601661

Sequence Coding Region

21594664..21594874,21598212..21598564,21600708..21600896,21601066..21601220,21601315..21601492

Expression

GEO Profiles:Os08g0441500

Genome Context

<gbrowseImage1> name=NC_008401:21594479..21601661 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21594479..21601661 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccgtgatcgacggcgccgtcgctgccgacgccggcggcgcagccgcggcggtggtgcagccggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttccacaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcgccgccgagaagacggaggaggaggccggcgaggtccagggcgggattgccatccgagcatga</cdnaseq>

Protein Sequence

<aaseq>MTVIDGAVAADAGGAAAAVVQPGNGQTVCVTGAAGYIASWLVKL LLEKGYTVKGTVRNPDDPKNAHLKALDGAGERLVLCKADLLDYDAICRAVAGCHGVFH TASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVD ESCWSDLDYCKETRNWYCYGKAVAEQAAWEAARRRGVELVVVNPVLVIGPLLQPTVNA SVAHILKYLDGSASKFANAVQAYVDVRDVAAAHLLVFESPSAAGRFLCAESVLHREGV VRILAKLFPEYPVPTRCSDEKNPRKQPYKMSNQKLRDLGLEFRPASQSLYETVKCLQE KGHLPVLAAEKTEEEAGEVQGGIAIRA</aaseq>

Gene Sequence

<dnaseqindica>6788..6998#3098..3450#766..954#442..596#170..347#agaagaatcccagctaccaaatcgaacctaccaactcattcccgatcgatcgatcttaaaaaaaaactaatcgtaacttttctctctctctcctatctttagaactagcaggtagcaactgcttcgagtgtagtctggtgaacgtacgatctttcgttcgttcatcaagatgaccgtgatcgacggcgccgtcgctgccgacgccggcggcgcagccgcggcggtggtgcagccggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccaggcatgcacacacacggacgccataagctactacagctcgttcgttttagctagaggcttatagttatatggtgtgtgttgcgttgcgtgtgcagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttccacaccgcctcccccgtcaccgacgaccccgtacgtccaaccacacaacctcacctcacctcgcctcgccgccggccgacacggcggcgacaccaccattattttctcggtttctcacgctgttcatcatgggcgcccatggcgtacgttaattagttgcgactgacacgagtagcgcattgcatgtgtctttttgcaggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaaggaaaccagggtaggtgcatctgcaaaatctaatctaatttcttgatgatctctctctgcccttaattgcacgtactaattaaccttggataccttttgcttcatcatgttattgttaccttttttgctttggttcttttcactgagaaaatggaaaaagaaaaaaaaaactttgtatggatatgaattattacatgccactacctagctagctagtactaccaaccatgactcaaaagaattattatgtctggcttttgagccaaccaagacaggtgctcatcgatcgattgcctgtgtcgacgtgagcactaaggttaaaagctgcttcttttttttctttttaactagcgacgttcaccggcaaaaggacatggtgagattaagtttgggtgttactcacgtaaagcatgtgaccaatccggatcgatatgataggaacacacgtaataacacgccatgtagcttagcgtgacacctcggagttttctctgccttacagtgaaggactaggaagtagtaacatgattagcttggacgtacgacttattttatccattacaatatatccacactatttttttatggaaacggcaattttaatatatttaattatattttatttagtttatatatattagtataacataagaatctattttggaaattttgggaatttaagatagtttgtagctcacgattgttgtggttaattagtaggtaaattactattaattagtggttaattatatggaattttcgaacatgcattcagcatcgaagcgtacagttgatccaacagacacacatgtgcgccgtagaggttacaataactagaagtccaacgcacccagccactggaattgaacgccggcacgtcatttattaccgatgagtcaacggtcaaccgttaattaatcagttgtagtagtagctgaacgcatgcatgcatggtcacgattttcaagaacccagtaattggcctctaatttgttagtttctggaaggaaaaaaggtttaccttgtggacagtttttggctttttgcatcgcaatccgtcgggaaaaattcaagtagtatttttttttatctataagaaaaactatttttaagagctactgtacttttttcttagaaagcagatcacagctgagtgatccggcaatatatactccctccattccaaaatgtttgacgctgttgacttttttaaacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctttttctatcatttaatttattgttaaatatatttttatgtatacatatagttttacacatttcataaaagtttttgaataagacgatcaaacatgtttaaaaaaatcaacggcgtcaaacacctttgagaaggagggagtatctttcaaagcaatatatgttaggcgtgaagaaattaatattgtacgacgccgaaggtaacacatctttcatgttttaatttagcatacaaatattaaaaacattggcatgtttcggcaggcaaaagaataacatatgtatatactggcctcgatcttcgcaattatggaaataaatcaaacacacgtgcatacgaaagcgaaacccaatttaatttcttgtgattttgtaatatgaaaccgaaacttgactcccaaacctaaaactgtaccgcgtcccgcataattttctcgtggatccccacagagtaattaattcttctctgaaagaaaaaaaacctagtaccgatttttcacgtcgtattccatcagcatgtcctaattaattcacctaatatttgtaatagctttgcaataaccttcgtcaaagtcaagatacaacaaccagaatctttcggaaatgttcctaaggatagagcgaccgtacatttgtaggggtaggtgtgcttccattgtggatatactgatccaatttttttagagacactcagaggtagagtttacgtgtattcatttgtagggatgagtacggactcgttgtgaacgcgtttgtattatgtttctttcttcttaagggtagcttaggtttcaggactttgcgcttcaacataagctacgaacaattatttgcaatacttaatcctgtaaagtaaaagaaaatgaaaaaaatatatgaaatgatggtgcagaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccccaccaggtaaaattaatttcatctttattactacattcgtttcaggttataatattttctaacattgcccacattcatatagatgctaatgaatctagtcacacatatatatctagattcattaacatatactccctccgtacttataaaggaactcgtttaggacaatgtttaagtcaaactttcggaatataaatcataaataactcttaagttgttgggtttaaaaatataaaaattatataaatagatttttcttgaaaaatactttcataaaagtatacatatatcaccttttaataaatatttttatagaaacaagaagtcaaagttgtgttttggagaccgtgtcgctgttctaaacgacttcctttacaagtatggagggagtatatgaatgtaggcaatactagaaaatcttataatataaaacagaggaagtacttcttaattaattacttctcctaatcacgtcatcactacattaccaccatcatgctaactactctcttcagtatcagcatttactatgtgctgttaactatagttgatcactcgttaatttaaccccgtattagggtatgtttgagggagcttctagctgctgctgtttctcttagaattagaaacttcttcaaacagtctagttttttgtctagattttgagaagctatagtttaagaatccagaaaatgaactagaagttagaagctagctactaaccagctgtttctcagaatcttaagctttccgaacatgcccttactcccttagtagagttgcgacttctcctaattaaacacgtcattagtactacacccccaccacatcatgcaaactacgtactggtattgtcttaattgtcggcattaacgtacgctgtgttgttaactatagttatagaagtagttggtgcgtctgtggtcacgagaaacagagtctaaattgattatgagtttcatgtttgcttaattagttcattatttgttctctaatctccagtgaaaggggtgtttagccattaactaatgactaattagatagcagctgctagtaattaatttggtgggattggtaggtaaggatggataagacttgcctaccaattgcagcatcagctcaggttcaggtgaaccaactccgtttcagtccggtctgacgctagctagcttgagtttttactcaaagtaaaacaccacactcaaattaaggcctcaaagtaattctaagcaagttcatcgcactaggttacatacacatatgaacaaacaacatcgtgatcatctacatgagatccagagatcgagagatttgtgttggtggcaaaagttgatcgattttccatgcaacttgtgccacacaaatacaaccaaaatctgcacacgtccatgtcgaccaaagttggtgtgagactgagagggttgagatatattcccctgtaagccacaaccaaaccctctgctaatcttctactctgtctctgtctccttcctctcgatcgcatcagcgatgatcgatggagatcagcatcatcgagatcaccatcacgatcgatcgggtagaaatgcgtagcatcaagagagcgtttgttttctgaaaattgagtgtggcggtgtcgcgttgcgatccaagttggtccgcatcgtacgtgtcagattgttcgtttgtttctgtggctctgcattttgtcgtcgctggcaaatcacacgtacggctgggtactactaataaccttttgagagtgtcatgtcatcgcctatgcacgcatgacttcagagtcctgaagtgttagtttttagtttgcatgttgcgatcgtacatcattttggaaatggttttagtgtccgccaactgctacaaggattagttgtctaatgaacgtcataagatggaaatgctgataattgttagtatttaaggcgttataactaaagagtacgtagatgatgcaaatgctaagtcctcatacaaaaatgcaaacctttcttgactttgggaattagctgcttgtgggaagaagtcctaccaatcctggacatttaggaaggggtaggtcggaatagtggaattttctaggaatttttcttggttcttttctcagagaattttttttccttaaaatgtttgtttatgaacagaaaaaaaattattgctttagttaagccctgccttagacgtctggtgagcagtgtctatgcagctcttgagtcctaatgggtctcacctaatcatatattgtttgttagccacacacaaagggttacttgggagaaagcatgacaatccctcttgcaatcatttgctctgacttctttctagtatctcgactcagctagtgatataatagtattaatcaaggagaaattacgtcatgcttgagtatgttaactccttttttctaaaacaagaggaagcttcactcagaaatacgcaaacaagaaataaatattgacatctaggagtacaaaatcaatcggaatagcctgatttcaatgcacaacctgacaagcaaccaaaacgcaggaatattcagctttgcttttgtcaaaacgtcgttacagcggggttggactaagagcacccaccccacttgctaatattacttttcaaccggtatatcccgtaaaaaccttgctgaatttggctcatatttattcaagatcctgaattgtccacatgattgtttcaaagataccatgcctgactacatgtacgtgaataaacagtctaactcgatgtcgtaatcttaccaaacctcttgtactaccttcaagggtcaccaatacgtagcatgatgtcaggtcaggaactcgggatgctttaattgggtccaaggagaccaaggaatctcaagctcttcacaagtcaagccaatcgtgtttacacctgaattaaatcccatatactcccttcattttttaataaatgacgccgttgactttttctcacatgtttgaccattgtcttattcaaaaaatttatgtaattataatttattttgttatgggttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacgaatgatcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtagtataatttttctagttaatcgaattcccccaatttgcgacctgccataggatttgttatgtaaataggtatacgttaatgttccttttcattatgaatcgtaattgtatggccaaccattacggatcacaagataatgtgagaaaaaagaaacaaaattttcgtgcattacctctgaactgttactgatcctgtgttgccatcaggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcgccgccgagaagacggaggaggaggccggcgaggtccagggcgggattgccatccgagcatgaggaaaacagcagagcaaaagagcaggaaaaatgtccatatcgtgttagtgtttaccgtgctgtaaaaccaaagtagtagtgttcgctggtttgtctggtctgaagccctgtaatacacccctgttgttgttacatgtgcaccagagtgaccgaataagtatttctatgaagttctctatgttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0441500, RefSeq:Os08g0441500