Os08g0441600

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0441600| Description = Similar to Chorismate mutase CM2 (EC 5.4.99.5) (Chorimate mutase)| Version = NM_001068445.1 GI:115476627 GeneID:43456...")
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Gene Name

Os08g0441600

Description

Similar to Chorismate mutase CM2 (EC 5.4.99.5) (Chorimate mutase)

Version

NM_001068445.1 GI:115476627 GeneID:4345690

Length

2287 bp

Definition

Oryza sativa Japonica Group Os08g0441600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21611481..21613767

Sequence Coding Region

21611553..21611831,21612762..21612848,21612952..21613095,21613184..21613276,21613403..21613654

Expression

GEO Profiles:Os08g0441600

Genome Context

<gbrowseImage1> name=NC_008401:21611481..21613767 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21611481..21613767 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgatgattctctcctgcaggtatctgctcatctgcagcgcgacgcttgcgctgctgctgctgcgactgtgcagcgggctgagcctggacacggtgagggagttcctcacgagggaggaggacaccgtcgtgttcggcctcatcgagcgggccaagcacccgcgcaacacgccggcctacgaccccggctacctcgccggcggcggccatggccacgacgcctctttcgccgagatgttcgtgcgcgagtccgaggcggttcaggccaaggcaggaaggtaccaaagcctgcaggagattcctttcttccctttcagagtgcctttcacattggcacctccatataacttcacaaccgagctgtattctgcagccgcattagttaatgtgaatgatgccatatggagcatgtatttcaatgagttgctccctctcctggccaagaatggcgatgatggcaactatgctgcaactgtttcatcagatcttgtatgtctgcaggcactctcaagaaggatcaactatgggaggtatgtggcagaagtgaagttcataggcgaccagcagaactacacaactttaattcgtaacaaggacacggatgccctgatgaaattgttgacatctgaagcccaggaagatgtggtgaagagaagggttcagaagaaggccatggtgttcggtcaaaatgtgacattggatggaccagttgaaactggcaacagcaacagtagccaaacaagtttcaaagttgatccttcattagtgtataaactgtatgacaaatgggtgattccattgactaaacaagtggaggtcgagtacctgctccatcgtcttgattga</cdnaseq>

Protein Sequence

<aaseq>MAAAMILSCRYLLICSATLALLLLRLCSGLSLDTVREFLTREED TVVFGLIERAKHPRNTPAYDPGYLAGGGHGHDASFAEMFVRESEAVQAKAGRYQSLQE IPFFPFRVPFTLAPPYNFTTELYSAAALVNVNDAIWSMYFNELLPLLAKNGDDGNYAA TVSSDLVCLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDALMKLLTSEAQEDV VKRRVQKKAMVFGQNVTLDGPVETGNSNSSQTSFKVDPSLVYKLYDKWVIPLTKQVEV EYLLHRLD</aaseq>

Gene Sequence

<dnaseqindica>73..351#1282..1368#1472..1615#1704..1796#1923..2174#atctcattgttcttcttctttctccgtctctctctctctctctctcgctgtctttccgagcagcaagcagcaatggcggcggcgatgattctctcctgcaggtatctgctcatctgcagcgcgacgcttgcgctgctgctgctgcgactgtgcagcgggctgagcctggacacggtgagggagttcctcacgagggaggaggacaccgtcgtgttcggcctcatcgagcgggccaagcacccgcgcaacacgccggcctacgaccccggctacctcgccggcggcggccatggccacgacgcctctttcgccgagatgttcgtgcgcgagtccgaggcggttcaggccaaggtgcggccgtttttgatatctcaactctggactctagcttgctcctcttctttcttgctcctgtgtgttcttgttaggattcgaacttgcaatgcctgaactctgaagcagtatttgagttcatctcgtttttgtatctttttttatgctctttgttttgcttgcattgtcaaatgtcaacggtctgctatgtcatctggcggttgggagattaattgtcgagatgttgatgaccagaagttgttgtctaaatgttttgacttgagcgtatgaaaatcggagttggacaatttaattaattatctaggtgatggcctgaagttgttgctgtctaagtgttttgactagttgagcatatgaaaatcctagtcaaatgtttcatgctctcatcaaaattgtttgaataaaactaataatctctttcattttactctctccattctaaaatatagtagtaaggcttattagtttttggcttgttctccaacattttgctttgattattattttattttataatataattatacatcattaacaactactgaaattaacatcatacaaaaatattttcaaatatgaatacagtagtaccacttatattagcactaaaatatttgtattgttagtttcattattaatgaaaaaagttacaaatgttgattttctaataaatatacacgctttattaatcaaatcatgcatgcatgtctgatctgaaggagtgaagaactagagtagccatgccataaatgtgatatgtttactttaagcaaagataaagaataagcatcttgcagtggattcaaaaagcacacgtcaacattaaacggcacgttaccaatatgatgcgtgaattgtgacaaaagacatcaactaaacgttatttcagcatcactaatccacattttctgttggacttgtctacaggcaggaaggtaccaaagcctgcaggagattcctttcttccctttcagagtgcctttcacattggcacctccatataacttcacaaccgtaagcgttcagcttccatatcttttaaaaaaaatcatctagaacaatgctgaaaaaaatctcaaaatgatcttactgaaaccatggttcatataaatcgtaggagctgtattctgcagccgcattagttaatgtgaatgatgccatatggagcatgtatttcaatgagttgctccctctcctggccaagaatggcgatgatggcaactatgctgcaactgtttcatcagatcttgtatgtctgcaggtaacaatacatgctacactgcagatcttgaattcatatattcacatttcatcctaaatttacatggaaaggttcattcttattgtaggcactctcaagaaggatcaactatgggaggtatgtggcagaagtgaagttcataggcgaccagcagaactacacaactttaattcgtaacaaggtaattttatcatttcacctactcctacataataagtaacaagctgatcagtgttggagtgatcatgtacaacagtacaattattttttggagatgaatcatccaagtgaaatttgtccttcacaggacacggatgccctgatgaaattgttgacatctgaagcccaggaagatgtggtgaagagaagggttcagaagaaggccatggtgttcggtcaaaatgtgacattggatggaccagttgaaactggcaacagcaacagtagccaaacaagtttcaaagttgatccttcattagtgtataaactgtatgacaaatgggtgattccattgactaaacaagtggaggtcgagtacctgctccatcgtcttgattgaatcaagcatttatctagctaacctatttgttcaaagtgtaactaagttgtcacatgaaagattgaaatgatacaccaataataacatgcagcaaggtctgcagattgttcagt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0441600, RefSeq:Os08g0441600