Os08g0442200

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0442200| Description = Strictosidine synthase family protein| Version = NM_001068450.1 GI:115476637 GeneID:4345695| Length = 1606 bp| Defi...")
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Gene Name

Os08g0442200

Description

Strictosidine synthase family protein

Version

NM_001068450.1 GI:115476637 GeneID:4345695

Length

1606 bp

Definition

Oryza sativa Japonica Group Os08g0442200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21637727..21639332

Sequence Coding Region

21637887..21638376,21638491..21638757,21638967..21639262

Expression

GEO Profiles:Os08g0442200

Genome Context

<gbrowseImage1> name=NC_008401:21637727..21639332 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21637727..21639332 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctagtttctcgacggttttcctgctcctcagccttgtctgcctagcttcgccgtgcgccgcgcagcgcgtgatctgcgaagccccaccgtgcaccaccgcgtcgcaggtgaagacaaccccgacaaatcgcgcctcccacgtccgcctccccgaaggcgtcaccggcgccgagagcctcgccttcgactccagcaaccgtggccccttcaccggcgtctccgatggccgcgtcctcaagtggggcggcgactccgccggctggactaccttcgcgtacaaccggaattaccggagcaaccctacgtgcgcgtcgtcatctgaggagacggagagcacatgcgggcgtccgctgggtcttgcgttccacctcaagacggggatcctctacttcgccgacgcctacaagggcctgatgcgggttgggccgcggggtggccaggccgacgtgctcgccacggaggccgacggcgtgccgttcaattacctcaacggcgtcgacgtcgaccaggacaccggtgacgtctacttcaccgacagcagcaccaccatcacacgccgataccaagagaacatcatgaggaaccgcgacgcgacggctcggctgatgaagtacgacgcgaagacgaagcaggtgacggtgctgaaggaccggttgccgtacgccaacggcgtggccgtcagccacgacgggaggtacctcgtggtggcgcacacggggccggcacaggtgttcaggtattggctcaagggggccaaggccggccagtacgagctcttcgccgacctgcccgggtaccccgacaacgtccggcgagacgccaaggggggctactgggtggggctcaaccgggagaagattacgttcaacgtgccggcggcggcttctccggccaagcacctggtcggcgtccggctcaacggcgacggcgtcgaggtggaggagctgacggctgctagtagggctgtgacgctgagcgaggttgtggagagggaccgcaagttgtggctcggctccgtcgatctcgactacgtcggcctactgcagtag</cdnaseq>

Protein Sequence

<aaseq>MASFSTVFLLLSLVCLASPCAAQRVICEAPPCTTASQVKTTPTN RASHVRLPEGVTGAESLAFDSSNRGPFTGVSDGRVLKWGGDSAGWTTFAYNRNYRSNP TCASSSEETESTCGRPLGLAFHLKTGILYFADAYKGLMRVGPRGGQADVLATEADGVP FNYLNGVDVDQDTGDVYFTDSSTTITRRYQENIMRNRDATARLMKYDAKTKQVTVLKD RLPYANGVAVSHDGRYLVVAHTGPAQVFRYWLKGAKAGQYELFADLPGYPDNVRRDAK GGYWVGLNREKITFNVPAAASPAKHLVGVRLNGDGVEVEELTAASRAVTLSEVVERDR KLWLGSVDLDYVGLLQ</aaseq>

Gene Sequence

<dnaseqindica>957..1446#576..842#71..366#gtgtaacttagtccctcgaagtagtcgcttcttcttctcgtagcctcttcagatcgatcgcttcgtcgtcatggctagtttctcgacggttttcctgctcctcagccttgtctgcctagcttcgccgtgcgccgcgcagcgcgtgatctgcgaagccccaccgtgcaccaccgcgtcgcaggtgaagacaaccccgacaaatcgcgcctcccacgtccgcctccccgaaggcgtcaccggcgccgagagcctcgccttcgactccagcaaccgtggccccttcaccggcgtctccgatggccgcgtcctcaagtggggcggcgactccgccggctggactaccttcgcgtacaaccggaattaccggtacgtacgtgcatgtatagaattttgacttgtatgtttgcatggtgtgtgatattattatgtactatatatcttatcaaattttttaaaatttttatataactatttaaattacatgtatatacccaggtgccatgagacctaggtgtagaaaatactttcttacgtatagattggttgacgagactaacatgtatatatccgtgcaggagcaaccctacgtgcgcgtcgtcatctgaggagacggagagcacatgcgggcgtccgctgggtcttgcgttccacctcaagacggggatcctctacttcgccgacgcctacaagggcctgatgcgggttgggccgcggggtggccaggccgacgtgctcgccacggaggccgacggcgtgccgttcaattacctcaacggcgtcgacgtcgaccaggacaccggtgacgtctacttcaccgacagcagcaccaccatcacacgccggtacgtatacacagatcgagaacaatccaaattaatttactttcaaatttgcattatgcatgcaatgcgttgttgatcatcagcattaacaggagatgagttgtgtgcatgcagataccaagagaacatcatgaggaaccgcgacgcgacggctcggctgatgaagtacgacgcgaagacgaagcaggtgacggtgctgaaggaccggttgccgtacgccaacggcgtggccgtcagccacgacgggaggtacctcgtggtggcgcacacggggccggcacaggtgttcaggtattggctcaagggggccaaggccggccagtacgagctcttcgccgacctgcccgggtaccccgacaacgtccggcgagacgccaaggggggctactgggtggggctcaaccgggagaagattacgttcaacgtgccggcggcggcttctccggccaagcacctggtcggcgtccggctcaacggcgacggcgtcgaggtggaggagctgacggctgctagtagggctgtgacgctgagcgaggttgtggagagggaccgcaagttgtggctcggctccgtcgatctcgactacgtcggcctactgcagtagaaagaagttatctgtttagtggtgttaggaataataaaggcaggctaattaggtatttagcagtagaatcaggattggtacaactcttttttgctggcagctatattaattagacgttttagtagtcttttttcagtgtgtgcttgatatacacaccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0442200, RefSeq:Os08g0442200