Os08g0442300

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0442300| Description = Calcium-binding EF-hand containing protein| Version = NM_001068451.2 GI:297608647 GeneID:4345696| Length = 2466 bp| ...")
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Gene Name

Os08g0442300

Description

Calcium-binding EF-hand containing protein

Version

NM_001068451.2 GI:297608647 GeneID:4345696

Length

2466 bp

Definition

Oryza sativa Japonica Group Os08g0442300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21639910..21642375

Sequence Coding Region

21640260..21640329,21640454..21640578,21640720..21640816,21640907..21641016,21641549..21641623
,21642072..21642122

Expression

GEO Profiles:Os08g0442300

Genome Context

<gbrowseImage1> name=NC_008401:21639910..21642375 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21639910..21642375 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcacctcgtcgatgctgacgcagtacgacatcgaggaggtccaggaccactgcgaccacgccttctcgcagcaggagatcgtgtcgctgtaccaccggttctgccagctcgaccggaatgggggcggattcgtctccgccgaggaattcatgaccgtccccgagttcgccgtgaaccctctctctcagaggcttctgaggatgctcgatgggctgaactttaaggagttcgtggcgttcttatcggcgtttagtccccgcgcaagcctgcagcaaaaaattgaatttattttcagggtttatgacactgactgcaatgggaaggtggcatttgatgatatcttgagcatcttgcgggatctgtctggttcttttatgactgagcagcagaggcagaaagttttgatccatgttttagaagaagctggctatacaaaagattcaaattttactctgccagactttatgaagattcttgacaattctgatgtgaagatggaggttgaagttcctattgactaa</cdnaseq>

Protein Sequence

<aaseq>MGSTSSMLTQYDIEEVQDHCDHAFSQQEIVSLYHRFCQLDRNGG GFVSAEEFMTVPEFAVNPLSQRLLRMLDGLNFKEFVAFLSAFSPRASLQQKIEFIFRV YDTDCNGKVAFDDILSILRDLSGSFMTEQQRQKVLIHVLEEAGYTKDSNFTLPDFMKI LDNSDVKMEVEVPID</aaseq>

Gene Sequence

<dnaseqindica>351..420#545..669#811..907#998..1107#1640..1714#2163..2213#gttcatcccccacactgccccacacatccatcgccggattcgcctccgcctctcccttcctctcgtcggcggcagcaagcggcggcggcggcggagctccggattcgaggggaccaagcatcgcctgcagaggaatccgcctgaagggtaagcacccctcagctcgacgcatcgcgctctgcctccctctcgatttcctcgtctgctctagccgacgtcgaatcgtgatccctagcatcgtgtgttgatgcggaatcgtggttgaacatccagattggacttcgattccgggaggatccccgcccggatccgaattttggccgaccgggatccccgtctcctccgccgagatggggagcacctcgtcgatgctgacgcagtacgacatcgaggaggtccaggaccactgcgaccacgcctgtgagtttgcgcgcttgtgtttctctctttcgattggattctgaactctcaacgaagattgatgctgtctgccgctgttcccctccgatctgacctgctgattcggggtgttttgggagctaagtctcgcagcaggagatcgtgtcgctgtaccaccggttctgccagctcgaccggaatgggggcggattcgtctccgccgaggaattcatgaccgtccccgagttcgccgtgaaccctctctctcaggttacaagacataactagcctgttcctcaataccttttcttattctgtattgagaacgagggattaggaaaggaatgaattgggtgattgggtagatgtttgaggaatgctatttgttaatcgatgcgatgtctctgtcagaggcttctgaggatgctcgatgggctgaactttaaggagttcgtggcgttcttatcggcgtttagtccccgcgcaagcctgcagcaaaaaattgaatgtgggttcccagttcgtacttaaattctccatttgctttctgtcccggatgtctagatgttctgagaaatatgctatgttttctctgtagttattttcagggtttatgacactgactgcaatgggaaggtggcatttgatgatatcttgagcatcttgcgggatctgtctggttcttttatgactgagcagcagaggcaggtttgtgcttaagatctttggtgccatatcatatgtgctaacatatccatgttcatttatgtccataaaagcttgtgtagttgcaagtaattgtaatttgttgattgctcatgttgttgcaactacaatgctgctaaaattggtacctcacatgttgctctgagctggtagtcaagtggtcaattggtcataactgttgatcgactctaaatgcggaggactactttttttttgttccatgatcacattctaggccttgctggctgggataatttttggaatcaatagcgaattctaccttcgagtcaatttaactaaagcgtaatagtaatgtatttttggtagagcactctacagaatattttttttccttgtaagtaggattccgtctggtccgtgcttctgccggaccagcataataggttaatatacatcttggtttacttcgtaataaaataacatcatttttttatggtaaagtatactgtagtccttttctgctatactgatgtatgccacttatgcatttcagaaagttttgatccatgttttagaagaagctggctatacaaaagattcaaattttactctgccagactttatgaaggtaagctccaatctactactttattcccttagatctctttaaccttaacagataaatattttctgcactagtatcaggagcatacacattatgcttggtgaatcagatagatgttctagaaggaaaatatcttgtctgtatttgacaggtttaattttgaataagctgatatcactaaattaaaatctagttgtcatcatctccttatttgttctaaatcgagcatcccattcacttggttttatggcatttagctttgaaatatctattttgacctatactttccataccatgttattttgttaaataatgtagcattagcatgtgatcattttttcattaagaaatgaatggttttgattattgcaatcagcagatcttcgtatttacttgattgtagctaaaaattttcaccttttgtactcacgaaacttgtttttgtttccagattcttgacaattctgatgtgaagatggaggttgaagttcctattgactaagtacttgtgtcattgttctgtgccccggcatgtatgtcagcttgagaagatggattaattagaccctactagtactttttttatcatgtattaagctgtaattagtgaaacatctgtatttgatcattttcaggcttaattaacttttaccacccgtgcatcctatgacctttcaggtactgttaccctgtaaggtccccttcattttttcctaacatcttttcatattgaaaacgtctgtgatattatggct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0442300, RefSeq:Os08g0442300