Os08g0442400

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Revision as of 13:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0442400| Description = Similar to BABY BOOM| Version = NM_001068452.1 GI:115476641 GeneID:4345697| Length = 4396 bp| Definition = Oryza sa...")
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Gene Name

Os08g0442400

Description

Similar to BABY BOOM

Version

NM_001068452.1 GI:115476641 GeneID:4345697

Length

4396 bp

Definition

Oryza sativa Japonica Group Os08g0442400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21652099..21656494

Sequence Coding Region

21652358..21652539,21652638..21652720,21652864..21652872,21652969..21653057,21653232..21653305
,21653511..21653561,21653653..21653729,21655453..21656147

Expression

GEO Profiles:Os08g0442400

Genome Context

<gbrowseImage1> name=NC_008401:21652099..21656494 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21652099..21656494 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagcgacgcagcaacggcgagaccgccgccgcgagcagcgacgactctagctccggcgtctgcggcggcggcggcggcggtgaggttgagccgaggcggcggcagaagcggccgcggaggagcgccccgcgggattgcccctcccagcgcagctccgcgttccgcggcgtcacacggcaccggtggacggggcggttcgaggcgcatctctgggacaagaacacctggaacgagtcgcagagcaagaagggcagacaagtttacctcggggcttacgacggcgaggaagcggcggcgcgcgcctacgacctcgccgcattgaagtactggggccacgacaccgtcctcaacttccctctgtcaacatatgacgaggaattgaaggaaatggaggggcagtccagggaagagtacatcggatcgctccggaggaagagcagtggcttctcaagaggggtgtccaagtacagaggagttgcaaggcatcatcacaacggcaaatgggaggctcggattgggcgtgtgttcggcaacaaatacctctacctaggtacttatgcaacacaagaggaggcggccgtggcgtacgacatcgcggcgatcgagcaccgcggcctcaacgccgtcaccaacttcgacatcaatctctacatcaggtggtaccacggctcttgccgctccagcagcgccgccgccgccaccaccatcgaagacgatgatttcgccgaagccatcgccgccgcgttgcaaggcgtcgacgagcagccgtcgtcgtcgccggcgacgacgcgccagctgcaaaccgcggacgacgacgacgacgacctcgtggcgcagctcccgccccagctgaggccgctggctcgcgcggcgtccacctccccgatcggactgctgctgcggtcgcccaagttcaaggagatcatcgagcaggcggcggccgcggcggcgtcgtcctctggtagcagcagtagcagcagcacagactcaccttcttcttcgtcgtcgtcatcgctgtcgccgtcgccattgccatcgccgccgccgcagcagcagccaaccgtaccgaaggacgaccagtacaacgtcgacatgtcgtcggtggcggcggcgaggtgcagcttcccggacgacgtgcagacgtacttcgggctggacgacgacggcttcgggtacccggaggtggacacgttcttgttcggggatttgggcgcgtacgcggcgcccatgtttcagttcgagctcgacgtctga</cdnaseq>

Protein Sequence

<aaseq>MAKRRSNGETAAASSDDSSSGVCGGGGGGEVEPRRRQKRPRRSA PRDCPSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEAAAR AYDLAALKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRG VARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINL YIRWYHGSCRSSSAAAATTIEDDDFAEAIAAALQGVDEQPSSSPATTRQLQTADDDDD DLVAQLPPQLRPLARAASTSPIGLLLRSPKFKEIIEQAAAAAASSSGSSSSSSTDSPS SSSSSSLSPSPLPSPPPQQQPTVPKDDQYNVDMSSVAAARCSFPDDVQTYFGLDDDGF GYPEVDTFLFGDLGAYAAPMFQFELDV</aaseq>

Gene Sequence

<dnaseqindica>260..441#540..622#766..774#871..959#1134..1207#1413..1463#1555..1631#3355..4049#aaggctagccgcctcactccctctctctgtttcctcttcttcttcttcctcccgccggtcagctcagctcgcctcgtctcctccattttggcgacgcgagcgagcatattaaagctgtgccggcggctgcaactttgccgccatttatttagctccggctcttttaaaagctctcttctcctgctgccatcttcttctggttggcaccaccattccatatataccatctccctcctcctcccgcgctcgctcttcgccaatggccaagcgacgcagcaacggcgagaccgccgccgcgagcagcgacgactctagctccggcgtctgcggcggcggcggcggcggtgaggttgagccgaggcggcggcagaagcggccgcggaggagcgccccgcgggattgcccctcccagcgcagctccgcgttccgcggcgtcacacggtgcgtgcgttggctggccggattttctcaccggcgtacgttcgccgcactgggctgacagcgtttgtggtttggatttttttttttttggcgcgcaggcaccggtggacggggcggttcgaggcgcatctctgggacaagaacacctggaacgagtcgcagagcaagaagggcagacaaggtatcatcaccaatcactccattaatccaccttatagttgcatccctcgagctgctcgtcagacaatttgctcattctgatttcgctgcgttctctcttgttgctctgattttgcgatcggattggcgtggccggacgaacagtttacctcggtgagctcccaatctgaacattctgaaaccaaaatccatggccacgcagaaggattgtttgctgaccacctcactgtctgtgcgccggcgttgcaggggcttacgacggcgaggaagcggcggcgcgcgcctacgacctcgccgcattgaagtactggggccacgacaccgtcctcaacttccctgtacgtggcatacgcctctccaaaaatccatggcatctttctctgaactgaatcctctgcacaagcgttcttcggaacccttcaagaaatgcacgcacagtgcagcttgtttgattctgtttggttttctgaggaagattgttgctgtttttctcatgttggaactctctgcagctgtcaacatatgacgaggaattgaaggaaatggaggggcagtccagggaagagtacatcggatcgctccggaggtaaatattcagttaaccccatgttaccactgactttcaacaaagagaagttaattcagatcattacaaactttcagaaaaatccaaatcaaaacccattgaaatatgcttctctgatcagacatagtgaaatattcatgtctgagaagctgtgttttgaagtagttcttcttgattaagatcataaacctttttcaccctgcaggaagagcagtggcttctcaagaggggtgtccaagtacagaggagttgcaaggtagttaatcagtactaatctacactgaaggttccagttttctactgaacattgctagtagaatcagttaattaacagctgttttattcaggcatcatcacaacggcaaatgggaggctcggattgggcgtgtgttcggcaacaaatacctctacctaggtacttatggtaagtagtttgtgactttgttatatatgtatgcattaaaatgttcttaaactggtaatcagtcatctatcttgcgggtaaaaagctttgaaatagtataaattttacaatggaatagattcttcttatctgagtcagcttgcgttatcaaaaaggtagccattgggtgtcgttgttagataggtgacacctgttagttgcaaaggaaacagagaattttttagacacatccaagaacattgctgatgtgttggcttcaagacttcagacaagtagaacctaactactaactactcctttgcaaagacgaaaaggcacttggtgaagtaaagatgaaaaggcacattagagatagtttggaaagaatgtcactgaattcaaaagagctttcaaactatggctatccaaactaggattcgaagaaattgaataggataaagttcatgatctttgggataagattcgccgagttatgtttgaagcagccgatggccatactctggtagggccagttcatctgaatgccacagaaatgtttccgtacgctgtagctaaaagccgaccgatgcggtccagctctgactaggatggacgacctttgtttgattttgtgcgcaactatgtgcaaaatttccagcatgaactgaattgacgattttagacctgtttcctttcgtcaataattcataaatcaccatggcatccgtatgaattggccaccaactgttgtgtctagttgctgcagaaaccggtggcatgatgtgccgtgcatctgcacaaattcaaatcagttttattagctaaccgtaacgttgcctctttgtcacatctgtacaacaatacaagggacgtgcaatccagaaaaaaaaaaagtccacaacgaccggtatgttgaacaagtcggtatatgtggattatttgcttcacacttcttttaaaaaatgtggtgcatttcttcttggttcacttgctataagttacttactctgtcctaaaataaatcaatctaggtgacgatctgacacaatcacacaatctctttgtccagattcattgtaccacctagattggtttattctttatgtattatgtatttattaggtttattatatataatatttaagttttcgtataatcaagtagataatctatcaacatacatatgcgagcaatatgtttgaaacactaattctaaaagtacactttgaagtcaaggacggaggcaggagtttgctaagcctaaggctcaacaaatgtaacttgttagattttcaaaattttcaattttttttggatgaatttaaatgggattgatttagcaagcgcactttatagtcgttatattccctcctgtccgtggggcccacagacagacaggcaccaagcagtggcaactggcaaggccactggttcactgggcctggacgcaggcaggatggcaggagacaggagtcccaggcagccacacgccacagtgacccactcccacacccaactcagcaatgcacagccacaaaaccaaaccacgctctttctttcttcttcttcttttttttttccttttcttttctctttttttgcgggagaaacctcgctcatctcatctaagccaccatcttgtttttttctgaacgaaatttaccatttcatatggatttcctctgctatgttttttttatttgttcatggctcacggtgctcttttttccgtacgatctgtcagcaacacaagaggaggcggccgtggcgtacgacatcgcggcgatcgagcaccgcggcctcaacgccgtcaccaacttcgacatcaatctctacatcaggtggtaccacggctcttgccgctccagcagcgccgccgccgccaccaccatcgaagacgatgatttcgccgaagccatcgccgccgcgttgcaaggcgtcgacgagcagccgtcgtcgtcgccggcgacgacgcgccagctgcaaaccgcggacgacgacgacgacgacctcgtggcgcagctcccgccccagctgaggccgctggctcgcgcggcgtccacctccccgatcggactgctgctgcggtcgcccaagttcaaggagatcatcgagcaggcggcggccgcggcggcgtcgtcctctggtagcagcagtagcagcagcacagactcaccttcttcttcgtcgtcgtcatcgctgtcgccgtcgccattgccatcgccgccgccgcagcagcagccaaccgtaccgaaggacgaccagtacaacgtcgacatgtcgtcggtggcggcggcgaggtgcagcttcccggacgacgtgcagacgtacttcgggctggacgacgacggcttcgggtacccggaggtggacacgttcttgttcggggatttgggcgcgtacgcggcgcccatgtttcagttcgagctcgacgtctgaactctcaactccgaccagggtgtttcgggaggcccacaatcccagcctgttcccgtagatgggctggaaagatcgaatcaaatttgggcctattcaggggatgggctgggagaattgatatgggccggcagggatggccgaaagggaaggcctcccaagttttggctgtcaagaagctagaactgagttctctctcaaaagagagagagagagagaagctagaactgaggattagttgcttactcgcaaatactagtagtttggaggaagagtaaaatattggtttatttgttgcccatctctgcgaaggggaatttaccgtaataaagagtacatattgccgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0442400, RefSeq:Os08g0442400