Os08g0451500

From RiceWiki
Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0451500| Description = Conserved hypothetical protein| Version = NM_001068482.2 GI:297608670 GeneID:4345729| Length = 4346 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0451500

Description

Conserved hypothetical protein

Version

NM_001068482.2 GI:297608670 GeneID:4345729

Length

4346 bp

Definition

Oryza sativa Japonica Group Os08g0451500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22142358..22146703

Sequence Coding Region

22142358..22142365,22142451..22142688,22142839..22143012,22143088..22143223,22143670..22143701
,22144435..22144491,22145482..22145535,22146506..22146703

Expression

GEO Profiles:Os08g0451500

Genome Context

<gbrowseImage1> name=NC_008401:22142358..22146703 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22142358..22146703 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggtgcacacgctgatcaatcctacggttgatcaatttctggaggcacaacgtgctttgcagccccgcttcatgtacttccagggtcagcagcttgacaaggaggaagaaattggtagacttgtctggggcgatgctgatgtatcggatccacagatattttcttcactcatttgtccgccttttcctaccatagtttatttggaagttccaagtggagaaaagattgctcaatctcttcaatcgaaggattcatctatattgaactcactagaggatggtttgaatgctcttctcaatattgaatttcgatggtgcaaactccaggatagagtcagtgctgctcctcctcttcatgttgattcaactctattagacggggtggttacaatatgttgtgatatcacaacatccagttcttcacacgtgtcactgcttcattctggcagtccgcaaacctgttttgatgacaagcttttggagaagcatattaagaaagaacttattgagagccgccggttagttcgtgttgtctcagttagcgaggatgatagaccatcttcagccgagcctttgacttcaatgtccgtggcttctggagcttccacttttgaagtcttgatgaccttacctaagtgggcagcacaggttttgaaatatcttgctcaagaaacgtcttacaaaagcctggttccacttggaattgcttctgtaaatggcactccagtatcttcgttcgatagacaagatgtggatcggcttcttttcttttgcacaaaccaagatgaagatgaagctattgcaaatggtctatatcaccatccgccaagatggtctgcatcccttgcgaaggacagagtgaagggaaatatggtgtcaaaaccagctaggtga</cdnaseq>

Protein Sequence

<aaseq>MQVHTLINPTVDQFLEAQRALQPRFMYFQGQQLDKEEEIGRLVW GDADVSDPQIFSSLICPPFPTIVYLEVPSGEKIAQSLQSKDSSILNSLEDGLNALLNI EFRWCKLQDRVSAAPPLHVDSTLLDGVVTICCDITTSSSSHVSLLHSGSPQTCFDDKL LEKHIKKELIESRRLVRVVSVSEDDRPSSAEPLTSMSVASGASTFEVLMTLPKWAAQV LKYLAQETSYKSLVPLGIASVNGTPVSSFDRQDVDRLLFFCTNQDEDEAIANGLYHHP PRWSASLAKDRVKGNMVSKPAR</aaseq>

Gene Sequence

<dnaseqindica>4339..4346#4016..4253#3692..3865#3481..3616#3003..3034#2213..2269#1169..1222#1..198#atgcaggtgcacacgctgatcaatcctacggttgatcaatttctggaggcacaacgtgctttgcagccccgcttcatgtacttccagggtcagcagcttgacaaggaggaagaaattggtagacttgtctggggcgatgctgatgtatcggatccacagatattttcttcactcatttgtccgccttttcctaccatagtaagcaccaaactatgctggttttctatgtactacatcatattatcatgtctaacttaaaccggcaaatgatagacaatacaagagccctagagggtctgcagagctggtgcctaggaaattagcaagcatattacataaaaattacacaatacaacactaaaatagcagcataagagcaccaaaggatggttagccgcctaatacaccatgtaatgcataatcgcaggtggctaacaggcgcctagcgccgatttttgggtagtgatgtttggctgcttggcgcttcagctcccatagcacctggactatgcttcttttagcgctgcagtttatagttatatctatatgctcccttacatgtttggtttactgatccactttagttattagtgtttgctgatgaagtttgccaatttgtataatttgggtgctagagcgcttgctaaagtagttatcaccactcttagcatacggtattgatcttttatttgagtgatcaatagtatgattaattcatgcatgcatgcagctgggattagagccaggcagcgatagcattaatactcttatggagctataaatatgggcatttaggttatctaattggatatcatggtttaatgcgatgaaaatatatgccttatatagttctgcagaggtagtagttcataattgcatgcatctaggctccctttgttactgaggtttattgtgatttaagggccaatttagagattaacagattggcccttaaaattacatattttaatttttgttttttaacccttggaagcttgtttatatattccaggtatatttttctgacttgtagctactaacaattaaatttcttcttcagcttcctctgcccattttcctgtttagtttaataaaagttgttctttccaatttttccttagtcttcttccttgtagctacttatcttaccttttaagctctaatacaggtttatttggaagttccaagtggagaaaagattgctcaatctcttcaatcgaaggtagtctgttttctgatattttcaagtagctgtttcttatttacatttgagcttgtagattgtttattgctgcaaatctcattttgccacataggtgggaatctgctttgtggatgcaatatccaaatgtccccatttattgttaaaaatatcattttcttgtagagtattatagagcttagtttccacaaaacaattactaaactgcatttgtttaacttgttttgactggcatagtgaggttctattgatggattttttatataattctgtgcttttaatatctgcagtactgtccattttcccacatgctgattactaatttatattttctggcaattttactaagctccccaccccctctcccccccccccaaaaaaaaaacaacaattcgtgctctgttattactttggaatcttatttctaatttcatatttgtaattttcacactctttcattgctaggggatttcatatataatgtattggagatattcattatcatcgtttgcagcatctcattttcgccattccttgatgtcagttgttccgaggtatctcatgtccatcttgcatttgttgaatatatttcaagccattaagttttgtgtatttatccaataattgtgtattcctgtttgtagctcatgcagccatgcatgggatgcatttcagcttgcatatacttcgtttgaacaatactgcgtaagaaataatgaggtgcaacgtctcatgcttgggcctcatctacttggggatgctccaaggatatatatcacccctcctggaaacaaaatggctgaggaagaagatacctccgaatattttccagacataaagatatacgatgaagatgtgcacttaaagcttcttatttgtggagcacattgcacccctataagtaaaagcgatcatgccgagatttttcttctaaaatatggcaatttttcttattccaaatcaatgattgtacttccatctcttttacaggattcatctatattgaactcactagaggatggtttgaatgctcttctcaatattgaagtatgtgtcaatcctttttctagttaccatatgttgctgctttttattttctacgtctaattagtgctgagttctgaatagagtattaccccagagacctattttgtcgaaatgctaggttattggagtaatgaagtatgtgatgctaacttacaaatcataaatactgctgcatcctaagtaatgtgctagtggccaccagtcagtattgctacttgtaagcagcttatacgagctggtgggtctaggttccatagtccatgcttgcatggttatggagtgaagcttgatgtagattgctcatagtctcactttctgagttgtaaattttcattttagactgtgcagcatacccacatccaagaacttagtagtagtggtggtgactggtgggtctgccatcccaccaccccctcttttggttggtgggatcttctaatttgtagatttatttttctgatggttgatgtgggattgcaaatgtatatgtttttttcatgaaatatataaaaattttaaaattggaacttgtatatttgttgattgttgcaatacactcatattttgctagcaccattttatgtaccatgaatttaggaacaagataatatggcacatactgctagtctctgttcatttttgtctagtaaaccgcacgagaaaaatgatgcaagtagcaaaattgttggtaggacctttttaatgtttttattttcttctctccttttttcagtttcgatggtgcaaactccaggatagagtcaggtatcttcaactgctgtataatacatattcaatatcttgcaacctgttgtatcttaaacattgttgctcacgtgtgagttatgtttgtgtctgtgtccttgcttcagtaatcatatcgtaattttctatgccacagaaatatttaaagctcaaactgatgatatatcaaatgagctaacttatattttgctgctataatttaaaggttaactgaggtaacatttccctataggctaaagacaaaactttatggtaacaaactaaatgcttttattggtatgtcttgtaaaatgtaaactacattgtaatagaatatttaacatgtatctttttgtaatcattttttaagttgtgcttcttattcttatttgcagttctgcatcgttgcttgcatgattgctataaaacttttagcttgtttctgctcacaacatttctctttgcagtgctgctcctcctcttcatgttgattcaactctattagacggggtggttacaatatgttgtgatatcacaacatccagttcttcacacgtgtcactgcttcattctggcagtccgcaaacctgttttgatgacaaggtatggttttgtatttatggagcatttttttagtcttcggtctgatatttgcagtgccattcgctttttctgtagcttttggagaagcatattaagaaagaacttattgagagccgccggttagttcgtgttgtctcagttagcgaggatgatagaccatcttcagccgagcctttgacttcaatgtccgtggcttctggagcttccacttttgaagtcttgatgaccttacctaagtgggcagcacaggttaattttctcagaaaagtttaaatgacactgactagacagcttggtaatatgtgtgatatactgacaatttatccactacgaaactaaaacatatcatgttttatacccttgttcatcactgactgaagattcgtttgaactgtgtaggttttgaaatatcttgctcaagaaacgtcttacaaaagcctggttccacttggaattgcttctgtaaatggcactccagtatcttcgttcgatagacaagatgtggatcggcttcttttcttttgcacaaaccaagatgaagatgaagctattgcaaatggtctatatcaccatccgccaagatggtctgcatcccttgcgaaggacagagtgaagggaaatatggtgtcaaaaccaggtaattcttaatgcaaacggagttggagtggactagaaacatcttatgaaagggattaacctattatttttcacgttcttttcagctaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0451500, RefSeq:Os08g0451500