Os08g0458600

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Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0458600| Description = CheY-like domain containing protein| Version = NM_001068506.1 GI:115476749 GeneID:4345758| Length = 5038 bp| Defini...")
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Gene Name

Os08g0458600

Description

CheY-like domain containing protein

Version

NM_001068506.1 GI:115476749 GeneID:4345758

Length

5038 bp

Definition

Oryza sativa Japonica Group Os08g0458600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22580754..22585791

Sequence Coding Region

22580961..22582106,22583083..22583129,22583703..22584077,22584586..22584747,22585572..22585686

Expression

GEO Profiles:Os08g0458600

Genome Context

<gbrowseImage1> name=NC_008401:22580754..22585791 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22580754..22585791 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcaagcgaggatctcgttcttcccggatggtctccgtgtgatgatcatcgacgacgacgcaaaggccgtcagaagggcaacggcgacgttgtcccaactgcagtacgcagtggtggcgacgcactccaccgcaagcgctggtctgcgtgccctctccggcgacaacgtggtagaaatccaagccatcctctgcgatgtccacaaggtggtctcctccggcttcgacttccgccgcgtcgtcgagtccgagcttcgcatccccgtcatctaccttctgtcgaagatggaggaggaggacatggtcgccggcgaggacgcggagttcctgaaccacctcctgctgacggcgacctacatcgtcaggaagccgctcaaccccaccgtgatggcccggctgtggagggtggtggcatggcgcatgtactgcctggaagaaaggattcaggccaatgtcgctgccaatgctggcgctggtggcgaagacgacgacgacgacgacgacgtagttatcgtcgaggagccccaagtgcacttcaaggtggtgagaagaacgtccggtggcagcaggaagaggcagctgacaatcaacgtcgtcgacgacggcaaccgcggcagcggcagcggcggcggcggcggcggcggcgcagatgccaacccaaccaggatactgcagcacatcactagcaacttacaggaattccgcacgaagcaccagaagaaggacatggccatcgagcgtcccctcatctcgtcggactccatgttcctcaaagccatcctcccgacgctcaaaatctcaccatgcaaccccctgaccctcactggcggcatcggttcaagcagtgtcgccgcggaggccttcgctggcggcagctcttcagctgcaccacttcaaattccagttttccagcagcaatccaccggcaatggcaacacggtgattagcttcagcaacaatgcttcaccgatggccatgcgtgcgccaaccgacaatactatgatatcgttcaacaatgtctctgctgcgccggtcgccaatgcggtgatctccttcagcaacatttctaggtctgctgccatgcaggcaccagcggcaagggggcaacatctgtccggtgatgtccagcagctggattttccccagcagaagctgtactttgggcccttctcctaccaagggcctccgccaccttccatgcacaaccacatcaacctactcccgccgacgtcctcccctgtgacctgctccatggacaaaggcaaggttcctattatcgagctcccatatgggatgcctgtggatgacttcctcgtcagtcaaaccacatatggcggtgccggaccatccatcggagccactgacgctgctgccgctgcgtacccttacacagatgcaccgagcaataacgttgcaactggctgtctcatggtgccaccaatggggccagcattcagtatcactgagccaactgtggtggcccaaggtgagggcaccggcaccggtgtcgacgccggcacatcagagaagaacgcgatagtagaagcaccaaacaaccccgcgccattaatggtactggatcaggttgctgctgatgctgcaatggatgttcaagaagacatcatgttctctttggaatctcttctggggccggactatgacctgctacctatggaagacgttagtgctccggacaccgctgcagccggtgatgcagctggtggctcactggacggagaggaaggcggcatggacattggttgggatctcgacctggatgacatcctggtggagaacgttaatgacttcgcgttcctggacaaccttgccgggagcgagtag</cdnaseq>

Protein Sequence

<aaseq>MDQARISFFPDGLRVMIIDDDAKAVRRATATLSQLQYAVVATHS TASAGLRALSGDNVVEIQAILCDVHKVVSSGFDFRRVVESELRIPVIYLLSKMEEEDM VAGEDAEFLNHLLLTATYIVRKPLNPTVMARLWRVVAWRMYCLEERIQANVAANAGAG GEDDDDDDDVVIVEEPQVHFKVVRRTSGGSRKRQLTINVVDDGNRGSGSGGGGGGGAD ANPTRILQHITSNLQEFRTKHQKKDMAIERPLISSDSMFLKAILPTLKISPCNPLTLT GGIGSSSVAAEAFAGGSSSAAPLQIPVFQQQSTGNGNTVISFSNNASPMAMRAPTDNT MISFNNVSAAPVANAVISFSNISRSAAMQAPAARGQHLSGDVQQLDFPQQKLYFGPFS YQGPPPPSMHNHINLLPPTSSPVTCSMDKGKVPIIELPYGMPVDDFLVSQTTYGGAGP SIGATDAAAAAYPYTDAPSNNVATGCLMVPPMGPAFSITEPTVVAQGEGTGTGVDAGT SEKNAIVEAPNNPAPLMVLDQVAADAAMDVQEDIMFSLESLLGPDYDLLPMEDVSAPD TAAAGDAAGGSLDGEEGGMDIGWDLDLDDILVENVNDFAFLDNLAGSE</aaseq>

Gene Sequence

<dnaseqindica>3686..4831#2663..2709#1715..2089#1045..1206#106..220#actcaaaacactcatcaatgaaatctgatcagcggtagctttttttttttctttctgaaggaacaaaagtgagcaatagctagcggtacatctctctctgtggcaatggatcaagcgaggatctcgttcttcccggatggtctccgtgtgatgatcatcgacgacgacgcaaaggccgtcagaagggcaacggcgacgttgtcccaactgcagtacgcaggtagattaatttggatgattttctgtatgagatttttttttaatcttgtttgtgtaatgtttcttcttgccgggattcttgtttgttcaatctgtgtatttttacggggatttcttgaggatgaaactcttttgctgttttctgtaggattattttcaagatcgacgaaatttttggttctctcggtgtctacgatactgtatctcttgcttctaaatgcttttattccctgatttgagatgaacaaaacatgtactagtatattgtctgatttttatgtacgtgggtcaagtatagtctgggaataaattaagtggcagtcagtaactcatctttatcaattcctaaataaaactgaccatgttgtttgatgttttgccatggtgattctttgtatattttttgtttgaaccactggttttagccctcttttatacaaaccatggatgtatgttcttgcttgtttcaactaaattcaaattagtcggttgcgcacttttgcttcgcgccataatagttttttttttaataaaagcttgctgtttatgtatgaagaattttgttgtagtattgcacctgatacttcactattgtttgagtttgctcaattagtacacacctattgagatttctccccctcacttttcataaaaaaagaggaaaaaaagaacagtttttggaagaatgtctcccactagcttttgagttgtagtcataacatgcatgaaactgcttacacagtcaattatttaaagctgtaaaatgtcttttcccacataaaacaaaacaaaactcttactgcatttactccttgtcttttccagtggtggcgacgcactccaccgcaagcgctggtctgcgtgccctctccggcgacaacgtggtagaaatccaagccatcctctgcgatgtccacaaggtggtctcctccggcttcgacttccgccgcgtcgtcgagtccgagcttcgcatccccgtcatctaccgtaagcacttaccattctctccctcgaatgatcgactataaactatacatgaggttttctctcatccgtgaagcaatatatatctcttgatatttgagatgtactttttcatgaacgaatttaaaaaagtaatgctaaaagttagaatggagttgaaaacttatctttgtaaatagtcttgaatttttatttcatttttaaggtataagtgtatgagttagttgggaggtagatacctccaccctgaaggaggtatatacctcataactaatactatgtggtatttatctatatacttccaagactcagaaatgcctagacattatcaattataaatttatcttctagtcagtttaatcaattcaatttttttatcactaaaacacaatagggaagtatgtaccttttaaaggatggaattaagaaaaacctcgtatatacatatatacacatatgtaatctttcgtttgatcgttgatgcttgcgtacgtgcacgtgtgtcatgcagttctgtcgaagatggaggaggaggacatggtcgccggcgaggacgcggagttcctgaaccacctcctgctgacggcgacctacatcgtcaggaagccgctcaaccccaccgtgatggcccggctgtggagggtggtggcatggcgcatgtactgcctggaagaaaggattcaggccaatgtcgctgccaatgctggcgctggtggcgaagacgacgacgacgacgacgacgtagttatcgtcgaggagccccaagtgcacttcaaggtggtgagaagaacgtccggtggcagcaggaagaggcagctgacaatcaacgtcgtcgacgacggcaaccgcggcagcggcagcggcggcggcggcggcggcggcgcaggttcttacccccagaaacaccacttacacttgcatgcatgcaatatatactgatctgaaattgatacagtagcttcctgcatacatggtccgtgtgacgtgtagtgtaggagaaaagaatccgatgcaattaattctttttgttttttctttactttcaactttgaaacagtattttatagacgtgaaattgcaaaaaaatatgaaaaaaaagtagtataaacagattgtgcattatcatttttaaatcatactgttagggaaagtttctatcaaataactaactaatactccctttgttttttaatatatgacgccgttgattttttcttacatgtttgaccattcgtcttactcaaaaattttatgcaaatgtataagatataaatcacatttaaagtagtatgagtgataaaacaactcataacaaaataaattataattacgtaaattttttgaataagacgaatggtcaaacatgtgagaaaaaatcaacggcgtcatctattaaaaaacggaggtagtatagtttttctccggcttatttttgatttatttcctttggtaacaacagatgccaacccaaccaggatactgcagcacatcactagcaacttacaggtgccaactctcttccatagtcgtttaatttgactgctagctttgctgttttcactaccttaatttcaaaagcatcaattttattttgtagtttactgttaatatttggatgtttcctctttatttttgttttcttgcatacgtactagtatacagtatgttgctagcaatcttggatgcttatctggccctccgatgcgatgctatctttaggctatagcatgtagcgctgcatcttcgataggattcttgttgtagagtccttcaggctgcttctacattccaaaatgcatataatcctttcattttaaatagttgtgacttgagtgttagtgctattttaattttgatccttaatcactttcaaagtataatattttgatgaatgaaatttatacgcggcatatataatttgattacatggtacaatttttttttataaattacatggtataatcttaactagatgtagttaaatctagtataaaaaactagttgcaaatctgtcgttaaaatagtagtcaaattaagtgtggatatgaataacatgtagtgacaattattttatactaatgtagtgactataagttatattttggactgggaatgaattgttaccaaaaaaattatgctactgaatatatcatgataattaattaagccctcttattgcaatagcataattaatgttttagacaaattatatggttttagagatgctgaacatttttatcataaaatttgatacctcactagcgagtaccacaaaaccgctctttaaaatactacatctgttccaaaatataataaattttaacaataaaactgcaaagttctttgtacctcaaacttatagccaaatgatatatttttgaatggaggtagtatgtattttctctgtacaatcatagatgcgtgcatacatatactacttatgtacatgacatgcctgaatttcttgctgctggtgccgtaggaattccgcacgaagcaccagaagaaggacatggccatcgagcgtcccctcatctcgtcggactccatgttcctcaaagccatcctcccgacgctcaaaatctcaccatgcaaccccctgaccctcactggcggcatcggttcaagcagtgtcgccgcggaggccttcgctggcggcagctcttcagctgcaccacttcaaattccagttttccagcagcaatccaccggcaatggcaacacggtgattagcttcagcaacaatgcttcaccgatggccatgcgtgcgccaaccgacaatactatgatatcgttcaacaatgtctctgctgcgccggtcgccaatgcggtgatctccttcagcaacatttctaggtctgctgccatgcaggcaccagcggcaagggggcaacatctgtccggtgatgtccagcagctggattttccccagcagaagctgtactttgggcccttctcctaccaagggcctccgccaccttccatgcacaaccacatcaacctactcccgccgacgtcctcccctgtgacctgctccatggacaaaggcaaggttcctattatcgagctcccatatgggatgcctgtggatgacttcctcgtcagtcaaaccacatatggcggtgccggaccatccatcggagccactgacgctgctgccgctgcgtacccttacacagatgcaccgagcaataacgttgcaactggctgtctcatggtgccaccaatggggccagcattcagtatcactgagccaactgtggtggcccaaggtgagggcaccggcaccggtgtcgacgccggcacatcagagaagaacgcgatagtagaagcaccaaacaaccccgcgccattaatggtactggatcaggttgctgctgatgctgcaatggatgttcaagaagacatcatgttctctttggaatctcttctggggccggactatgacctgctacctatggaagacgttagtgctccggacaccgctgcagccggtgatgcagctggtggctcactggacggagaggaaggcggcatggacattggttgggatctcgacctggatgacatcctggtggagaacgttaatgacttcgcgttcctggacaaccttgccgggagcgagtagtcagtagtcatctcatcgcaaatatattatctcaagttaattaagctagagattagagagaggggatgtgtgctcagtatgataaaacaacttttagtctttgttgcaagtactctaaacattgatgatttttcctccgttatcatgccaggaatgtgaacttttaaaactccaaattcctatattgcagatatgatattatgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0458600, RefSeq:Os08g0458600