Os08g0459100

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Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0459100| Description = Leucine-rich repeat, cysteine-containing containing protein| Version = NM_001068507.1 GI:115476751 GeneID:4345759| L...")
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Gene Name

Os08g0459100

Description

Leucine-rich repeat, cysteine-containing containing protein

Version

NM_001068507.1 GI:115476751 GeneID:4345759

Length

6516 bp

Definition

Oryza sativa Japonica Group Os08g0459100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22610373..22616888

Sequence Coding Region

22610573..22610665,22611239..22611397,22611830..22611905,22613227..22613388,22614073..22614506
,22614970..22616751

Expression

GEO Profiles:Os08g0459100

Genome Context

<gbrowseImage1> name=NC_008401:22610373..22616888 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22610373..22616888 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcgcctccgctcgggcgcggacaccgcgagtgcatccgcgggggtcacacttccaccgtcgccgtcgccgccgccgccgacggagatggcgggcgggtcgtcggcggggactccgtggccgtccccgtccaccgccctcaccctcggcctcggcctcggcccccccgccgccgacggatccctcaagtcccccggcctggcgccgccgcctcgccgcagcctgcgcctcgcctccggggcggtggcatccggcgtcgcgagcccgaccactaccccggcgtcgtccgctcctgctgcgggggccgatggcgcttcctccggctctggttccgcgtcgtccgggaggaggaaggggagggcacaagcgattcctgcccccgttgcttctccgaccagcgctggtgagtttgggggcggcggcgaagttagggtttggggcggcggtaatcgtagtggtgaagcggcattcataagcttgcaatcggggtctagggttgcgaaacggtcgatggagcttggtgttcaaatgggtggggagatgggtctcggatcgaatggaggtggcggggctggaggccaggtgcatgatgaaatgccacaccggaatgtggatagttcggggaagcgtcgtaagatagggatggagatcccatacgtctctgattcagagagtgacaatgatgatgactgcatacttccaggggaggatggcagtaggatgccggtacagttatgcgctgcttctgatttgattgaactgaatctgttcaccatgagcatgggcaggacagatgaagggagaatgggtgattctgtgaagacaggtaaaaagaaagctagtggagttactattcgagaaaatgacatccccattgacgagcatgtgcacggacagagttcggcaattggtgagagtattgagctattagcatctcctatgcgaagtgcattaggcgaaaaccatgcaggtatgtattccacagaagaggagagaaggcagaaggctaggtatgatgttaaaggcaaagggaagctgtatttggggaacgatgattctggtgctggtaccgggattggtaagtttagtcccgatagtaaaggaaaggctaagatggttgtggaagagagttcattgtctgttagctcaggtgcggatcaaatggatttgaactcagtgatttctgaagaggtgcagagtttcccagcagatcattgggaaccacgtcggagagaaagggcaagacagagagctattgaaatggctcctaggtttgcattcttcaaagcagatgaagatggacatagtgatgatggtgatgatgatgatgacaatgcagaagagttggaaccggttcctgatcctcaggactggccaggtccattttcaactgcaatgaggatcattactgacagagaagctaaactgagagctcgggagttgaattcttccaacttgaacaagtctgctaataaggtcatttcgtggataccttccaaagataggaaatctccactgcgatctgctccatcgcttactagcttgtgcttgcaaactctttcaaataatgctgaagctatcgaatcacttgctggcattccagatgagctaaaaaatagactcttatctagtctatgccattctagaaagatgaatgtccatcttcttggtgaactcatgtgtgataatcctgtgacagtgcaactcagtgagtgttcatggttgagtgaggatgactttgagaccatttttgggaaatgcaggacagaaatcttgcaggttttgcagcttgacttatctgggcgatgcatgcctgactacatgttgcctgctaccttagcaaaggttcctaacagcatgccattattgaaaaaaatatctctgaagggaaattaccgtctttctgatagtgggttagacacaataatctctgcagccccttctctgagttcgctaaatttgtgcgagtgttctcttctcacttcaactggaatcgagaatcttgctaacaagttgagtttagtccttacggaactatatattgatgactgcttaaacgtggatgccatgatgattcttccttccttacaaaagattaagcatttagaggttttatcaatgtctggcatacaatctgtcagcaataagtttgtcaatgagcttattcctgtacacggttcaaatctgaaggagttggcatttgctggttgcttgcaactgacatcatcttccattaagactattgcggggaactgcccacaattatcttcattggaccttcgcaacctgaatagattgcgggattcagcaatgagacatcttcgcaatggttgccggcttataaaaaaaataaagctccaaaggaatacattcagtgatgaagctgtgtatcggttcttggaacagtctggaggatacctaactgagttatgcctgaacaatgttgagaaggctggaaatcttactgcttatgcaattgctcgcaactgttcaacgcacttggaggttctggatctttccttttgccgtgaactgaccaatgaagcgttggggctgattgtcgacagctgctcatcattgagaattctcaagctatttgggtgtacccagatcacagatgttttcctgaaaggccactcaaattcgctggttacaattgttgggatagaagggaatatactgaagcaaacggggagtctttag</cdnaseq>

Protein Sequence

<aaseq>MPRLRSGADTASASAGVTLPPSPSPPPPTEMAGGSSAGTPWPSP STALTLGLGLGPPAADGSLKSPGLAPPPRRSLRLASGAVASGVASPTTTPASSAPAAG ADGASSGSGSASSGRRKGRAQAIPAPVASPTSAGEFGGGGEVRVWGGGNRSGEAAFIS LQSGSRVAKRSMELGVQMGGEMGLGSNGGGGAGGQVHDEMPHRNVDSSGKRRKIGMEI PYVSDSESDNDDDCILPGEDGSRMPVQLCAASDLIELNLFTMSMGRTDEGRMGDSVKT GKKKASGVTIRENDIPIDEHVHGQSSAIGESIELLASPMRSALGENHAGMYSTEEERR QKARYDVKGKGKLYLGNDDSGAGTGIGKFSPDSKGKAKMVVEESSLSVSSGADQMDLN SVISEEVQSFPADHWEPRRRERARQRAIEMAPRFAFFKADEDGHSDDGDDDDDNAEEL EPVPDPQDWPGPFSTAMRIITDREAKLRARELNSSNLNKSANKVISWIPSKDRKSPLR SAPSLTSLCLQTLSNNAEAIESLAGIPDELKNRLLSSLCHSRKMNVHLLGELMCDNPV TVQLSECSWLSEDDFETIFGKCRTEILQVLQLDLSGRCMPDYMLPATLAKVPNSMPLL KKISLKGNYRLSDSGLDTIISAAPSLSSLNLCECSLLTSTGIENLANKLSLVLTELYI DDCLNVDAMMILPSLQKIKHLEVLSMSGIQSVSNKFVNELIPVHGSNLKELAFAGCLQ LTSSSIKTIAGNCPQLSSLDLRNLNRLRDSAMRHLRNGCRLIKKIKLQRNTFSDEAVY RFLEQSGGYLTELCLNNVEKAGNLTAYAIARNCSTHLEVLDLSFCRELTNEALGLIVD SCSSLRILKLFGCTQITDVFLKGHSNSLVTIVGIEGNILKQTGSL</aaseq>

Gene Sequence

<dnaseqindica>6224..6316#5492..5650#4984..5059#3501..3662#2383..2816#138..1919#gcgctctccccctcgcccgcgcgggaaaaccataaaaaactgcgccgccgcccaaaccgcctcctcctccttcccccgcaagcctctcccccttccccccccctctctcccgccgccctcgcgctcctccatcgccgatgcctcgcctccgctcgggcgcggacaccgcgagtgcatccgcgggggtcacacttccaccgtcgccgtcgccgccgccgccgacggagatggcgggcgggtcgtcggcggggactccgtggccgtccccgtccaccgccctcaccctcggcctcggcctcggcccccccgccgccgacggatccctcaagtcccccggcctggcgccgccgcctcgccgcagcctgcgcctcgcctccggggcggtggcatccggcgtcgcgagcccgaccactaccccggcgtcgtccgctcctgctgcgggggccgatggcgcttcctccggctctggttccgcgtcgtccgggaggaggaaggggagggcacaagcgattcctgcccccgttgcttctccgaccagcgctggtgagtttgggggcggcggcgaagttagggtttggggcggcggtaatcgtagtggtgaagcggcattcataagcttgcaatcggggtctagggttgcgaaacggtcgatggagcttggtgttcaaatgggtggggagatgggtctcggatcgaatggaggtggcggggctggaggccaggtgcatgatgaaatgccacaccggaatgtggatagttcggggaagcgtcgtaagatagggatggagatcccatacgtctctgattcagagagtgacaatgatgatgactgcatacttccaggggaggatggcagtaggatgccggtacagttatgcgctgcttctgatttgattgaactgaatctgttcaccatgagcatgggcaggacagatgaagggagaatgggtgattctgtgaagacaggtaaaaagaaagctagtggagttactattcgagaaaatgacatccccattgacgagcatgtgcacggacagagttcggcaattggtgagagtattgagctattagcatctcctatgcgaagtgcattaggcgaaaaccatgcaggtatgtattccacagaagaggagagaaggcagaaggctaggtatgatgttaaaggcaaagggaagctgtatttggggaacgatgattctggtgctggtaccgggattggtaagtttagtcccgatagtaaaggaaaggctaagatggttgtggaagagagttcattgtctgttagctcaggtgcggatcaaatggatttgaactcagtgatttctgaagaggtgcagagtttcccagcagatcattgggaaccacgtcggagagaaagggcaagacagagagctattgaaatggctcctaggtttgcattcttcaaagcagatgaagatggacatagtgatgatggtgatgatgatgatgacaatgcagaagagttggaaccggttcctgatcctcaggactggccaggtccattttcaactgcaatgaggatcattactgacagagaagctaaactgagagctcgggagttgaattcttccaacttgaacaagtctgctaataaggtcatttcgtggataccttccaaagataggaaatctccactgcgatctgctccatcgcttactagcttgtgcttgcaaactctttcaaataatgctgaagctatcgaatcacttgctggcattccagatgagctaaaaaatagactcttatctagtctatgccattctagaaagatgaatgtccatcttcttggtgaactcatgtgtgataatcctgtgacagtgcaactcagtgagtgttcatggttgagtgaggatgactttgagaccatttttgggaaatgcaggacagaaatcttgcaggtaatattttttttactctttatagctaaatgccgtgcgctgatatgaattaaaaacgaattacatgttgtaatttttgtaaaaaaattgtgagctatttcattgaacacacccttaatatttttgttacagggagcacatgacaattttacattctaatagtaaagttatcatttatcctacatatatatgtgaaaattttgttaccatagattattccgtgattaactagaattttagaggttgaataagatattaaaacatgtagaagcaccatttcgtccatgtgccatgtctcgatttgtcgttgaaaaacaagttgttaaatttgtcggttttagattatgaccataacagtgtttgggtcttagggttgatcactgatattttgttaactttgcggccttcttatttaagtcacctattgaggactcattttccctcccttttgctcttactgaaggttttgcagcttgacttatctgggcgatgcatgcctgactacatgttgcctgctaccttagcaaaggttcctaacagcatgccattattgaaaaaaatatctctgaagggaaattaccgtctttctgatagtgggttagacacaataatctctgcagccccttctctgagttcgctaaatttgtgcgagtgttctcttctcacttcaactggaatcgagaatcttgctaacaagttgagtttagtccttacggaactatatattgatgactgcttaaacgtggatgccatgatgattcttccttccttacaaaagattaagcatttagaggttttatcaatgtctggcatacaatctgtcagcaataagtttgtcaatgagcttattcctgtacacggttcaaatctgaaggagttggcatttgctggttgcttgtaagtcttcatggcattctacttaattatgaggaatatcttctttattgtattattactttatcagcactagttttaggttacaactttcatctcccaaactacaccatgaatcaggtgcatacaaaacaaattttccatataaagcataagtccagagctgattctaatgtaactagaaggtctacaatagagaaacaacagtaataagacaattatttacctcaatatcagtacatgacagctgtcctatgtgttaatacagcaccaatttccatcagtaaaggggctagggaaatgcttatccatcaatatagggccagcattttaaatgtggatctgtaactttttatctgatgagagtcctgaccaaaatgaaactataacatgatattgcaggctgccaatagctttggtaccttcttgaaagccttttgacatcaatcccttaaatatttatttaataattgtattcactggggcactggccttattgttgttatttaagtgtcacatttgagagcatattgttaataagttattctctatatactataggccctgtttgtcacaatcatctgataccataaatgtttatactcataatatgacatattatgcaggtatagatacatgatttagggtgtaattctgactacctacgtttgtgtcatctatatgtaggcaactgacatcatcttccattaagactattgcggggaactgcccacaattatcttcattggaccttcgcaacctgaatagattgcgggattcagcaatgagacatcttcgcaatggttgccggcttataaaaaaaataaagctccaaaggaatacattcaggtatttctcttctgatgctgtttggagtgtttttattctttagcaggataattttgttagtatgtacatccatggctttattttttttagataatgatcattgaatgagttttatcttttcgactagtgttctacttatcatcttttcaataagaatttatttcttggtatagggtgtcttttcagtttctctatgtaaaaaaaggtttttaaccttgtgaaaagaagctgaatttatctcccttattttgcacacaattacatatcctgattatactgcttgtgaaaggaacccacactttcctttgttggctgggactgggagtctagctgtctaggacaacctgcttgttgggttgcttctgaccatactccccaattatgatgttcatgtatctgtttgtttttaccttgtaattccttttctttctgttaccaattttcaaatgaatttctcctctgtactgtaaagtcctatagccttatacgcttttctgcctgattttacttacagtttgagacaattaataacatagttgatgtgatgcggattacttcattcttaattataatgctgtcaagattctatgtcctactgtaaactcattatttattggaaattctggtaggatgtgatatttgtaatcatggtattggggtcattgtgttttgtttgttagaattgagctgctacttttttttcttttgtagattaaggaaacattgaaattactatcttgtcacaaaaagttgttttgtacttttcaaagtcaacaatagataactttgacggtttgaccacctatttcttttgcataaataaaaaaagttttacaggtataatattatgaaaacttttgttaacacaaacttagccacttcatttccatatgcccataacctgcattgtaaacaataattatggcaaaagttaacttgttgactgcacacatgctaaaacaacattcttttctgattggagggagtatagaatacaaagttcagtctcaaagaatctccttggtttttagaccagcaggaatggatccctccttagcaatctatagttctatacaagagatggtcaaaatcatatggtaatatccacatgtttttacaattccatagtatttgccgtgtcagcctaacatatcaacacaggtcaacactgatggatattttggacctttatttcattttagcgtgactcttcattaatacttggtactcttttgtattgatgaagatgacacatgatttttgtgtaatgaggtcgtgcaaagttgtttctgagctgtaatcatgttgattgtaattgcagtgatgaagctgtgtatcggttcttggaacagtctggaggatacctaactgagttatgcctgaacaatgttgagaaggtactctgcccattgttccatttctctgcttggatgtgtgtgtgcctgtctctgcgttgtgttgattggaattaggacattgtatgggttcttttcatgcatttcttgggatatgatggtatacttgaattgactcattgaattgctgtactgcaaaactaattgctgagtcactgatgtttaactgctgatgtataatcatttattccctggctgttagcacataattgttgacttctaatttcttatttattcattttaaatactgttgcggcgttgcccttgcctccatttcctatgcatttgtttgcttcatgtaaacctgtaccattgggtagtttttcctgctttcttggactgttgtatgatgccttataagtcttgcacatatatatcttatgcttataataatatctactgcttttactttaggctggaaatcttactgcttatgcaattgctcgcaactgttcaacgcacttggaggttctggatctttccttttgccgtgaactgaccaatgaagcgttggggctgattgtcgacagctgctcatcattgagaattctcaagctatttgggtgtacccaggtatgataacttattcacatattaagtactagggcgttagtatattcttgaaacaaaatgtcaggcgctctgcctattcaatgaagtagagagcagaaaaacagtagtttttttagaagaacaagagcaagcagaaactactgctgtacttgtactagtaccacacgctatagtggctgctcattgagcccatctagtggatagccaaatacgctacctctcttagattcaaaccttgctggatgaaataacctacttggggtccacttttgtggttcgtttggagaagtcctattgcactcctttgcgtcataatgtttttctgctatcctttagtcttgtgcatacctaccaggatttttctttcctgggccactactaggatgttagtataaaggctcagtttttttttggttcatgttctatgctcgatcttctactgccagcagttatgcagaaagaaacaaacctcacttaggagctcgtatggttcatagttgactaggtagtgtcatgagccatcaatttcacatttatttttatctaacttgatctgttcatgttgctttccagatcacagatgttttcctgaaaggccactcaaattcgctggttacaattgttgggatagaagggaatatactgaagcaaacggggagtctttagttcccatgataacctacattaaactagccattcagcttagtcatgatgtcgaagcccctgaaggtggctgtagcttctggcagggaatatttttgcaagcctaccctgctctctgctgatatcaattagatgatcctatagaggattagcattcgagtgtttaacattcgttcatgttatgaaaaatccaacgttacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0459100, RefSeq:Os08g0459100