Os08g0460900

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Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0460900| Description = Cyclin-like F-box domain containing protein| Version = NM_001068514.1 GI:115476765 GeneID:4345766| Length = 3930 bp|...")
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Gene Name

Os08g0460900

Description

Cyclin-like F-box domain containing protein

Version

NM_001068514.1 GI:115476765 GeneID:4345766

Length

3930 bp

Definition

Oryza sativa Japonica Group Os08g0460900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22722394..22726323

Sequence Coding Region

22722394..22722573,22722893..22722973,22723074..22723350,22724698..22725002,22725082..22725234
,22725565..22726323

Expression

GEO Profiles:Os08g0460900

Genome Context

<gbrowseImage1> name=NC_008401:22722394..22726323 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22722394..22726323 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcgctgggctcgctccccctcgacgtcctcgacaacatcctctcccgcctccacatccacgacgtggtccgcacctccgcgctgtcccgagcgtggcgccgccgctgggagtcgctccccaccgtcggcctcctcaacagccccggcatcggcgcctccgacgtggacgccctgctcctccgccgcaccgcgcccgtccgctccttccgcctcgccacgcgcgaccgctcctggtcccccaccgccttccacgactggctcctccacctccacctccgcggcggcctccgggacctggagctgaccctccggtacgagttcatgtaccagaagctcaactcctgcctcttctccttccgcgagctcacctccctcaagctctactgctgcggtctccccaacttgcccgctgagttcgccgggttcccgaatctgaagacgctgcacttctctatggtccaagctcagagtcccgggggaagggggatagccaccctgattgccgcatcgccggtgctccaggaggcgagtctcatcgacggaaagctcatcggagatggacccgacgaagattgggtgattcgggggtccaatctccggaaactgaccatagctcttggccataaatatggtggacggatcgaagacatcgcacggctggaggaatgttgtctctttggcccaaattacgccaaatacttgatgcggatggcgcatgtcaccaagctcagcttctactgcaattccattttgtcaactgaagttgacgtgctggagcgattgccattcctgtttgagaaccttaggagcttagtccttggagtgaatttttgtattttatctcacattttggctactttttgcctacttagaagtgcgccagttcttgaagaactcgatgtttgggtatttagtgatgggacccaggaaatgaaaacagatgatgagttcttcgatgctcagtgggtcaatcatatgtttgccaaacttcatgttgtgcgcatgaagaaggtttcttgcctctgtaatgaaatgcttcttatagagttcattctgtccaaggcaagagcactacgagtgctgtccctcactcttgcatccaattcccagttcagtatcgaggaagcaattactgatataactgaatatccgagagcctcaccttatgcgcaggtcatcttcgcgggtagagaaccagaatgtgcaaatgatgaatggaatggtttcgttgatttatccgccgagttgtctgacttggaggacatacagacatcaggcagaagatcactcgatactgttaaccctcggagaaggcagcggttgaatggggagtctgtagctcagctgcaacagcttgaggagcagctgttagagttggaaaaggaggaggaagagcaccacatgcgtaggatgcaagcattgaatgagatggaccaggagagtgaaaatgtctttagacatcaagagtacatcatatctacaattgagtttctgtctaaacaatgcaaccttcaccaatttagccttcccccatggccaggacggccatcaatgctgtcatctcatacggctaccaccggaccaggagacactccagttgatcctgttgataatgccgatgtacatgtggattctcaagaagaccatgccactcttgatgctgctgatgctcatgttggttctccaacaaagaatgttgccaatggtgctccgaatggttttgcggattctccagaaggccatatctga</cdnaseq>

Protein Sequence

<aaseq>MDALGSLPLDVLDNILSRLHIHDVVRTSALSRAWRRRWESLPTV GLLNSPGIGASDVDALLLRRTAPVRSFRLATRDRSWSPTAFHDWLLHLHLRGGLRDLE LTLRYEFMYQKLNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLHFSMVQAQSP GGRGIATLIAASPVLQEASLIDGKLIGDGPDEDWVIRGSNLRKLTIALGHKYGGRIED IARLEECCLFGPNYAKYLMRMAHVTKLSFYCNSILSTEVDVLERLPFLFENLRSLVLG VNFCILSHILATFCLLRSAPVLEELDVWVFSDGTQEMKTDDEFFDAQWVNHMFAKLHV VRMKKVSCLCNEMLLIEFILSKARALRVLSLTLASNSQFSIEEAITDITEYPRASPYA QVIFAGREPECANDEWNGFVDLSAELSDLEDIQTSGRRSLDTVNPRRRQRLNGESVAQ LQQLEEQLLELEKEEEEHHMRRMQALNEMDQESENVFRHQEYIISTIEFLSKQCNLHQ FSLPPWPGRPSMLSSHTATTGPGDTPVDPVDNADVHVDSQEDHATLDAADAHVGSPTK NVANGAPNGFADSPEGHI</aaseq>

Gene Sequence

<dnaseqindica>3751..3930#3351..3431#2974..3250#1322..1626#1090..1242#1..759#atggacgcgctgggctcgctccccctcgacgtcctcgacaacatcctctcccgcctccacatccacgacgtggtccgcacctccgcgctgtcccgagcgtggcgccgccgctgggagtcgctccccaccgtcggcctcctcaacagccccggcatcggcgcctccgacgtggacgccctgctcctccgccgcaccgcgcccgtccgctccttccgcctcgccacgcgcgaccgctcctggtcccccaccgccttccacgactggctcctccacctccacctccgcggcggcctccgggacctggagctgaccctccggtacgagttcatgtaccagaagctcaactcctgcctcttctccttccgcgagctcacctccctcaagctctactgctgcggtctccccaacttgcccgctgagttcgccgggttcccgaatctgaagacgctgcacttctctatggtccaagctcagagtcccgggggaagggggatagccaccctgattgccgcatcgccggtgctccaggaggcgagtctcatcgacggaaagctcatcggagatggacccgacgaagattgggtgattcgggggtccaatctccggaaactgaccatagctcttggccataaatatggtggacggatcgaagacatcgcacggctggaggaatgttgtctctttggcccaaattacgccaaatacttgatgcggatggcgcatgtcaccaagctcagcttctactgcaattccattttggtaacccatctggtttatttcattgttgcatcaattttgattcatatctgttattacagatcttttttttttaccccaattttcaaggattgattgaagggaagacagtgtagttagcctgacagatgttttgttatctaaagtgttgattggaagtttggaactcttatggcatgttttactttttataaagtgctccattagttagtaataaaaaacaagttagtgaaatagacagtattattatagaaactgataatttattgtcactttttttatattgaatattgataccatgttttgacactaatttactgattttttttccagtcaactgaagttgacgtgctggagcgattgccattcctgtttgagaaccttaggagcttagtccttggagtgaatttttgtattttatctcacattttggctactttttgcctacttagaagtgcgccagttcttgaagaactcgatgtttgggtaaatgctgaattcacaagctcctttttcctttattttgtttcaagatgatgacaattccttttgtgtttccctacaggtatttagtgatgggacccaggaaatgaaaacagatgatgagttcttcgatgctcagtgggtcaatcatatgtttgccaaacttcatgttgtgcgcatgaagaaggtttcttgcctctgtaatgaaatgcttcttatagagttcattctgtccaaggcaagagcactacgagtgctgtccctcactcttgcatccaattcccagttcagtatcgaggaagcaattactgatataactgaatatccgagagcctcaccttatgcgcaggtcatcttcgcgggtagagaaccagaatgtgcaaatgagtaagcattgtgattctgatatttccttgccgtgctgttccatacattcttgaattttctcagatgttcttttctacacttgtgccttaaaaattccttccagtttactcttttctgaacaccctatgtgcatttagtattcggtgcggtttatattgtctataaggtaaattgcattataaatcccttaacttgcatgtgtgcaacattctagggtaaactctcgtctcactaatcccgtttcactaaaaaacccttagaatccacccctggcaacagattgctgatgcggtgtctggttggttttgaacttggagcatgggtctagcagatagtacatgtgccccaatgagcgtgatgttatcctttaattaattactatttggtagcttgttttgttatgaacatctgttagagactgttttgttatggacatctgttagagaccgtttaatttacctatttgagctgttacctcctagggatggcaacaggggcatctccggtgggtgatgagcccctgtccccacccctggacagctccaaatctcctgtccctcttccccatccctggcgttactgctgtctctgcccgtctctgcccctgccaggctatagggtctcgagaggtatatgcactgggcaaaacaaccacattgctcactgttgggacttgggagtagagcaaagaaataaaaaagggaaaaccaatttcaaccaacaagaactttggccccatcccggtcccctagtaggggaatttctcagcggggaacaggggacggggtccaatgccatccctagggttggcctatatagaggcagcagcatgcattggagattaaacaagaataaagaagtccctctctgccttcaatccttcacaattagtctctcttctacagtgtttatatccatgaatccaatattcataatagtagtgttaattgctaactgcaagagagatgaaacggagtttcaactctcgagagttatgggacatctcacacttgcacgtggtgaaattcaatcttgcctataagatcaacatgatatatctacattaaattctgtatgaatttgcaaacatgtgatgtactatcttgttcagagcttacaatattcaaaataaactcaccattttaaacactatatgttggacaaatatttgtgagtttctttattctttgaaatgtctacttttcctcaaaattttttctctagaattatgactcgtgagataaagcttgtgatacttgagaaagctacctgttgttgatatgctactactgctatgcaaaatatatatttttagcacaaatccagtaagttgttttttttactcagtgaatggaatggtttcgttgatttatccgccgagttgtctgacttggaggacatacagacatcaggcagaagatcactcgatactgttaaccctcggagaaggcagcggttgaatggggagtctgtagctcagctgcaacagcttgaggagcagctgttagagttggaaaaggaggaggaagagcaccacatgcgtaggatgcaagcattgaatgagatggaccaggagagtgaaaatgtctttagacatcaagagtacatcatatctacaattgaggtatcattgtcctagcataacaactctttaattttttccccaaaaagaaccaatagttgtatgtatgtatgaatgaatttgctggctgatggaaatgcagtttctgtctaaacaatgcaaccttcaccaatttagccttcccccatggccaggacggccatcaatgctgtcatctcatacggtaagtaatgctcccggggttctgatattactccctccgttttatattacaagttgtttgacttttttccttagtcaaacttttttaagtttgtagaaaaatataataacattttcaatacaaaacaaacatattatcaaaatatattcaatgctaaatttaataaaactaatttagtgttgtagatgttgctaatttcttctataaacttggtcaaatctaaaaaaaccttaactaagtaaaaaaatcaaatgacttataatatgaaacggagggagtaatttggaatacggtcttatatacttctttgatggtaaaggctaccaccggaccaggagacactccagttgatcctgttgataatgccgatgtacatgtggattctcaagaagaccatgccactcttgatgctgctgatgctcatgttggttctccaacaaagaatgttgccaatggtgctccgaatggttttgcggattctccagaaggccatatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0460900, RefSeq:Os08g0460900