Os08g0461100

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Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0461100| Description = Leucine-rich repeat 2 containing protein| Version = NM_001188682.1 GI:297726494 GeneID:9270368| Length = 7451 bp| D...")
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Gene Name

Os08g0461100

Description

Leucine-rich repeat 2 containing protein

Version

NM_001188682.1 GI:297726494 GeneID:9270368

Length

7451 bp

Definition

Oryza sativa Japonica Group Os08g0461100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22735372..22742822

Sequence Coding Region

22735372..22735515,22735596..22735670,22735743..22736004,22737533..22737825,22737856..22738059
,22738463..22739295,22739978..22740101,22742115..22742171,22742799..22742822

Expression

GEO Profiles:Os08g0461100

Genome Context

<gbrowseImage1> name=NC_008401:22735372..22742822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22735372..22742822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggtcccccaaaggagaagggcactgagaggctgattctgatccgtgggaagaagcagacccaacaatttgatttgcctcccaccgtcggcctcctcctcttttttccccaccgtcgagctccccaccacgccggcgaggaggcgggtggcggcggcggcggcgtgtccaacccgcttccacgtcccgcagccgcggcaggtttccaagcgagcaatggccgcctcgccgcccaaccgggagcggcggctcgcagcggcggagccggagccgccgccgccggacggtctgggtgcgctccccgtagaggtcctcgacaacatcctcggccgcctccacatctacgaggtggtccgcacctcgtcgctctcccgcgcgtggcggcgccgctgggagtcgctctccacctcgacctgacccgcagccccggcgtcgcggcgtccgacgtcgacgcggtcctcctccggcgctccgccgccgcccccgtccgcgccttccgcctcgtcgcgcgtgacccctcctggttcgtcgacgccctccacgactggctcctccacctctcccgcaacggcgtccaggccctggagctgtggttcccgacctacaacttccagctccattcctgcctcttctcctgccgcgagctcgcctgcctcgacctcgacagctgccgcctcccgcccgcacgcatggggtttgagggattcccgaacctgaagaagctacgcctccatgaagttaccctcccggagcacatgggaaatatgttggctgccttgatttccgcgtcgccattgctggaggaggtggagcttgtaagtgtgtttcttgtcggcgactaccctgacgaggagtgggtgattcgtgcgcccaatctccggaagcttataatggttgctgcgtttccttatggtggccgagtggaggagcttccacgactggagcaagggattctgtgcggccccaactacgccaagttcttgacggggatggctcatgtgaccaagctagagttcatgtgccactatatgttgtcaactgaagttgatgtgctggagcagctaccgttcttgtttgagaatcttaggagcttagtcattagtgttaatttctgtaaaatgtcccacattttatttatgttctgtctacttagaagtgctcctgttcttgaagaacttgatgttgtggtaatgttaaatgatcacttgcaaattcattatgccattacttgtttcaagggacaaagcaatgatgctcaggatattgatgcgaatgatgagttcttgaatgctcagccaacctatgatatgtttgcgaaacttcgtgttgtgcgaatgaagaaggttgcttgcctctgtaatgagatgcactttatggagtttgttctaaacaaagcaagagtactgcgagtgctatctgtttatccttcttctggcgtcacttgtagtaatgagcaggcttttataacagaacatccgagagtttcacctgatgcacaagtcatcttcatgaatagagaatctgcaaacaatggttacatggacactcccagtgttaattataagttggaaacaacaagaacaggcaactggatagatcttgcacatccttgcaaaattaatcggttggatctagatgccgtggatcagcataaacatattgaggagatgttgctaatacggcaaaagttactgaaagaacgcaaggagatggcacaggctcttcatgaagataagaagcttttgctaaactacttcgctgcagttaaaaaatacttcacttctaacctaaagtatctgtctgagcaattgaacatttccattccaccatttcctgagccttcgtcagtctcatcatcttcccatcctacctcgcccaggttggcagaagctcttaccgatcctgccagtcgtagtgctgacaatgtgcaagcagattctcgagctgaccaggtagccattggtgcttccagtgctcgtgccaattctcctaaacctgaagacaatgtctga</cdnaseq>

Protein Sequence

<aaseq>MAGPPKEKGTERLILIRGKKQTQQFDLPPTVGLLLFFPHRRAPH HAGEEAGGGGGGVSNPLPRPAAAAGFQASNGRLAAQPGAAARSGGAGAAAAGRSGCAP RRGPRQHPRPPPHLRGGPHLVALPRVAAPLGVALHLDLTRSPGVAASDVDAVLLRRSA AAPVRAFRLVARDPSWFVDALHDWLLHLSRNGVQALELWFPTYNFQLHSCLFSCRELA CLDLDSCRLPPARMGFEGFPNLKKLRLHEVTLPEHMGNMLAALISASPLLEEVELVSV FLVGDYPDEEWVIRAPNLRKLIMVAAFPYGGRVEELPRLEQGILCGPNYAKFLTGMAH VTKLEFMCHYMLSTEVDVLEQLPFLFENLRSLVISVNFCKMSHILFMFCLLRSAPVLE ELDVVVMLNDHLQIHYAITCFKGQSNDAQDIDANDEFLNAQPTYDMFAKLRVVRMKKV ACLCNEMHFMEFVLNKARVLRVLSVYPSSGVTCSNEQAFITEHPRVSPDAQVIFMNRE SANNGYMDTPSVNYKLETTRTGNWIDLAHPCKINRLDLDAVDQHKHIEEMLLIRQKLL KERKEMAQALHEDKKLLLNYFAAVKKYFTSNLKYLSEQLNISIPPFPEPSSVSSSSHP TSPRLAEALTDPASRSADNVQADSRADQVAIGASSARANSPKPEDNV</aaseq>

Gene Sequence

<dnaseqindica>7308..7451#7153..7227#6819..7080#4998..5290#4764..4967#3528..4360#2722..2845#652..708#1..24#atggctggtcccccaaaggagaaggtgcggcatttttacccctcccttttagcttggctttggcttttttctgcccctcagggcgcttctctttgcggctggtctcctcctccgtgtcttgattggatgatgatgtgtatgcacctgtttcagagatcttagtcctcttattcttactatcttcttctaagacccttcgccattttggttgatctttcagttccctccacatgtattccaatgtgaaaggtttttcattgttttctgacttaaaaataatatgagccttttccatgatcatatcatcagagtatccactcctaaaggttcttctaactcgagaataagctccacaaaatttcccaatttccttcttaacaccaccccaatgtgtcttgcattgcacggctatccttttgcggttacttctagatgtattgctgttaaactctgcagcaacagccttccaatagtattctgacttctgatcattaccttttatgggatccactgaattattcagccaagagctaaggagtcttatgttttcctctttagtccagttgactcttgtccctctcctccctgcctcttcactgttgtcacttgactcttcgatattaaccacattgttctcttcgtgtcttgcagggcactgagaggctgattctgatccgtgggaagaagcagacccaacaatttgatttggtgagtacacacaattttccggaggacgaaaaccttgaaaactcattggtgtagattgtaaccaatgtgcttgctgctgaaaaccgttgaagcttggagtagaattgccatatggttgatagttggtaggagccccaaaaggatggaagttctgaaaagtgggtgttgagaattgagaaaactgtgtttgagggaatattgaggggaattgtggagaagtggagttttggctaccatttccagaagcttggctttgggagccttggctaagcatgtgcataaaacctctgttgggggggatccatcttgtttgatgaaatacagaaaaaatgacttgagttgtgtttgtatttgtagaggatgaggttgcagcattgctgcaacaagttgcaacggctacaaatgtataacggctataactgctactctattattttagtgcaactgttagaaatcactgtgcacatgctatattttatttctctactgccggcagtagcgctactgcctggatgttgctattatctacccccacaatggctactacctatttggatgggtgcatttattgcttattacctgttttttgagcacattgtggataccctaacacaacagtacaattgattggtggggttcactcctaactctagaaagcaggaaccacttgtcattcacccaacaggaatacaacaaaggattgttgagaaattccgtatgatttaaattatagagtatagtttaccctttggctctcatgtagatgtagtgctttgtatggttcaaacgtatgaagaatttggaaaaaaaacttaccataagattccaccatatatgaaaaatatttcccatgtcttcttctcaaattcctaagcttttgtatgtgttctctgtccttcgtacacggtaagattgcaaaatcatctattttacaagtggaaaaagtccactttgactcccttaaatatcggccgaatctaattcgtatccctaaaccgcaaaaccagataggacgactcctccaactattgaaaccagtgcaatttgactccctcaacggttttgaaagcggttttggctgacgtggcgcttaagtagcggtgttgacctggccttcatcccacgtgtcgcttacgtggcattagaataaaaacaaaaaccaaaaatttgtaggaccaacatgtcattcaaacaaaaaggtgggacccaccgacatgtgggccccacatgtcaaccaccctctccttcccttcttcctcctccctccctctctctctcccttatatatctctctcccccggcctctctcttcaccttggccagcggcggctgtggagacggcggtggtcgatagcggcggaggtggggaacgacggcgacggcgaggaggtgggcggcagcgtgtccagtccgcttccgcgtcccggcttcggcagcggggtggggcagtcctccctaggcgtcgctcgtgtcagcatcgtctcgatccacagcgagacgagcagcgtcgggacgcggatgccgaggcggtccaaggcgaaagacaccgggtcggtgctgacgatgtcgtcgggggaaggggcgccggtaaccagggcggggatgtggtcgaagaagccgccgcacgcgtgaaccgcgtccacgccgtcgcgccaccactgtcgccgtttctgtgcttctctcctttccttctcctcgaagctatcggcatcatcaagcaaaacgccacccggagcaattcctcattggctcattgtgccactctccccctactaccgccagccgcctctttccccttgacgagcgtgccacccttcgggctccccaccgtctctgctaccccaaagagctgccgccctcgctggcttcgggaggccatcggagctcccctgcctccccatcccggacgagaccgtcgccatgctcgtctaccccaccgccggacgagcgcctccactagcctccccgcagtcttgcggcgaccaacttcccgtgcagcatcttcccccacagcctcccaccgtcggcctcctcctcttttttccccaccgtcgagctccccaccacgccggcgaggaggcgggtggcggcggcggcggcgtgtccaacccgcttccacgtcccgcagccgcggcaggttcggcaacgtggcggggcagtcctccctcggtgccgcccgcgttagcatcgtctcgatccacagcgagacgagcagcatcgggatgcggacggcgaggcggtggagagggcgctgggtgtggacaaggcgctcgggtggagcaccggccgtccgctccaactaccacccggaatcgccgcccctgccgccgattgtgccaagagagaaggtgaagagaaagggggagagaaagagagagaagggagagagaggaaggaagaagaagatagagaggatgacatgtgggccccacatgtcagtggggcccacaattttttaatgtgcgaatcacggatgggtcccacagatatttttttaattcagtgccacataagcgccacgtgagatgaagactaggtcaacatcgccacatcagcgtcacgtcagcaaaaccgccctctaaaaccattgagaaagtcaaattgcactagtttcaatattttggggagtcgtcttatctgatttgtggtttaggaatacgaattagattcgacgtatatttaagggagttaaagtggactttttcctttacaagttggcccaggcccaggcccaattcctttcgccgcttgctcttctaggctctatagctagagagatttcgttaggttcccgagcgcgcgaatttgggaaattctaggtttccaagcgagcaatggccgcctcgccgcccaaccgggagcggcggctcgcagcggcggagccggagccgccgccgccggacggtctgggtgcgctccccgtagaggtcctcgacaacatcctcggccgcctccacatctacgaggtggtccgcacctcgtcgctctcccgcgcgtggcggcgccgctgggagtcgctctccacctcgacctgacccgcagccccggcgtcgcggcgtccgacgtcgacgcggtcctcctccggcgctccgccgccgcccccgtccgcgccttccgcctcgtcgcgcgtgacccctcctggttcgtcgacgccctccacgactggctcctccacctctcccgcaacggcgtccaggccctggagctgtggttcccgacctacaacttccagctccattcctgcctcttctcctgccgcgagctcgcctgcctcgacctcgacagctgccgcctcccgcccgcacgcatggggtttgagggattcccgaacctgaagaagctacgcctccatgaagttaccctcccggagcacatgggaaatatgttggctgccttgatttccgcgtcgccattgctggaggaggtggagcttgtaagtgtgtttcttgtcggcgactaccctgacgaggagtgggtgattcgtgcgcccaatctccggaagcttataatggttgctgcgtttccttatggtggccgagtggaggagcttccacgactggagcaagggattctgtgcggccccaactacgccaagttcttgacggggatggctcatgtgaccaagctagagttcatgtgccactatatgttggtaaagattctggattttcatggcttaatgttttaattgattgctttttcataagtggttgaggacttattataccatgcctatgtagttgcttactgctaaattgctaattgcaaaagatagaaaggaaaagaagagaagaggctttttatattcatagaaaagacaatgttcagataacacttcattttagacagagcagttctacatcatctgagatgtataatatttccaacttcttcttcctgccacacattagaattaggaaatggaaaaacatgatatgcaacattactgtagaaatcaatcaatgcccactgaaacattactttttgtgcaaactcattgttcgttttttacttcatctgtattgtctaacaccttatttgttttcctttttcagtcaactgaagttgatgtgctggagcagctaccgttcttgtttgagaatcttaggagcttagtcattagtgttaatttctgtaaaatgtcccacattttatttatgttctgtctacttagaagtgctcctgttcttgaagaacttgatgttgtggtaatgttaaatgatcacttgcaaattcattatgccattacttgtttcaaggtaatgatactgtctatgtttccttcatagggacaaagcaatgatgctcaggatattgatgcgaatgatgagttcttgaatgctcagccaacctatgatatgtttgcgaaacttcgtgttgtgcgaatgaagaaggttgcttgcctctgtaatgagatgcactttatggagtttgttctaaacaaagcaagagtactgcgagtgctatctgtttatccttcttctggcgtcacttgtagtaatgagcaggcttttataacagaacatccgagagtttcacctgatgcacaagtcatcttcatgaatagagaatctgcaaacaagtaagcattctgattctaatattttcttgtgttgttccataaacccatcggtcactgtcttgtcctaaaccacaattaaatacagttatacttggcaatgccttctagtatacatatttggtcgcgctgttgaaatgtaaatgcactccagggtggacaccatggaaacctgcattcctagttaggtctgagtcttacaggaagttgttctgccccctcatgctccatgcttccacttcctccttcgacaatcgacaactctccagatctacagcatacctgtccatctcctactcatgcttcagctaaccagataaacttctatctgtttacatctgcaatctgtatatctcggttcttctgctctgctttccctttctgatcttttttatatcaagttccaaacatagagaattattcctatgcatctactctaactaggactctgtcactgaactctatagttccaagcaagtctgataagttcatcttttgatatattttagaactgtcactgaactctatagcttgttactacaactgtcattgaaatctataactgagtatttatttcatgcctttatccttgtactctgtgacaaccttgctggtatactatatgcacacttggtaagtaaactgatagtgtattcactgccttatattggctatagcttacattataaagttaagttggtccttccaacatattgaaaaatgtatttgtgcttctcaaaatctttagcagtgaattgcactcaagaaactaatttttttctttgaaactgcagtagtgcggtttcatactttcacgggagcctgtaagctccccagtatgtggattctcctctccttccaaagtgttgctgcgatgcatgatgaggagtaatggtacctcctcacaaataagaacttgaaaacacgctgcccctggccctgcgtgcttgcaagtaccattagagaagcttcacgtggtaccaccccacatatttcacttttacatgtgacaagggcctctgcaacaatggcaaggtggcgtggatgcatttgctaggaggtagtctcgattgacagttgataatctgcttcttagctggaagctgaattttgttttgaggtgaaaccggaatgagttgaaagattttgaatcaatttgtaaattgttgaatcaaactgaaaaaaaaatcttttaatatgagtgggatgacattgaataggggaaatgtttttcgtattgagttgaaaatttcttgaaccgagttgatgagcagctgcagattccaatgtggggacaaatcttaggacaggcagtgggagagggctactggggaagtggggagtcctcataacatgtgttggtgggacaaagtagtaaggcatgaatggtgtatctgtccccttcccacaaacactcttaaaatagttgctcatctttttttttcttgtatatttagcactatgaaatttgccttccccgtatccatctgatactgatattcttcttacttttaatctaacttaatgccagtggttacatggacactcccagtgttaattataagttggaaacaacaagaacaggcaactggatagatcttgcacatccttgcaaaattaatcggttggatctagatgccgtggatcagcataaacatattgaggagatgttgctaatacggcaaaagttactgaaagaacgcaaggagatggcacaggctcttcatgaagataagaagcttttgctaaactacttcgctgcagttaaaaaatacttcacttctaacctaaaggtagctaagattaaccatttttcattttttattcttcaattcattagttcttacttcctgatggaaatgcagtatctgtctgagcaattgaacatttccattccaccatttcctgagccttcgtcagtctcatcatcttcccatcctgtaagtaatattacttgcataccgaataccagttgtattcatcttgcatacttgtctcataatactttttgtcatcaaagacctcgcccaggttggcagaagctcttaccgatcctgccagtcgtagtgctgacaatgtgcaagcagattctcgagctgaccaggtagccattggtgcttccagtgctcgtgccaattctcctaaacctgaagacaatgtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0461100, RefSeq:Os08g0461100