Os08g0461400

From RiceWiki
Revision as of 13:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0461400| Description = Conserved hypothetical protein| Version = NM_001068517.1 GI:115476771 GeneID:4345769| Length = 9431 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0461400

Description

Conserved hypothetical protein

Version

NM_001068517.1 GI:115476771 GeneID:4345769

Length

9431 bp

Definition

Oryza sativa Japonica Group Os08g0461400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22748577..22758007

Sequence Coding Region

22748905..22749147,22749235..22749387,22756911..22757138

Expression

GEO Profiles:Os08g0461400

Genome Context

<gbrowseImage1> name=NC_008401:22748577..22758007 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22748577..22758007 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgctgtttcctgctaaaaacggggtgtatcaccagtgggttattcaggctccaaatctccagaacttttttattactggactgtatgacgatggttggcagatcggtgatctcacgttccttgaggaagcaacagtcgattggccattatactcatatgaccgtgatttcgtcaagcttattacagggttgtctcaagcaagggagctcgactttgcaatgccggtgagagatgttaatgttctggagggactgtcgtgctcctttaagaatctgaaatgtttatcgttatgtacaagtcttcacttgttgtcaaatgttttgtcgtttttttgtataatcaggaatgcctctaaactcgaaactttgcgtattaagctctttgatgattccactcaagacgatgaagttgataatgattttctaaatggacagtggactgatgacttattctccaatcttaaaagtgtttacgtgagaaatatgacgtgcaagttaagtgagatgcattttattgagtttattttgtcaaaggcaagaaatcttgaaaaaaatgatgtctgcctagctgaagattgttcgaaatctaatgaagaggcagttatagaacttgcaaaataa</cdnaseq>

Protein Sequence

<aaseq>MLLFPAKNGVYHQWVIQAPNLQNFFITGLYDDGWQIGDLTFLEE ATVDWPLYSYDRDFVKLITGLSQARELDFAMPVRDVNVLEGLSCSFKNLKCLSLCTSL HLLSNVLSFFCIIRNASKLETLRIKLFDDSTQDDEVDNDFLNGQWTDDLFSNLKSVYV RNMTCKLSEMHFIEFILSKARNLEKNDVCLAEDCSKSNEEAVIELAK</aaseq>

Gene Sequence

<dnaseqindica>8861..9103#8621..8773#870..1097#cttctcttttttttcttttatatcactggctccctccagctcgtagtgctcgccgccgatgtcgagctcctaatcgctggcggccgaaacgccggccgcctccgcggcccgcatcgccggccgcgacctcaatcgtccgtcgaggtattgcttcctttctgctcctcgcaggtgattaacgcttgccgtccctaaaccctagctcggattttggcgaacaggaatcccgtattgctcgatcgaataatcgggatggtaatgacgccgtcgcctggctgcaagctgtggccgtcgcagggcgatgcgggaacggcggcggcggcggccctggactccctcccgccggagatgctcgccgacgtcatctcccgtctccccatccgcgagaccgtccgcacttcggcgctctcccacgtgtcgcgccgctgctgggagtccgtcccctacctcaccttctgttggccacgccgcacgccccccggcgccatcagcaccgccctccggcgctaatccggcctcgtccgcaagtttaccaacttgtatatcggggaggaggaggaggaggaggcgccgttccgctactccgaccgctggctgctcctcctcgccgggaagggggtccaatccctcttccttgctttctgacggtcggacgaggagatccctatgctgcattctctatcttctcgtgctgcgagctcacccagctcgaacttgcagactgctacatcccagggttgccaacctgcttcgcggggttcccaaatctaaccagtctaagattatcagatgttggcttcccagatggagcaaaaggattggagatattgctcgctagatcgccattgctaaagagcctttcactcctgatgttgctgtttcctgctaaaaacggggtgtatcaccagtgggttattcaggctccaaatctccagaacttttttattactggactgtatgacgatggttggcagatcggtgatctcacgttccttgaggaagcaacagtcgattggccattatactcatatgaccgtgatttcgtcaagcttattacagggttgtctcaagcaagggagctcgactttgcaatgccggtaaaattgttctactcaacttgttttttcacttgtacattatctgcgtacagagaagttatttttttagagaggagaaggccttgcttctattgaaagcagcattggtaacagagttaatatgggggatgcccattttacataccgatcaacacagaaacaaaacaacattcagttctgaaccccaagaggagaaacaacagaaacgaaacaactctcagacaaaaaacactaagcagcgcactacagcagcagaatggacaaaacgacattagcctagaccagttctttgcgcccccaggcttgaaatcatccctttcagcttcacagcaatgtgatccatcagagcaacttcctcagagcgacataaagccttccactgcagcaaaaaggaaacaatttggaatggcaaaatcagcggagaatacacaattttgtttctaaaaatcatgttattcctggttgtccagagcacccaggaaactgcaacaagtaaagctgaaaacactctatccttagctttattattcatttcattcagaagaaacaaatcctcaaaattcctaggagctaggtgccagccaaaagaatctctacagacacaccacacaaatgaagccatagggcaggtaaagagaatatgagaagtggactctatctccccataaagctggcaatattcagaccctgaccagtttttcattttcagttgttcagctgactggattctattcttcctcgcaagccaaacaaaatgtttcatcttcatgggggcagggcatttccaaatcttgagcatagtaacatctctcacacctctaaaggcaatcatctcatacagggatttagtagtgtactttttgttagtggataggccccaggtcagagtatctggattctcactcagcgaaacctctgctatcatctctttcaactcattccattgttcttcttctatattcccaaaagatcttctaaaagttaaacaatcaaatcccctagtgcaaacctctgaaactgtgatgtattgttggttgcagatctcataaatgttatggaatctggtctttagggggcaggtgcccagccacacatcctgccagaaccagatatgactaccattccccagggaccaaacagaacctaaggacacccatttcctcacattcaacacccctttccaaaattgagaccctttttctccaacaaactggaagatacctccttgctgcaggtattttttcctcaacaactcaatacaaaggctattgtcatgggattcaagtttaatgatccacttagctagcagagcaatgtttaacatcctggtttcagttagcccaatccccccaaattctttagggaaagcaaggtcaatccatctcaccatgtgatattttctcccttatctattaccagcccaatagtatttcccccttaaagaatcaaacttatggtgaattccctcaggaagctgataaaagcccattgcataagaaggaatggaagataaacacgcatttatgtgaacagctctcccagcataagttaggttacccccattccaaagagacaacctcttctccattttatgtggaagaaaattaaactcttggttgagaatcttgtcaggactgatgggcagaccaaggtatttcatgggaaatttgcctctaggacaattaagcatcttagcaacctcttcattttctgcatctatcaacctcacagtgaagatttcactcttatggtagttaattttcatcccagccatctcttcaaaacaatataacaaaaatttggtggccactatttgtctgacatcaaaaggaatgaaaatgacagtatcatcagcatattgcaaatgggtgattcccccagggaagataccagggacaaggccagtaagaatactatctctcttagcactatctagcatggctgccaaagcatcactaactaggttaaacaggagaggggaaagggggtcaccctgtcttaagcccctataagttctaaagaagtcagacctctcaccattaatgttgacacaaactttatcccacatcacacaagccttgatccaatcaatccaaatcttgggaaagccttttctctctaggacctcaaaaagaaaattccagcttactctatcgtaagccttttcaaaatcaattttcagaataatgccctgctgatttttcaatttgaattcatgaagcacctcatggagaattatgcacccctctaaaatgaatctccctgggataaaagcagtttgggtctgagaaatcacaaagggagcaacctctgaaagtctgttagtcaccaccttgctaaggaatttaaaacaatcattgaggacacaaatgggtctaaattgtctgatatttgtggggtcagagctcttaggaatcaaagaaatcacaccaaagttaagtctctttaaatctagtttaccctcatacaacattaataacatttcaaacagatcatttttgatttcaggccagaaagctctgtaaaaatggatattaaggccatcaggaccaggagcaatattcaacttagcctccctaatgactttatcaagttcttccatagaaaaaggtctagtgatagcctccttttggtcagcattaaggcacagctcagattgccaaatttggggagaaagatgcaccgtagaaagattatcagctctgaacaaggacttataatactcaataatgtgggatttcagatcttccttggaggtcaactctctaccctcatcttctagggagaggatcaagcatttcctccttctgccattagccattctgtgaaagaactctgtatttctgtcaccttgtaataaagtcatttccccacatctcttgtgccaaaacaattcctccatttcatagatatgttcaaggtcagcctccatctcatatcttttattccattcatcagggcttaaatctctaatatcagcttgggcatccaactcttggatctgggttagaataacagctttctgttggttcttctcctgtctaagattcaattcccagcctttcaaaaatcttctcagaaaggattgcttcttattcgagtaatctaaaatatatgaaccatctcttggaatcatgtgttgtcttaccaactcatgaaaattttccattgttagccaggctgattcaaatctaaaatactttgggggtctctcaatatcctcaccaatattaagaatgggaggggaatggtcagaaccaaccctgagaagagaggagagaatagaatttggatacttatcttccgaactagaactagtaagaactctatcaaggacttcctgggtagagtagtcttgtttattagtccaagtatatctagaaccacatctgtaaatatctctaagctcaagatcagaaatgaaagaattgaaaagatccatagacctcaagttcaagttcattagacttttcactggcaaacctatacatattaaaatctccacctatgacaaaaggatgatgaatatcttgcaaataccatctaagctcattcagaaaatcaggtttcaaggattctaacacagggccataaaccacaataacctcccaaacactattatcttttttatatctgaactcaacactaaggaagaatgcaccagcgtgggtacctaacttctcaatcaactcatcattggtaccaataaggatgccaccagaagcacctctagaagatttccaagcctaagaaaaatccttagaaccttggaaagaattcaactctctatcatgaaaactctcttttttggtctcctgcagacaaataatatcaactcctctatctctaatcacctctttcaattgttttttcctagcaatgtttcccaaacctctaacattccaaaagaggattttcattttttcttatgtttttttgcaccacctctcttcttcagctctaaactctcagaagatatctccatattattcatctcttgagaaggggtatttaaattgtcaacctcttcccccatgttgtctgggagctctttctcatttctcaataaagagtcaacatctgtcatctccttttccttctcttttttccatctcatctcagctaatttagcttgaaccaactctttagccttaatggtctcaatggtatttgcaatttcttcctcattacttcctagagagatattagcagctatagcaatactattcagctcaacaggatcaataatttgaaaaacaacaaaggggttagagttacctccagtctccaggttcttcttttgagtaagcagctcagctatcttaggaatggggactgaggccatgtctctgtttctcaaactcattctagaagtgatcgcaggttcagattttttaggtctgttctttttgtaggaaacctcctgaaagctatcttcctcatccaactcttcctcctctctctgtattgcaatgtcaaataaagatggaatgtcacatttttcaaactctaagattccagtcaacacatcctcattatcaccttcctcagtcgatttttgtgtgacagggaaatcaatctcctgagattcatattctacatcttgtgttgtgtttccctcccacactatcattgctttagagtcaccctcttgatctaccatactctccttttccaccaccagcagactttgttttttacaggcagccctcttagtaggacactgctgagtctcactcaggcatgtctcttccaatgcctttttccctttgtaagcaggaggggctgattgaacatcacctctggaacctcccatgaaagatcttctatcatgggctgatctacctctagctgggctttgagtattttgatcttcatccacattcatgtcatcattatcaccattacccttcttgtccttatcatcaccatcatccggggggaattgtgaattatcataaggaggataaccctctggttcccaccttatcatgtaccccaccttgttaatgtatacatggatagcaaagtgaagttcccttggatccttacaagctaatctttctctgactggaccatcccttctaagagtgctcaaatctatcatctcaaattcaccaacaagctccacaatagctttaatatgctcttcagatctagccaatttaggaaccccaaagattttaacccaaacaacagccaattcatcaatagcatcttcagtcattcctgtttcaaccacactggccttgatatgacaggtatcaaagtcgaaacttttacatgtagaaattttgcttctcacctcttctgatgggaaattaatcaaaaactctctctcattcttatcatctcaacagaagcaactccctgcaacacagtcagaatacctcttacagggtgtttggccatctcaacatcagaaacatctacctgcaaactgtagaaaccctgacccggaataccaaaaccacatagcttcacacctctctttgactgtaacatagggaagtttgcagagatatgacctgagctatggcaggagtagcagagcggagggtttgtgcacgaggcttggtgatgaccttcacggccgcacttgaagcatttcatcgccggcttggatccccccgctccacgatctccccaatccctacgctcttggccagggcgaccaggacgacgcggatctcccacaacttgatttccttttgctagaagctgcttgcgaagttcctcttcctcacggtgcgcccaacttccaccagcttgcttcccccagtcgcctccagcttgtcgaccccaatcaccacctccgtctcccgactccatcgccttcctcttgttcgcttgccaatccggacggcctggagggggacgtcgcttcatcaccacttgcgcgaaagtgcggtgatcacaccttctctccagaactctccagatccggcgtgcggagtcgccaaatcgccggatttcttcgcttctcgccggaaaccctagctgcggagagagcgaaccctttctcacccacacccactcacggaagcctctggagactcggggaaagaggtcctcgagtttatccccatagcaaccgccacgtgtctgccatggatgctcccccctgcacgagtctcactgtagctagcgggctgggtcgcacctcttgaatcgcgccaaaatcggcatggatattgaacgaacacgcgtcaagtttctctcgtgggaattgcggagaagggccctcatggcagtggctcgttgccggaagagccgacgagttcgccgtcgccgaggaggaggcgacctctccgaacgcttccaatggcgccttccccttgatctggtcaaagctgaccccctcagccctattaccgccgcgtggcttgccccctggggcacacgccgccgccgtgagcacgccgcgtggcttgccctctggagcacacgccgccgcagtgagcacgtcggcgaaggtgtagcccgccggccacgatcgcggcgaggtcgcattgttcgtcgcccttctcacctcaattattggtttcagagaagttatgagtcacaatggattttcttgcactaagattaacaaaatgtcatctttatgtaatatcctaccaaactaatttatcatcagaaccaatttaaattatgagttcaagtctgcaatagctcatttcatcaaattatgcgcccaactcagagcttgtgaaatacattgccatcccactatcctagtcaacttccaaatacattaccatgccacatttagcttgtatgccatgttagttgatcgcatggcgcatggcgaaaacatggagattagtaaatggaatggtgatgttgcacctttaatgtggcactcaactgagccattttgagactggggcagttgactagggtgatggcatattgagttttaacatggcagttctgagttggctgcctaatgtgctgagatggggtagtttggacttgattggagcttaaaacccagccaaacacagtgtgaaagtggccttgttgacacgacgaaataattttccgtattgtgccatttttttttgtagcaatgctagtgcaatgaataatagttttctgttttatctgaacatgtagatcatagagaaagccttcgattgtaagaaaacaacttttagaatttttggttcaattacagtgttgcgagggattctaagaaattggaagcgttatatttgtagattttggtagtattttcttacagaacatcctgttgcatcgaggaatacaaaaaaaaaagtatttttgaattgcaattttataaatagtgattgttgaagtccattctcttctgttgttgtgtgtatgttatgttattattgtttgggttgaatatgttttcattactttcataattccaaatattttatattgataatttcataaagcagaccattttagtacctaatggcaagtgcacaaatctaatttgtattgactttgtcttgacttgtatctaatgtttcactttatgtcaggtgagagatgttaatgttctggagggactgtcgtgctcctttaagaatctgaaatgtttatcgttatgtacaagtcttcacttgttgtcaaatgttttgtcgtttttttgtataatcaggaatgcctctaaactcgaaactttgcgtattaaggtaatatcgttagtaattgaaaatttaatagtacagttttctatagacttctgtaagtatataagttataattgtcgattttggcagctctttgatgattccactcaagacgatgaagttgataatgattttctaaatggacagtggactgatgacttattctccaatcttaaaagtgtttacgtgagaaatatgacgtgcaagttaagtgagatgcattttattgagtttattttgtcaaaggcaagaaatcttgaaaaaaatgatgtctgcctagctgaagattgttcgaaatctaatgaagaggcagttatagaacttgcaaaataaaatataggcgagcttctccacaagccaaggtattcttcagccgtgttgagtaagattaatttttgaagtatctgtaacttgcgtgaattaggacccaggctcccagctttggtcctcctcctaagaaaaaagaaagtcaagttaagcttgaaacttcaggcgctagatctgaattatgtggatgaagcagctacgattattgtaagaattatttggatgcggcacctatgattattgtaagtctaactctgggtgcgatgtagaattgtggaagtagtaatagattgttactgaacaaaatgttggattttttgtgcttttgccttct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0461400, RefSeq:Os08g0461400