Os09g0434500

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0434500| Description = Similar to Ethylene response factor 2| Version = NM_001069787.1 GI:115479316 GeneID:4347142| Length = 3213 bp| Defi...")
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Gene Name

Os09g0434500

Description

Similar to Ethylene response factor 2

Version

NM_001069787.1 GI:115479316 GeneID:4347142

Length

3213 bp

Definition

Oryza sativa Japonica Group Os09g0434500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16613145..16616357

Sequence Coding Region

16613253..16613580,16615094..16615956

Expression

GEO Profiles:Os09g0434500

Genome Context

<gbrowseImage1> name=NC_008402:16613145..16616357 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16613145..16616357 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcggcggagcaatcatctccgggttcatcccgccgtcggccgctgcggcggcggcggctgcggtggccaagaagcagcagggcaggagggtcacggccgacgtgctgtggccggggatgctgcggaaggggaaggcggcggcggcggaggaggactttgaggccgacttccgcgagttcgagcgtggcatgagcgacgacgaggcggaggggggcggcggcgaggaggaggaggacgacgacgacgtggtcgtggtggtccccccgccggcggcggcgaggttcgtcgtccgtgccgcggccaaggcggcgcccccaactgcagatgggatgttgactacaaagcttgtccaacatgatggacctactgctagatcagcaaagcacaagaggaagaatcagtacagggggatccgccagcgtccctggggcaaatgggcagctgaaatccgagaccccagcaagggtgtccgtgtttggcttggaacatataacactgctgaggaggcagctagggcatatgacgctgaagcccgcaagatccgtggcaagaaagccaaggtcaactttcctgatgaaccagctgttgctcagaagctctccctgaagcaaaacgctgccaagcaagagaaactagctccacctctgaagacctgtggcgatgatgctttctttcagctaaacagttcagacaatgatttgtttgcaatgcttgcaaaggtgcctgcaaagccggcagagcctgttgatctcatgcctccagtcaaacctcttgcttccactgagacattcgagatgaacatgctctctgatacgagcagcaactcatttggctcttcagactttggttgggaggatgacaccctgaccccagactacacttcagtcttcgttcctaatgctgccatgccagcatatggtgaacctgcttacctgacaggtggagcgccaaagagaatgaggaacaactatggtatcgccgtgccccagggaaatggcatgcctaatctcgcacaaaacatgcccaccttcgatcccgagatgaagtatttgccattaccttatgttgagagcagctcagatgaatcaatggacaaccttctgcaaaatgatgctacacaagacggggcaagcaacgagggcatctggagccttgatgagctgctcatggcagctggtgcctactga</cdnaseq>

Protein Sequence

<aaseq>MCGGAIISGFIPPSAAAAAAAAVAKKQQGRRVTADVLWPGMLRK GKAAAAEEDFEADFREFERGMSDDEAEGGGGEEEEDDDDVVVVVPPPAAARFVVRAAA KAAPPTADGMLTTKLVQHDGPTARSAKHKRKNQYRGIRQRPWGKWAAEIRDPSKGVRV WLGTYNTAEEAARAYDAEARKIRGKKAKVNFPDEPAVAQKLSLKQNAAKQEKLAPPLK TCGDDAFFQLNSSDNDLFAMLAKVPAKPAEPVDLMPPVKPLASTETFEMNMLSDTSSN SFGSSDFGWEDDTLTPDYTSVFVPNAAMPAYGEPAYLTGGAPKRMRNNYGIAVPQGNG MPNLAQNMPTFDPEMKYLPLPYVESSSDESMDNLLQNDATQDGASNEGIWSLDELLMA AGAY</aaseq>

Gene Sequence

<dnaseqindica>109..436#1950..2812#ggcttcctctcccactgcgccctccgcgtgagcggcagcaagtgttcactgcgttcttcttctcgatttatctttcttggtttcttgatctgtagcttattagcggccatgtgcggcggagcaatcatctccgggttcatcccgccgtcggccgctgcggcggcggcggctgcggtggccaagaagcagcagggcaggagggtcacggccgacgtgctgtggccggggatgctgcggaaggggaaggcggcggcggcggaggaggactttgaggccgacttccgcgagttcgagcgtggcatgagcgacgacgaggcggaggggggcggcggcgaggaggaggaggacgacgacgacgtggtcgtggtggtccccccgccggcggcggcgaggttcgtcgtccgtgccgcggccaaggcggcgcccccaactgcaggtgaaaaaataacgcataaagctagctctttttcccccttttctcgttagacgagcgcaagatgcggccttttttctgggtccgtttcttgcgttcttcgtgtgatttggggagagaattggggtctcatggggtagctgccaaatggggcttcatcaggttgcgccatggatttgatcttgatgcgaaccatgggacggcactgtgtagtatagtttttttttcttcaatctagcgtgttattagttcttaacttcattaatacctgtgtacgtaaacttgctagcgaatctggttcttttagatggatagcatctgtaggtttggtggtttacgaatttacactacgaaataggaattcaactttgtcctagattctactcttctttctttttcctgaattggagtagcaaagagagagtgatgagttttagatatttattcttgtgatttcgcagtgtcattatgtgttttaatcactaatatttgtgttggattagagaaaatttggctttgtagagttgtagtatgttcttggattaacctatgtttatggatgctcttctgtcgctggatttacttgctttgtttctaataagtgatctagtagtgtaattacgcaaaacttaatggccttttttttttccttggcaaagtttcatctgtgccaccatctcatcttgagatttggagtactctttgaggcatatttttttcttgtactcttgatttatcatatttagctgttagttttcagagtatgatgggttctgtagtattatctaaaaataaaaaaaatgatgggttctttagttgttccactctttatatagattgttagatgcatgtcaaagctcccttcttttttttcttgttaattctaaacagaagaaactttaggtgatgctgtcaaagctcccttcttttttttttcttgttaattctaaacagaagaaactttaggttgttaatttgaactttgttggtgatctcgtactctcattcaagggatacgaatttaaagaattattttatttttttaaaaaaactaacgaatataaggaactctaatttagtagtttgtacagttgattttgagctacatcaaaatataccctcagagggacctcgttagttttatgcatctgagatctcattcctggatagaacgttgcaggtgagtagatgactactgtagacagtatatgtagattattatctattgttaatcatagggcaagtgagtagttctacactttgacagtgcttacaccatatgcttgctatattcatggactttaagatttcttatatatgtcatgatttatttgagaagtgatcaattgaactgattcatgtctcaacctctctgtgaacatccagtataacttcatcttcatgttgcttgagagtgtattgtgtaacttacagtttatagctatgatatttcctttatatccttcttccaaatctgtttgttgagatgtatactaacaaataagctttcgtgtagatgggatgttgactacaaagcttgtccaacatgatggacctactgctagatcagcaaagcacaagaggaagaatcagtacagggggatccgccagcgtccctggggcaaatgggcagctgaaatccgagaccccagcaagggtgtccgtgtttggcttggaacatataacactgctgaggaggcagctagggcatatgacgctgaagcccgcaagatccgtggcaagaaagccaaggtcaactttcctgatgaaccagctgttgctcagaagctctccctgaagcaaaacgctgccaagcaagagaaactagctccacctctgaagacctgtggcgatgatgctttctttcagctaaacagttcagacaatgatttgtttgcaatgcttgcaaaggtgcctgcaaagccggcagagcctgttgatctcatgcctccagtcaaacctcttgcttccactgagacattcgagatgaacatgctctctgatacgagcagcaactcatttggctcttcagactttggttgggaggatgacaccctgaccccagactacacttcagtcttcgttcctaatgctgccatgccagcatatggtgaacctgcttacctgacaggtggagcgccaaagagaatgaggaacaactatggtatcgccgtgccccagggaaatggcatgcctaatctcgcacaaaacatgcccaccttcgatcccgagatgaagtatttgccattaccttatgttgagagcagctcagatgaatcaatggacaaccttctgcaaaatgatgctacacaagacggggcaagcaacgagggcatctggagccttgatgagctgctcatggcagctggtgcctactgaggagacgaaatgttctggtcagtgtggtctgtcactagcaaaccatgtaaggcactccacactacctactattttgatttcttgtagatacattttcatgtacagattacatatgttgtaaaatgggatatggttttcttgtcaggttgaatgtgtatggccaagatgaagagctggtgatgtctgctatgttttgtagagggatgctaccaaagtaatgctagaatattacaagctgctatcagctgtactctctatgacaatgtttatactatgtttgctgtatggtgtggtctatgatttgaagtatgttggagactgattcaaataactgccttggccatgtgtgtgctgtaatgtgcttattaagttatatagttgtgctcatattgcgtatctac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0434500, RefSeq:Os09g0434500