Os08g0465800

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0465800| Description = Glutamate decarboxylase (EC 4.1.1.15)| Version = NM_001068533.1 GI:115476803 GeneID:4345787| Length = 4086 bp| Defi...")
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Gene Name

Os08g0465800

Description

Glutamate decarboxylase (EC 4.1.1.15)

Version

NM_001068533.1 GI:115476803 GeneID:4345787

Length

4086 bp

Definition

Oryza sativa Japonica Group Os08g0465800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22966869..22970954

Sequence Coding Region

22967000..22967479,22967721..22967773,22967858..22968111,22968407..22968621,22968714..22968914
,22970123..22970327,22970734..22970831

Expression

GEO Profiles:Os08g0465800

Genome Context

<gbrowseImage1> name=NC_008401:22966869..22970954 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22966869..22970954 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgagcgtggccgcgaccgactcggacacggcccagccggtgcagtactccaccttcttcgcctcccgctacgtccgcgacccgctcccgcggttcaggatgccggagcagtcgatcccgagggaggcggcgtaccagatcatcaacgacgagctgatgctggacgggaacccgcggctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatcatggactccgttaacaagaactacgtcgacatggacgagtaccctgtcaccacggagctccagaaccgttgtgtgaatatgatagctcacctgttcaatgcaccaatcaaggaggatgaaacagctattggagttgggacggtgggatcctcagaagcaattatgcttgcaggactggcattcaagaggaagtggcaaaacaaacggaaggaacaggggaagccatgtgacaaacccaacattgttactggtgctaatgttcaggtttgctgggagaaatttgccagatattttgaagtagaactgaaggaggttaagctcagtgaaggatactatgtcatggatcctgtaaaggctgttgaaatggtggatgagaacactatatgcgttgcggccatcttgggctctactctcactggagagtttgaggatgttaagttattgaataatctcctaacagaaaagaataaggaaactgggtgggatgtgccaattcatgttgatgcagcaagtggaggatttatagcaccttttctataccctgagcttgaatgggacttcaggctaccactggtgaagagcatcaatgtcagtgggcacaagtatggccttgtgtatccaggtgttggttgggtcatttggcgaagcaaagaggatttgcctgaagaactcattttccatataaactatctggggacagaccagccgacgttcactctgaacttctccaaaggttccagccagataatcgcacagtactatcaactaatacgcctgggattcgagggatacaagaacatcatgcagaattgcatggagaacacagcaatactaagggaaggcatagaggcgactggtcgattcgaaatcctctccaaggaggccggtgtgcccttggtggcgttctcgctcaaggacagcggcaggtacaccgtgttcgacatctccgagcacctgaggaggttcggctggatcgtgccggcgtacaccatgccggccaacgccgagcacgtcgccgtcctccgcgtcgtcatcagggaggacttcagccggagcctcgccgagcggctcgtctcggacatcgtcaagatcctgcacgagctggacgcccattcggcccaggtgctgaagatctccagcgccatcgcgaagcagcaatcgggcgacgatggcgtggtcaccaagaagagcgtcctggagaccgagagggagatcttcgcgtactggagggaccaggtgaagaagaagcagaccggaatctgctag</cdnaseq>

Protein Sequence

<aaseq>MVVSVAATDSDTAQPVQYSTFFASRYVRDPLPRFRMPEQSIPRE AAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQN RCVNMIAHLFNAPIKEDETAIGVGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPCDKPN IVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTL TGEFEDVKLLNNLLTEKNKETGWDVPIHVDAASGGFIAPFLYPELEWDFRLPLVKSIN VSGHKYGLVYPGVGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYY QLIRLGFEGYKNIMQNCMENTAILREGIEATGRFEILSKEAGVPLVAFSLKDSGRYTV FDISEHLRRFGWIVPAYTMPANAEHVAVLRVVIREDFSRSLAERLVSDIVKILHELDA HSAQVLKISSAIAKQQSGDDGVVTKKSVLETEREIFAYWRDQVKKKQTGIC</aaseq>

Gene Sequence

<dnaseqindica>3476..3955#3182..3234#2844..3097#2334..2548#2041..2241#628..832#124..221#gcgtcacacgcacacctcacaccaccaccaccaccagaagcagcgtcgcgaagaactcgattccctcgtccgcgtcccgcgcgcggccggcgtcgctgtcccggtgaaccgcccgcaacagcgatggtggtgagcgtggccgcgaccgactcggacacggcccagccggtgcagtactccaccttcttcgcctcccgctacgtccgcgacccgctcccgcggttagtacttagcaccaccaccaccacgtcgtttcatctcagcagacatcagttgttgtcacttctaatcttccactattagtagtacggttgccacactgctagccaatccacttcgattggttccaccgcgcctaccgagtttcccttgctaggcagtagagagagtctgtgatcgagagagaagaggatcgagcagctagcaagccggcgggcgccatggtgctctcgcacgcgagctccggccgggacgacgccgtgcgctgcaccttcgcgacgcgctacgcctgcgagacgctgccgcggtgctggctgcatgctccgatctctcggttgggttttggccaatttgggcgccgcgcggggctgtgctgatcgatcgattgcttcgttgttgagtgtgcaggttcaggatgccggagcagtcgatcccgagggaggcggcgtaccagatcatcaacgacgagctgatgctggacgggaacccgcggctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatcatggactccgttaacaagaactacgtcgacatggacgagtaccctgtcaccacggagctccaggtcggaattaaaccacatgggatctttcttctattttgttctccgggctgataatacttgcccttttggacaagggtgaagtcaaactttagaatctttgattataaatcatttttaaaatatttgtcttttaaatatggtgactattatggtgactatatgtatagattagtcttaaaaattattttaataagatcatatatttgctaacaattttatacatattataataaaaaataatagttaaagttgttttttttggagaccgtgcccttgtccaaaacgacaagtattatcaacccggagggagaacatatatatggggggaatcctgtttcaacacaagtaatgttacgtactcccgttgtgagatttgctttgagattcgcgcaccagcatagttgattgaattcctctgtttagttcagctctagtcttaaggaataattaattttgtggaactaattagtacagctctagtactccacttcgcaaggatggaaggataaggatcctaacacctgttatttgggcagttgatagctgatcataattaggttatggacaagttatgacacatcatactttttgatgtgattggacttttctgggtccataaccaacaatcctggacagttttcagcttgttgctgatcacaacatttttactgaatatgttctagaaagaacatttttgtttactgaatgtagaaaaggggaagttttaccattcaccttgtattcaaaatgactccaaccatgccagcagggaattggaaattcagattcatctttatggaactgccatttgatgttagagagtactgctacatacggataacaatggcattttatcaaacctttgttttgtgagattttttttttgctgttcttaaagggaaagggagatactaagaggtatcacattttttgctgtaatttctttttaagttgaaactgaaaccacattcaaataaagttctactgctctcttctcactgtacatttgtattatttggaaagttaacttactggctatttattgatttttaccagggcttttttttatcatgtttcagctttttttgttaacacacagtcttgatttagtcattttttagtcaagctaatgacatattcattcagaaaaaaagaataatagctacatctaactattgtttgctgactacttgcatgtacttttgcagaaccgttgtgtgaatatgatagctcacctgttcaatgcaccaatcaaggaggatgaaacagctattggagttgggacggtgggatcctcagaagcaattatgcttgcaggactggcattcaagaggaagtggcaaaacaaacggaaggaacaggggaagccatgtgacaaacccaacattgttactggtgctaatgttcaggtatttttgtttcattgtcatgtgaagtgtttttatcttagccattatagttatctaagaaaaaggcctgtggtgattccccgtgttcctaggtttgctgggagaaatttgccagatattttgaagtagaactgaaggaggttaagctcagtgaaggatactatgtcatggatcctgtaaaggctgttgaaatggtggatgagaacactatatgcgttgcggccatcttgggctctactctcactggagagtttgaggatgttaagttattgaataatctcctaacagaaaagaataaggaaactgggtatgcattttatctgttctttagtcaatcaactatctgcgcaatgcaacagctagcaatatgcatgctttaggttgtctctggaggtcgatcggtatgaccaggaaaactggtaacctgttgtgaccagattacttaactattcttttgtcaatccctcattacttgtttttatgctcagctgtgtgtgccaaaagaaaacaaaaatgtatacaaattttttatttgcaactcatcttacataaattggccacacttcttgcaaggtagttaatctgttacacaaaacatgcaggtgggatgtgccaattcatgttgatgcagcaagtggaggatttatagcaccttttctataccctgagcttgaatgggacttcaggctaccactggtgaagagcatcaatgtcagtgggcacaagtatggccttgtgtatccaggtgttggttgggtcatttggcgaagcaaagaggatttgcctgaagaactcattttccatataaactatctggggacagaccagccgacgttcactctgaacttctccaaaggtacatacattttcttgtagtttcatcaccaaactttaattcttttgtatttcaacaaaccaagttcaaggcaatattgtgtaggttccagccagataatcgcacagtactatcaactaatacgcctgggattcgaggtactttacttttcttcatatccctcatggaaactgcagaacattttctttgccgagccggcggcaaggacccgctgccagtttattaagattgggacaggtttttgacaagaacaacaaacatggttgttgtgacttcagaaaccagatagtatccacgcaggcgctcatataaacgctcttcctcacataaaaaagagagtttctggccatttagaactattttggtttctttctgcagggatacaagaacatcatgcagaattgcatggagaacacagcaatactaagggaaggcatagaggcgactggtcgattcgaaatcctctccaaggaggccggtgtgcccttggtggcgttctcgctcaaggacagcggcaggtacaccgtgttcgacatctccgagcacctgaggaggttcggctggatcgtgccggcgtacaccatgccggccaacgccgagcacgtcgccgtcctccgcgtcgtcatcagggaggacttcagccggagcctcgccgagcggctcgtctcggacatcgtcaagatcctgcacgagctggacgcccattcggcccaggtgctgaagatctccagcgccatcgcgaagcagcaatcgggcgacgatggcgtggtcaccaagaagagcgtcctggagaccgagagggagatcttcgcgtactggagggaccaggtgaagaagaagcagaccggaatctgctagtgtggctctgtgagaaatgcttgaataacgtggcatgctcgatttgtgcatgggatggccggatcggatgggactgactggcggtgtacggacatggctgcccttgttcttatgttgaactgttgatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0465800, RefSeq:Os08g0465800