Os08g0467400

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0467400| Description = Zinc/iron permease family protein| Version = NM_001068538.1 GI:115476813 GeneID:4345792| Length = 7872 bp| Definiti...")
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Gene Name

Os08g0467400

Description

Zinc/iron permease family protein

Version

NM_001068538.1 GI:115476813 GeneID:4345792

Length

7872 bp

Definition

Oryza sativa Japonica Group Os08g0467400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23075102..23082973

Sequence Coding Region

23076363..23076515,23077177..23077221,23077299..23077400,23078273..23078380,23078509..23078661
,23080030..23080289,23080585..23080689,23081443..23081494,23082124..23082173
,23082269..23082352,23082464..23082848

Expression

GEO Profiles:Os08g0467400

Genome Context

<gbrowseImage1> name=NC_008401:23075102..23082973 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23075102..23082973 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgggggcctcctcgtcctgctcctcctcaccgcggccgtcgccggcggcggcggccacgagggctcctcctcctgccccttccacgcccacgacaagccccacgatgatcaccaccacggccacggccacggccacggccacagctgcggcggcggcggggacgactcccaccacgtgcaccatcatcaccatgggcatgggcatggccatgacggcgggatccagcggcggcttctccccgaggagctcgcggaggaggcggatctcgagctcgactccttcggcgatcaccaccaccaccaccaccatcaccatgaacaccaccaccacgaccaccaccatggccacggcgacttccaggccgagttatcacccttgggtatgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcgtcctgctcccagtaatcttcttccaggggaagccgtccaagaccatggtggattgccttgccatcttcggggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcctttggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcattcacatgcacactctctggaagatctttctattggtttgtctgttctatttggcattgtgtttttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggggctcatggcatgggccaccatcatcaccatcataaacgacacgataggagcgacaaggccaagttgaatcacgcagaaaaggatcatgaggataaaggcgtaaatcaagcagaaaaggaaccttcgcatgatggtgcaattgagaaaacagatggtgtaactcgtgctgattcaaaatctgcaatccgtaagaggggcttatcttctggttccaattccgctgatagagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagattcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgttcataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttggaggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggtcggagattttggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctctgcgttggttgctcttgctggaacagcactggcattgtctttgggaaaagatccagggcattcttctttgattgagggattcactgctggtggctttatttatattgctgttgctggagtcctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttccctgacaatgggaatgctggttgccctcggcatatctctagtagaatga</cdnaseq>

Protein Sequence

<aaseq>MRGGLLVLLLLTAAVAGGGGHEGSSSCPFHAHDKPHDDHHHGHG HGHGHSCGGGGDDSHHVHHHHHGHGHGHDGGIQRRLLPEELAEEADLELDSFGDHHHH HHHHHEHHHHDHHHGHGDFQAELSPLGMWLSAMGCSLLVSMASLVCLVLLPVIFFQGK PSKTMVDCLAIFGAGAMLGDSFLHQLPHAFGGGHSHTHDHQNHNHSHEHSHAHSLEDL SIGLSVLFGIVFFFIVEKIVRYVEDNSQKGAHGMGHHHHHHKRHDRSDKAKLNHAEKD HEDKGVNQAEKEPSHDGAIEKTDGVTRADSKSAIRKRGLSSGSNSADREPVNSESDPA PNKALSSEDSSVSNSNMVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLL AHELPQEVGDFGILVRSGFTVTKALFFNFLSALVALAGTALALSLGKDPGHSSLIEGF TAGGFIYIAVAGVLPEMNDQKTTVKSSMIQLVSLTMGMLVALGISLVE</aaseq>

Gene Sequence

<dnaseqindica>6459..6611#5753..5797#5574..5675#4594..4701#4313..4465#2685..2944#2285..2389#1480..1531#801..850#622..705#126..510#gtggtaacattcggtgtggtagtgggtatactcgtcctcctcttcgtgctcgtcctcgtcgtcaccatcgagggcgtctgcaagcgccgctcctcctcctgattccgccgcggtcgctagccctaatgcgcgggggcctcctcgtcctgctcctcctcaccgcggccgtcgccggcggcggcggccacgagggctcctcctcctgccccttccacgcccacgacaagccccacgatgatcaccaccacggccacggccacggccacggccacagctgcggcggcggcggggacgactcccaccacgtgcaccatcatcaccatgggcatgggcatggccatgacggcgggatccagcggcggcttctccccgaggagctcgcggaggaggcggatctcgagctcgactccttcggcgatcaccaccaccaccaccaccatcaccatgaacaccaccaccacgaccaccaccatggccacggcgacttccaggccgagttatcacccttgggttaggcctttttttggggggtttaactgttcaatttgggttgttctgggcgaaatgtcgttttatgcttgattcgctctcgcgtgattgagaaatttggggattgggtaggtatgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcgtcctgctcccagtaatcttctgtgagtgtcccccaattggatgcttgcaatttttttgctgatgatattcgtgtgctcagtgctcacgttctgtttctctgatttgcgttttacagtccaggggaagccgtccaagaccatggtggattgccttgccatcttcggggtaagtgtggagtttctagttatcaaaaagtttttattagaacaaaacccaaactagcaaatagatcattgactgcaatttaatcgagtctgaatgttctactatggtaccagaatcagcatagtataccaatgggcaatgcatattggaattacagtgcagcttgagctaggtaatttaggtggctgttgaattttaattttagacaaataaatggccacatctgtaccaactgaatgtcacatcctatttgttatattacattgactttctagtttgggcatcaagaaatttagtcaatgttcttcgcgatttgtttacttgaaagccagggaaatggtcctacattttgtgcttttgaaatgtagcaactcaaagtctgttgagatgttatttcagaaaacaaaaccacatgtatttcttgttattcttgaactttggaaagtaataccaaagtttcttattaatatagttttccttggggaatcccatctgcatttctgtattcctgaagattcaatgacataactctgtgggcagtaatcatgttaagttgttaacagcaatagtcaatgttacaacttatgtatgtgtttttttttcttgtttggcctgtgatgattctgtaggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcctttggtatattcctcaataaactgtttatactttttcccccatccagtaaactttacataacacctggtttggagtatgagtaacacaaaacccgaagttatggatattgcttcaataaacctaggttttggggcaaaagtttcacaaaatcctcagtttctttacatctagaacgatgtcaaaaccccaaatgtcatcagttgcactgttgtttcactttgaaattgaaatttgtgcagaagtactatcaaatgattctcattccaatgttacttacgttgccaattaagctgcctgaattgcatgttgctgaattttcagggaaattttgaatcatatgttatattgtcatgatgcaccagagaatcttgatgagcatccaaatactgtttttctcctgaaccattgcttccttttcttttatgaacttcagaaaaacacttaataacaccttttgtttctattttgccatcaaggttcctcctaatacttattgagcacaatagtattatactattccctgtttgggacgtggggatttttgaagtattcctgtgggattcacactgcttccttggaaactataataaaagtcgccgtgtttgaaacaagctaaatattgtatctttagagttccctcttttatctcttgttcacacagttataagtctgttgccttagtatagtggcaaactgtcattgtgccttattggtactcctggttgtaacctttgttgtttttctgttcctaaacaggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcattcacatgcacactctctggaagatctttctattggtttgtctgttctatgtgagtataccctgcatgtctacaccaaattctggtttctttagaagatctttggtactagtatttgctattgctcaaactcagatttttgttttttttttgttattgattgccagctatacatactcaatatttcttggatattgattgcttccttttactgaacacatataactgaaaggccattgaaatttcaaaatagttatcccttattaaccaatatttttttatttatttcatgctattaaattctaatattgctgtaaccctggaaacttccaattctttgatgcagttggcattgtgtttttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggggctcatggcatgggccaccatcatcaccatcataaacgacacgataggagcgacaaggccaagttgaatcacgcagaaaaggatcatgaggataaaggcgtaaatcaagcagaaaaggaaccttcgcatgatggtgcaattgagaaaacagatggtgtaactcgtgctgattcaaaatctgcaatccgtaaggtacattgaagtatggctgatacaaaactatgaagctatttaatatattttccagaagtctttgctatcttttctggttgtaattgcaaaactattcatagtgttcattttatttttggaaaataaaaaggcaatggtagttggcatgatttaggcacaagaaatgctatggataggaaaggttcctaaataattgaggagggaccttttgcttagctgttcaggatctgaagcttttgttagagaaattatctgcaacaactgtggcaaacaatatgtttttgcaaggtggactgaacagtgaacaccagcacccaaatgaatacttacaaagcatgaaacacaacaaacaaccaaaatgtgaaagccacctgttgttgccacacttcctaaatagttagaaggttaaccattacttctggattaacagaaacttagggctgtttggatgagagggattactctagtaaattttatgatttagttcaaattcgtattaaatcatgatgatttaaatccaaagctctatattcaagcagaccactaatgaattgaaatgtgcaattaatttctgaaaggatactgtgtaataaaaaacgagagttgttttggaaaactgttgaaggcacacatattgtggttgtagtactgtttcttttgttctctcaagatatctactctaatgtccttgttaatatcccacagttttgttctttggtgctatacatacttacatgcctgaagttaactgtattcatgaactttgttgttttttctattttggggcatcaccatttctttttgtgatgctgttttccataaccagaccgtcatctttacctgcagaaagttacagtgaacaaatgccaatacatgattctaattctaatttatattcattttggtagatatccgatgatctcacaatagtttatttcttctccgcacttctgtcactgtcccactatactaggtatttgtcaccaagttcttatagtgcatttccattttgagaaaaatggaagtaatgtgcatcagtatatcacaacttgtttcggagaattattgccagtgaggccggacgcttcagtttgcctcaggtttagatgttctggtaaaggaaaatgtggggtggtagcttgtaattggaattttagtagctttctcgtgtaatagtttgctagcttttttaaagagaacagtgggaccaagatggtccaactggacatatgtatatattagaaataaagaaaacagatagtttgcatgcttgaccgttttgtgaagttcattttgttttatttatgcaaataggcattgtatgatcgcatgccagcttatggacttaatgtcttctctgatgaacagaggggcttatcttctggttccaattccgctgatagagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagattcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgttgtaagtctatgatctgagtactattgcattgcagccaaactatgttttttcttgcacaattttcttcagtaggttgtattttgatgagaaattccgataaggcaataacaattatatgaataatgcagcataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttggaggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggttactttcctccccttaggttaactgaaatttcagatacagtatttacaattctgttgacctcattaatcctcatattacttcgtcgcaatattacatggtattagtataaatgtgacttaagccttttatttcatacatcagttcatgctacaactaacactacattctgaccaggaccagtaaattctaatactccagccagtcaaaaatatttcacgtttagaacaagatttcgtcaaacaaatgctatacatagatttacctcaaaaagtactatcattatgtcataaacttattagattttataaatttattctagtatgactgaatctttgtcttaatgtcgaatgatgattttgaccagagggggtatcttaactaagctttcttatatctatggccaacaaaaactcagagctctgattatagaaaaaagatgaatattttgtgcggtgtaacatgaaaattgcacccaataaatatataaaagataacctctatctgcttgctattgactcaacattttgtccatgcaaatgatcacaacacaatgcaggtcacagtttatatgtaagaaatcaactagaaatgctagtatgtcacactgaaatcagtttattgagctaatgtatttatctagcttgttatctcatgctcagaataaatgggaaatggacccaagtgttgtatggtctgttgaaaccagaagtgtgactgtagttttcttcgtcatgcctcttttgtttatgtacaggatactttgttccattcatccatccatccattgtttcattggcaaaacggtgctattggctcatacatagcatgttcctactagcttggttttctgatatacttttttttttcaggtcggagattttggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctctgcgttggttgctcttgctggaacagcactggtgagtttttgttttatcctctccgaaaaggaacattgctgttctgaattgaatgcttattgtacccgcatgggcaggcattgtctttgggaaaagatccagggcattcttctttgattgaggtatgttgtttctgtttaagtggcttttatgttctaaacaccaccaaagccatcagcatccatccatattatctgatagaaatatacccgtttttactttcttttgaaggcaatccgattttctacacaacacgaaactagtctgtgatttgcttcgtattctaagccagcatggcaatcataagttcctaattgttagcttatttcattctctgctagtccacaatttccatgttaatattggtcctatgcaagtcactgttgatggcctaaagtaaaatcttgctcgcaccaataagcaataagcactttaggtttccaccttgttgctcgactgcactgacttatcatgatgacactttgaatgtaactgaggatgatgagagcgagacatcgaatgaatagtttgggcattggatggaattgcatcagctggatttaaactgttggcatttttgctaaatcacaaactgattagttgtttgaagtacacagatacctttaactagttacttccatctattggagggaagtaccaaaagcttaatttccatctatatttattggattgttgataaaattgcattatctgtttcccttgagtattgtcaatattgttcattagagctgatcctgtacccggtaaatgatgcttatacagggattcactgctggtggctttatttatattgctgttgctggagtcctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttccctgacaatgggaatgctggttgccctcggcatatctctagtagaatgatgacggaatttctggttgcagctttagggcctattgtacttaagccaagcgggtaattcttgaacagctccagcctgtaagatcaattcttctcgatagtttcaccgactgtgttacagaaattttgacaattttcaaaaaaaaaagagagagaaaatttggttcttaaacttcttaaaatatggttctgtttgcttaagcgcaattcatgccgacaagctgattagctgagctccgtcttctccgttttttctcagatttcagagaagctaaactgtaagtgaagcccttttttttaatatagggaagatgattatatcttcggtttctgctccacggatgcactcagccacagagtaaggtaaggcattcgagacaatgtttaatcaggtagctcggcacagtggcaccatctctaaagatttcattgttctccaagttcgaatgatggcaagaataacaagcatcactactcactagtagatatgagtacctcttacaataaaacacatccctgttggcatcaacggtagatgtgagtatgtgacccatgacagaattagtggtaagcactgaatggaaccatggaagtgctgcgttcatgggcgtctcaggctctgagtctgccatcttgattccagacatcgcctttctagtttttctagtttctgcactgctccaatagtaacttcccacatggaactgatcactgatgaagcagaccgttcggtaaatcgacggtggtcacccaccggcgtcaccggcaggctcgaccgggagatatgccgatggtcctcctcccccaccggttgatctacctcaggtacagtgctgtctcccaacacataaatgttgtgcaggggtagagagcccatggcagagaacggatatgaaggatctccaataattgcgtgtgtcgtcaggggggaggggggcaacagcaacatggtggtcacgttctcgtggatccaaaactcaaatataggtatagacgccaaaagaacaatgaaatgtgtccttcaaccttactctattttagcctcacttttttttaagtgcttagagcatctttaagagagttatcaaaattggctctcatatattcatataaagatcagtctctccataatactctctccatctctttcttcacactccaactgactccatcccactctccatgttctaatggacatatttataagggttatgatttaatccaaataagttgtaacagtaatggattgtagatgctttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0467400, RefSeq:Os08g0467400