Os08g0468100

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0468100| Description = Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)| Version = NM_001068541.1 GI:115476819 GeneID:4345795| Length = 5277 b...")
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Gene Name

Os08g0468100

Description

Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)

Version

NM_001068541.1 GI:115476819 GeneID:4345795

Length

5277 bp

Definition

Oryza sativa Japonica Group Os08g0468100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23121236..23126512

Sequence Coding Region

23121355..23122393,23122502..23122642,23124581..23124813,23124899..23126236

Expression

GEO Profiles:Os08g0468100

Genome Context

<gbrowseImage1> name=NC_008401:23121236..23126512 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23121236..23126512 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcttccgtgcagccgcggcagttcggccacctcgagccgggctccgcgccggtgcgcggcgccgcctcctcgaacggcgccaaggcgtaccctcccgcgaacggcatcccacgccgcgccgactcgccggtgcgcgggtgcggcttccctccgctcgtctcgccaccgccgcggaagccgcccagcgacgggtcggacgacgaggaggaggagcaggaggactggcgggagctgtacggctcgcacctgcagctggaggtggagccgccggtgcgcgacgcgcgcgacgagggcaccgccgacgcgtggatcgagcgcaacccgtcgctgatccggctcaccgggaagcacccgctgaactgcgagccgccgctggcgaggctcatgcaccacggcttcatcaccccggcggcgctgcactacgtgcgcaaccacggcgccgtgccgcggggtgactggtcgacgtggaccgtcgatgtgacggggctcgtcaagcggcccatgcggctcaccatggacgagctggtcaacggcttccccgccgtcgagatccccgtcacgctggtctgcgcgggcaaccgccgcaaggagcagaacatggtgcagcagacggtggggttcaactggggcgccgctggcgtgtctacgtcggtgtggcgcggcgcccgcctccgcgacgtgctccggcggtgcggcatcatgcccagcaagggcggcgcgctcaacgtgtgcttcgagggcgccgaggacctccccggcggcggcggctccaagtacggcaccagcatcacacgccagtgggcgctggacccgtcgcgggacatcatgctcgcctacatgcagaatggcgagccgctgctccccgaccacggcttccccgtccgcgccatcatccccggctgcatcggcggccgcatggtcaagtgggtcaagcgcatcatcgtcaccaccgccgagtccgacaactactaccattacaaggacaaccgcgtcctcccgtcccatgtcgacgccgagctcgccaacgccgatgcgtggtggtacaagccagagtacatcatcaacgagctgaacgtgaactcggtgatcacgacgcccgggcacgacgagatcctgcccatcaacggcatcaccacgcagcgcggctacaccatgaagggatacgcctactccggcggcggcaagaggatcacgcgggtggaggtgacgctggacggcggcgagacatggctggtgtgcgtgctggacctcccggagaagcccaccaagtacggcaagcactggtgctggtgcttctggtccgtcgaggtcgaggtgctcgacctcctcggcgccaaggagatcgccgtgcgcgcctgggaccagtcgcacaacacccagcccgagaagctcatctggaatctcatggggatgatgaacaactgctggttcaaggtgaaggtgaacgtgtgccggccgcacaagggtgagatcgggctggtgttcgagcacccgacgcagcccgggaaccagaccggcgggtggatggcgaggcagaagcacctggagacggcggaggcggccgcaccggggctgaagcggagcacgtcgacgccgttcatgaacaccaccgacggcaagcagtttaccatgtccgaggtgcgcaagcactcgtcgcaggactcggcgtggatcgtcgtccacggtcacgtctacgactgcacggccttcctcaaggaccaccccggcggcgccgacagcatcctcatcaacgccggcaccgactgcaccgaggagttcgacgccatccactccgacaaggccaaggcgctcctcgacacctaccgcatcggcgagctcatcaccaccggcgccgggtacagctccgacaactccgtccacggcgcgtccaacctctcccagctcgcccccatccgcgaggccatcaaggcgccggcgcccgtcgcgctctccagcccgcgcgacaaggtcccctgccaactcgtcgacaagaaggagctctcccgcgacgtccgcctcttccgcttcgcgctgccgtcctccgaccaggtgctcggcctccccgtcggcaagcacatcttcgtgtgcgccagcatcgaagggaagctgtgcatgcgggcgtacacgccgacgagcatggtcgacgaggtcggccacttcgacctcctcatcaaggtgtacttcaagaacgagcaccccaagttccccgatggcgggctcatgacgcagtacctggactcgctccccgtgggcgcctacatcgacgtcaaggggccactcggccacgtcgagtacaccggccgcggcgagttcgtcatcaacggcaagccgcggaacgcgcggcggctggcgatgatcgccggcgggagcgggatcacgcccatgtaccaggtcatccagtcggtgctgcgcgaccagccggaggacacgacggagatgcacctggtgtacgcgaaccggacggaggacgacatcctcctccgcgacgagctcgaccggtgggcggcggagtacccggacaggctcaaggtgtggtacgtcatcgaccaggtgaagcggccggaggaagggtggaagtacggcgtcgggttcgtcacggaggaggtgctgcgggagcacgtgccggagggcggcgacgacacgctcgcgctcgcctgcgggccgccgccgatgatcaagttcgccgtctcgccgaacctggagaagatgaagtacgacatggccaattctttcatcgtgttctaa</cdnaseq>

Protein Sequence

<aaseq>MAASVQPRQFGHLEPGSAPVRGAASSNGAKAYPPANGIPRRADS PVRGCGFPPLVSPPPRKPPSDGSDDEEEEQEDWRELYGSHLQLEVEPPVRDARDEGTA DAWIERNPSLIRLTGKHPLNCEPPLARLMHHGFITPAALHYVRNHGAVPRGDWSTWTV DVTGLVKRPMRLTMDELVNGFPAVEIPVTLVCAGNRRKEQNMVQQTVGFNWGAAGVST SVWRGARLRDVLRRCGIMPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRD IMLAYMQNGEPLLPDHGFPVRAIIPGCIGGRMVKWVKRIIVTTAESDNYYHYKDNRVL PSHVDAELANADAWWYKPEYIINELNVNSVITTPGHDEILPINGITTQRGYTMKGYAY SGGGKRITRVEVTLDGGETWLVCVLDLPEKPTKYGKHWCWCFWSVEVEVLDLLGAKEI AVRAWDQSHNTQPEKLIWNLMGMMNNCWFKVKVNVCRPHKGEIGLVFEHPTQPGNQTG GWMARQKHLETAEAAAPGLKRSTSTPFMNTTDGKQFTMSEVRKHSSQDSAWIVVHGHV YDCTAFLKDHPGGADSILINAGTDCTEEFDAIHSDKAKALLDTYRIGELITTGAGYSS DNSVHGASNLSQLAPIREAIKAPAPVALSSPRDKVPCQLVDKKELSRDVRLFRFALPS SDQVLGLPVGKHIFVCASIEGKLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDG GLMTQYLDSLPVGAYIDVKGPLGHVEYTGRGEFVINGKPRNARRLAMIAGGSGITPMY QVIQSVLRDQPEDTTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRP EEGWKYGVGFVTEEVLREHVPEGGDDTLALACGPPPMIKFAVSPNLEKMKYDMANSFI VF</aaseq>

Gene Sequence

<dnaseqindica>120..1158#1267..1407#3346..3578#3664..5001#acctatcccagcgcctcttccaggccactacttctctgggctctgggcctctggctgctcatcaacggcggccggcgtagcgagcgagctgagctgaacgctagaaccgagcactaaacatggctgcttccgtgcagccgcggcagttcggccacctcgagccgggctccgcgccggtgcgcggcgccgcctcctcgaacggcgccaaggcgtaccctcccgcgaacggcatcccacgccgcgccgactcgccggtgcgcgggtgcggcttccctccgctcgtctcgccaccgccgcggaagccgcccagcgacgggtcggacgacgaggaggaggagcaggaggactggcgggagctgtacggctcgcacctgcagctggaggtggagccgccggtgcgcgacgcgcgcgacgagggcaccgccgacgcgtggatcgagcgcaacccgtcgctgatccggctcaccgggaagcacccgctgaactgcgagccgccgctggcgaggctcatgcaccacggcttcatcaccccggcggcgctgcactacgtgcgcaaccacggcgccgtgccgcggggtgactggtcgacgtggaccgtcgatgtgacggggctcgtcaagcggcccatgcggctcaccatggacgagctggtcaacggcttccccgccgtcgagatccccgtcacgctggtctgcgcgggcaaccgccgcaaggagcagaacatggtgcagcagacggtggggttcaactggggcgccgctggcgtgtctacgtcggtgtggcgcggcgcccgcctccgcgacgtgctccggcggtgcggcatcatgcccagcaagggcggcgcgctcaacgtgtgcttcgagggcgccgaggacctccccggcggcggcggctccaagtacggcaccagcatcacacgccagtgggcgctggacccgtcgcgggacatcatgctcgcctacatgcagaatggcgagccgctgctccccgaccacggcttccccgtccgcgccatcatccccggctgcatcggcggccgcatggtcaagtgggtcaagcgcatcatcgtcaccaccgccgagtccgacaactactaccattacaaggacaaccgcgtcctcccgtcccatgtcgacgccgagctcgccaacgccgatggtaacgtatttaccattcattcatgcatgtgtaaaacacattttaccgttcatgcgaatatgtatgtactgagttgagttctgactcgatcgaacaaatgctcatcagcgtggtggtacaagccagagtacatcatcaacgagctgaacgtgaactcggtgatcacgacgcccgggcacgacgagatcctgcccatcaacggcatcaccacgcagcgcggctacaccatgaagggatacgcctactccggtgagcacgcactcctccataacttctctctgaatcgctcgccttaatttactctcggtcgcagtggcttgtcattttgcaccatccttttgtgtttgaccttgattaatttaacttgtagtaaacaatgttacttaggtggcctgaaaaatctctagtgcttttcggaaacttactctcaacgtagtagtatgccactttgcaaagtgaatagtggtaatcaaatccaacaaatatcttctgaattttctgacagaataataccccatcagcatatggactacatatcttagctaaagtactggtaataaaataacaccttggccaccagttagtcatttgtcaaagttgaacatgccttgcaaatacggctagtggtatcgtaaagggtcatttaatttgcaaagaggaccccattcaaaagaacagatattaattcagggacctgtatttcaatacatctccttgtgcagacaattcttcagaaacatataacagttcattgaataaaaacctctcactgaagctagcttgcactaaaaaatacatctagcatatacatggagcctgtatctaggtaactctctttgtctgaacacttcacaatcgactgccgattattaaagctaagaaagtagagtgatttcagatatccaatcagacagacaaattaaaccaattcaaatagccaagtaggaaccattctatgattatcattacatttcactagcactgaccatacataatataaagataagcgtagtggtggtagcagcagctcggaaaccgggtgcgtgataccatttgaagttggatagtttctgcacttttctgccaaagaaagcgaataaagctggcgaagttggcacttcgtggcctccaaagggtagtgagccagtacagtactgtgtactgtatagtgtctcaagagccaaatgcacccacgttttttgtctgaacctgtggcaagccaaggttggacctggtgccggttaggcgaaacataggacaaaacccgatccatttcgtggtcaaaaacagctgcaattcgtgtggccaatctcagctgcaagaaagatttttcctatatcaatatggagcagtactagtatatacttggtactagcttaaatttccgtatattaacagaaggcatgcattagtacttgggtagtaattagacgcgtgtaaatagacattttgtgtgcaaaagggacctatcatgcatgatgattgaccttatggtcaccaatgatgctactatcatcagtactctcattggactaacctaaaagttattaaggataagtgcgactaaacacagtaagagagccatcatctggcatccaaccttgtagtcctccggcgatgttggaagccaaattatattactcggccaattatattactcggccaaattatattaacaacttaagaacaagttggcttgcttcgtgtcggaagctgttgggattgtcccagctggaacccggcagcaacatggacactgaatatccattctggtggcgaaacgtgtcgaatcttgctaacagtaaatggtaattaaggggcagtgaatagggaatcaccaaagtttggtggggtggagtgagttatgagtttttgtgtagggtaatgcttaagaagatttattttagataatggatagaaatttggcctctatatcattcttaagaaatatatcgagatataccgtatttttctaatataaaatttgatactttcaagtactacatatttcgagctatcaaaatttttgttgtaagatttaagtacccaaggtattttttctaagtactgtaaaattttcattgtttaacaaaaagaaaatgaagggtcttcaaaaaagaaattgaaggcgcagggaatgatggagcgatgggcctgatggtgatctttgtctctgtggtttggtaggcggcggcaagaggatcacgcgggtggaggtgacgctggacggcggcgagacatggctggtgtgcgtgctggacctcccggagaagcccaccaagtacggcaagcactggtgctggtgcttctggtccgtcgaggtcgaggtgctcgacctcctcggcgccaaggagatcgccgtgcgcgcctgggaccagtcgcacaacacccagcccgagaagctcatctggaatctcatggtaggtgcttcattccgtctccggccaaggcgacggcgatgtagacgacgatggcaaattcattcgatcggttgggtttttgcaggggatgatgaacaactgctggttcaaggtgaaggtgaacgtgtgccggccgcacaagggtgagatcgggctggtgttcgagcacccgacgcagcccgggaaccagaccggcgggtggatggcgaggcagaagcacctggagacggcggaggcggccgcaccggggctgaagcggagcacgtcgacgccgttcatgaacaccaccgacggcaagcagtttaccatgtccgaggtgcgcaagcactcgtcgcaggactcggcgtggatcgtcgtccacggtcacgtctacgactgcacggccttcctcaaggaccaccccggcggcgccgacagcatcctcatcaacgccggcaccgactgcaccgaggagttcgacgccatccactccgacaaggccaaggcgctcctcgacacctaccgcatcggcgagctcatcaccaccggcgccgggtacagctccgacaactccgtccacggcgcgtccaacctctcccagctcgcccccatccgcgaggccatcaaggcgccggcgcccgtcgcgctctccagcccgcgcgacaaggtcccctgccaactcgtcgacaagaaggagctctcccgcgacgtccgcctcttccgcttcgcgctgccgtcctccgaccaggtgctcggcctccccgtcggcaagcacatcttcgtgtgcgccagcatcgaagggaagctgtgcatgcgggcgtacacgccgacgagcatggtcgacgaggtcggccacttcgacctcctcatcaaggtgtacttcaagaacgagcaccccaagttccccgatggcgggctcatgacgcagtacctggactcgctccccgtgggcgcctacatcgacgtcaaggggccactcggccacgtcgagtacaccggccgcggcgagttcgtcatcaacggcaagccgcggaacgcgcggcggctggcgatgatcgccggcgggagcgggatcacgcccatgtaccaggtcatccagtcggtgctgcgcgaccagccggaggacacgacggagatgcacctggtgtacgcgaaccggacggaggacgacatcctcctccgcgacgagctcgaccggtgggcggcggagtacccggacaggctcaaggtgtggtacgtcatcgaccaggtgaagcggccggaggaagggtggaagtacggcgtcgggttcgtcacggaggaggtgctgcgggagcacgtgccggagggcggcgacgacacgctcgcgctcgcctgcgggccgccgccgatgatcaagttcgccgtctcgccgaacctggagaagatgaagtacgacatggccaattctttcatcgtgttctaaactcctactactaaattatacgcaccgcattaattattttggtatacgtacgacgatgtatatacgtgtcgtgccaattagaaacgaaatgctgcatgcatgcgtatgcaagatgagagaaaaaaaaacaatatctaagttgtagtagtgtactcttgataatatcctagagtacatactgcatacataggccatgatttccctttctaagaggctagcggttgattccttcctgtatactagtagcttgtaattaccaataactgtattgttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0468100, RefSeq:Os08g0468100