Os08g0469000

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0469000| Description = Peptidase A1, pepsin family protein| Version = NM_001068545.1 GI:115476827 GeneID:4345799| Length = 1347 bp| Defini...")
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Gene Name

Os08g0469000

Description

Peptidase A1, pepsin family protein

Version

NM_001068545.1 GI:115476827 GeneID:4345799

Length

1347 bp

Definition

Oryza sativa Japonica Group Os08g0469000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23153640..23154986

Sequence Coding Region

23153640..23154986

Expression

GEO Profiles:Os08g0469000

Genome Context

<gbrowseImage1> name=NC_008401:23153640..23154986 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23153640..23154986 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaagtccagtgttggtgctggctctcgttgcggcgacgctattgccggcctcacattgcagcgtcagcggcgtcggtttccagctcaaactccgacacgtcgacgcacacggcagctacaccaagctggagcttgtcacccgcgccatccgccggagcagagcccgcgtggcggcgctgcaggccgtcgccgccgcggcggcgacggtggcgcccgtggtggacccgatcaccgcggcgaggatactggtggcggcgagccagggggagtacctgatggacctcgccatcggcacgccgccgctgcgctacacggccatggtggacaccggcagcgacctcatctggacgcagtgcgcgccgtgcgtgctctgcgccgaccagcccacgccctacttccggccggcgaggtccgccacgtaccggctcgtgccgtgccggtcgccgctgtgcgccgcgctgccgtaccctgcatgcttccagagatcagtgtgcgtgtaccagtactactacggcgacgaggcgtccaccgccggcgtcctcgccagcgagaccttcacgttcggcgcggccaactcgagcaaggtcatggtgtccgacgtcgcgttcggctgcggcaacatcaactcgggccagctcgccaacagctccggcatggtcggcctcggccgcgggccgctgtcgctggtgagccagctcggcccgtcgaggttctcctactgcctcacgtcgttcctctcgccggagccgagccggctcaacttcggcgtgttcgcgacgctcaacggcaccaacgcaagctcctccggctcgccggtgcagtccacgccgctggtcgtcaacgcggcgctgccgtccctctacttcatgtccctcaagggcatcagcctcggccagaagcggctgcccatcgacccgctggtgttcgccatcaacgacgacggcacgggcggcgtcttcatcgactccggcacgtcgctcacctggctccagcaggacgcgtacgacgccgtgcgccgcgagctggtgtccgtcctccggccgctgccgccgacgaacgacaccgagatcggcctggagacgtgcttcccgtggccgccgccgccgagcgtggccgtgacggtcccggacatggagctccacttcgacggcggcgccaacatgaccgtgccgccggagaactacatgctgatcgacggcgccaccgggttcctgtgcctggcgatgatccgctccggcgacgccaccatcatcggcaactaccagcagcagaacatgcacattttgtacgacatcgcgaatagcctcttgtcgttcgtgccggcgccgtgcaacatcgtgtag</cdnaseq>

Protein Sequence

<aaseq>MASPVLVLALVAATLLPASHCSVSGVGFQLKLRHVDAHGSYTKL ELVTRAIRRSRARVAALQAVAAAAATVAPVVDPITAARILVAASQGEYLMDLAIGTPP LRYTAMVDTGSDLIWTQCAPCVLCADQPTPYFRPARSATYRLVPCRSPLCAALPYPAC FQRSVCVYQYYYGDEASTAGVLASETFTFGAANSSKVMVSDVAFGCGNINSGQLANSS GMVGLGRGPLSLVSQLGPSRFSYCLTSFLSPEPSRLNFGVFATLNGTNASSSGSPVQS TPLVVNAALPSLYFMSLKGISLGQKRLPIDPLVFAINDDGTGGVFIDSGTSLTWLQQD AYDAVRRELVSVLRPLPPTNDTEIGLETCFPWPPPPSVAVTVPDMELHFDGGANMTVP PENYMLIDGATGFLCLAMIRSGDATIIGNYQQQNMHILYDIANSLLSFVPAPCNIV</aaseq>

Gene Sequence

<dnaseqindica>1..1347#atggcaagtccagtgttggtgctggctctcgttgcggcgacgctattgccggcctcacattgcagcgtcagcggcgtcggtttccagctcaaactccgacacgtcgacgcacacggcagctacaccaagctggagcttgtcacccgcgccatccgccggagcagagcccgcgtggcggcgctgcaggccgtcgccgccgcggcggcgacggtggcgcccgtggtggacccgatcaccgcggcgaggatactggtggcggcgagccagggggagtacctgatggacctcgccatcggcacgccgccgctgcgctacacggccatggtggacaccggcagcgacctcatctggacgcagtgcgcgccgtgcgtgctctgcgccgaccagcccacgccctacttccggccggcgaggtccgccacgtaccggctcgtgccgtgccggtcgccgctgtgcgccgcgctgccgtaccctgcatgcttccagagatcagtgtgcgtgtaccagtactactacggcgacgaggcgtccaccgccggcgtcctcgccagcgagaccttcacgttcggcgcggccaactcgagcaaggtcatggtgtccgacgtcgcgttcggctgcggcaacatcaactcgggccagctcgccaacagctccggcatggtcggcctcggccgcgggccgctgtcgctggtgagccagctcggcccgtcgaggttctcctactgcctcacgtcgttcctctcgccggagccgagccggctcaacttcggcgtgttcgcgacgctcaacggcaccaacgcaagctcctccggctcgccggtgcagtccacgccgctggtcgtcaacgcggcgctgccgtccctctacttcatgtccctcaagggcatcagcctcggccagaagcggctgcccatcgacccgctggtgttcgccatcaacgacgacggcacgggcggcgtcttcatcgactccggcacgtcgctcacctggctccagcaggacgcgtacgacgccgtgcgccgcgagctggtgtccgtcctccggccgctgccgccgacgaacgacaccgagatcggcctggagacgtgcttcccgtggccgccgccgccgagcgtggccgtgacggtcccggacatggagctccacttcgacggcggcgccaacatgaccgtgccgccggagaactacatgctgatcgacggcgccaccgggttcctgtgcctggcgatgatccgctccggcgacgccaccatcatcggcaactaccagcagcagaacatgcacattttgtacgacatcgcgaatagcctcttgtcgttcgtgccggcgccgtgcaacatcgtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0469000, RefSeq:Os08g0469000