Os08g0469100

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0469100| Description = Peptidase A1, pepsin family protein| Version = NM_001068546.1 GI:115476829 GeneID:4345800| Length = 1298 bp| Defini...")
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Gene Name

Os08g0469100

Description

Peptidase A1, pepsin family protein

Version

NM_001068546.1 GI:115476829 GeneID:4345800

Length

1298 bp

Definition

Oryza sativa Japonica Group Os08g0469100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23157309..23158606

Sequence Coding Region

23157311..23158432

Expression

GEO Profiles:Os08g0469100

Genome Context

<gbrowseImage1> name=NC_008401:23157309..23158606 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23157309..23158606 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgataaaaagttgcttcaataatattttgctcagcgaccagggacactcgctgaccgtcggcatcgtgcagccgcgcaagctcatcgtggacaccggcagcgacctcatctggacgcagtgcaagctgtcctcctccaccgccgcggcggcgaggcacggctcgccgccggtctacgaccccggcgagtcctccactttcgccttcctcccctgcagcgacaggctgtgccaggaggggcagttcagcttcaagaactgcaccagcaagaacaggtgcgtctacgaggacgtgtacggcagcgcggcggccgtcggcgtcctcgcgtcggagaccttcaccttcggcgcgcgccgcgccgtctccctccgcctcggcttcggctgcggcgcgctctccgccggaagcctcatcggcgccaccggcatcctggggcttagcccggagagcttgtccctcatcacgcagctgaaaatacagagattctcctactgcctcacccctttcgccgacaagaagacgagcccgttgctgttcggcgcaatggccgacctgtccaggcacaagacgacgaggccgatccaaaccaccgcgatagtgagcaatccggtggagaccgtctactactacgtgccgctggttggcatctcgctcgggcacaagcggctcgccgtgccggcggcgagcctcgcaatgaggcccgacggcggcggcggcacgatcgtcgactctggcagcacggtggcgtacctcgtggaggcggcgttcgaggccgtcaaggaggccgtgatggacgtggtgaggctgccggtggcgaaccggaccgtcgaggactacgagctctgcttcgtgctgccgcgccgcacggctgcggcggcgatggaggcggtgcaggttccgccgctggtgctgcacttcgacggcggcgcggcgatggtgctgccgcgggacaactacttccaggagccgagagccgggctgatgtgcctggccgtgggcaagacgacggacggctccggcgtgtccatcatcggcaacgtccagcagcagaacatgcacgtactcttcgatgtgcaacaccacaagttctcctttgcgcccacgcagtgtgatcaaatctga</cdnaseq>

Protein Sequence

<aaseq>MIKSCFNNILLSDQGHSLTVGIVQPRKLIVDTGSDLIWTQCKLS SSTAAAARHGSPPVYDPGESSTFAFLPCSDRLCQEGQFSFKNCTSKNRCVYEDVYGSA AAVGVLASETFTFGARRAVSLRLGFGCGALSAGSLIGATGILGLSPESLSLITQLKIQ RFSYCLTPFADKKTSPLLFGAMADLSRHKTTRPIQTTAIVSNPVETVYYYVPLVGISL GHKRLAVPAASLAMRPDGGGGTIVDSGSTVAYLVEAAFEAVKEAVMDVVRLPVANRTV EDYELCFVLPRRTAAAAMEAVQVPPLVLHFDGGAAMVLPRDNYFQEPRAGLMCLAVGK TTDGSGVSIIGNVQQQNMHVLFDVQHHKFSFAPTQCDQI</aaseq>

Gene Sequence

<dnaseqindica>3..1124#gaatgataaaaagttgcttcaataatattttgctcagcgaccagggacactcgctgaccgtcggcatcgtgcagccgcgcaagctcatcgtggacaccggcagcgacctcatctggacgcagtgcaagctgtcctcctccaccgccgcggcggcgaggcacggctcgccgccggtctacgaccccggcgagtcctccactttcgccttcctcccctgcagcgacaggctgtgccaggaggggcagttcagcttcaagaactgcaccagcaagaacaggtgcgtctacgaggacgtgtacggcagcgcggcggccgtcggcgtcctcgcgtcggagaccttcaccttcggcgcgcgccgcgccgtctccctccgcctcggcttcggctgcggcgcgctctccgccggaagcctcatcggcgccaccggcatcctggggcttagcccggagagcttgtccctcatcacgcagctgaaaatacagagattctcctactgcctcacccctttcgccgacaagaagacgagcccgttgctgttcggcgcaatggccgacctgtccaggcacaagacgacgaggccgatccaaaccaccgcgatagtgagcaatccggtggagaccgtctactactacgtgccgctggttggcatctcgctcgggcacaagcggctcgccgtgccggcggcgagcctcgcaatgaggcccgacggcggcggcggcacgatcgtcgactctggcagcacggtggcgtacctcgtggaggcggcgttcgaggccgtcaaggaggccgtgatggacgtggtgaggctgccggtggcgaaccggaccgtcgaggactacgagctctgcttcgtgctgccgcgccgcacggctgcggcggcgatggaggcggtgcaggttccgccgctggtgctgcacttcgacggcggcgcggcgatggtgctgccgcgggacaactacttccaggagccgagagccgggctgatgtgcctggccgtgggcaagacgacggacggctccggcgtgtccatcatcggcaacgtccagcagcagaacatgcacgtactcttcgatgtgcaacaccacaagttctcctttgcgcccacgcagtgtgatcaaatctgaaacactcttactactaacacagttgttcttacaattttcccttttatttttccctgaaaatgttattagccttccggattaagatatccaataataaaaaggattcatcgatcaagtattgacgtttcgaaacgacaaaagagaataagaggaaatgcaccacagatgtatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0469100, RefSeq:Os08g0469100