Os08g0473300

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0473300| Description = Conserved hypothetical protein| Version = NM_001068557.2 GI:297608720 GeneID:4345811| Length = 3234 bp| Definition ...")
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Gene Name

Os08g0473300

Description

Conserved hypothetical protein

Version

NM_001068557.2 GI:297608720 GeneID:4345811

Length

3234 bp

Definition

Oryza sativa Japonica Group Os08g0473300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23395243..23398476

Sequence Coding Region

23395243..23395455,23395602..23395767,23396037..23396290,23396375..23396587,23396661..23396753
,23396856..23396957,23398099..23398476

Expression

GEO Profiles:Os08g0473300

Genome Context

<gbrowseImage1> name=NC_008401:23395243..23398476 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23395243..23398476 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaacttggcatcaaagacatagctgccactattaaacatatcgaaacacaacatgcatcttcaaagacaaaaaactcaggcaccaagaaaagtcatggagaaggttctgatacatcagagtttctccctgaagatgatgaacaaggggttcagtgtgatgatgattcatatttagaaccggagcagcccgtccccataatgattgagtaccctcgacaaactagacgaaagaagtgtgcgacgaagaagaaacctaccctcaagatgccaccaggagtaaggatatcaaagagagtgagggcgggtgctccaaccgaaatgcctcctggagtctcaacaaggtcagcgaaaaggcaactcatagcagaacaagtacctatacgaagaggcacaagaaaatcaaggccaccaactgcaggaataatgcttgacaagatgaccaaagctatgggaagaatgcccattgctgttgccgaagggaagaaaaggccagatgaaccggtgcaagctgccaagtttgcatcagaggctggtgttatcattaggactaaagttcctgtcttccctcattggaagaagtacaaggatgatgaaggctatattaacaacttcatgggcaagttatctgtcaggttggccattaaccaaaaacaccagccaacaagggatgcttgtgctgatgtatggcagaaagggatacgacaaacacggtataatttgaagaaggcctacttcaatggagtacctgctaacgagattagaactacctctcccataagtagcatgactgatgaacagtggctggaacttgttgcaaagtggtcaaatccaaagaatatgcaaatctctgaacagaacaagcaaaaccggcttaatgttaggttccatcaggctacgggatctcgcagctatgctgcacacttgcacgcttacaaggagaagaacaaggttgtagagcttgatgctgtggatgcctttgaggactgccataccagtagggaaaaaggtctaagtgatgctgccaaagatgcaatttcaagtatgaaagctattatggaagaacctgtacctgatggtgagacaccaagaactagtgcagaagttgtgtccaaggttctctctcgggacaactccaataccacgtttttgaaaaatgctggtctgcagatgagctccaagaaatcagtgacaccgacagaagcagcacttcaggaagaacttgcagctgaaaagcaaagttcagccattctccatgcagaagttgtcgaactaaaagaacaagcaaatcttgcaaatgaagcactggcaaagactcaaaaggagttggcagagttcaagcagcagcaggaagagaacaatttgctccttcgacgtatcttgagcctttcccagggtaacttaaatctatcctag</cdnaseq>

Protein Sequence

<aaseq>MDELGIKDIAATIKHIETQHASSKTKNSGTKKSHGEGSDTSEFL PEDDEQGVQCDDDSYLEPEQPVPIMIEYPRQTRRKKCATKKKPTLKMPPGVRISKRVR AGAPTEMPPGVSTRSAKRQLIAEQVPIRRGTRKSRPPTAGIMLDKMTKAMGRMPIAVA EGKKRPDEPVQAAKFASEAGVIIRTKVPVFPHWKKYKDDEGYINNFMGKLSVRLAINQ KHQPTRDACADVWQKGIRQTRYNLKKAYFNGVPANEIRTTSPISSMTDEQWLELVAKW SNPKNMQISEQNKQNRLNVRFHQATGSRSYAAHLHAYKEKNKVVELDAVDAFEDCHTS REKGLSDAAKDAISSMKAIMEEPVPDGETPRTSAEVVSKVLSRDNSNTTFLKNAGLQM SSKKSVTPTEAALQEELAAEKQSSAILHAEVVELKEQANLANEALAKTQKELAEFKQQ QEENNLLLRRILSLSQGNLNLS</aaseq>

Gene Sequence

<dnaseqindica>1..213#360..525#795..1048#1133..1345#1419..1511#1614..1715#2857..3234#atggatgaacttggcatcaaagacatagctgccactattaaacatatcgaaacacaacatgcatcttcaaagacaaaaaactcaggcaccaagaaaagtcatggagaaggttctgatacatcagagtttctccctgaagatgatgaacaaggggttcagtgtgatgatgattcatatttagaaccggagcagcccgtccccataatgattgaggtgcttcttctatcttggctgtggggggggagctaggatatctgcaataatttttccgcatttaatttgtgcagcatttgattatttttttaatgattgttgctaatttattcacatgcttacaacttttgtgtttattattgtagtaccctcgacaaactagacgaaagaagtgtgcgacgaagaagaaacctaccctcaagatgccaccaggagtaaggatatcaaagagagtgagggcgggtgctccaaccgaaatgcctcctggagtctcaacaaggtcagcgaaaaggcaactcatagcagaacaaggtaaaggtaatggccatgaagaactgcctccagaaacaaaaaacaatggtgatgaagatgtgggcagtggacatttgcttcaagataatgatgtgaacaggcccccgagcccggtgatggactggtcatatggacatgatgccaaccatgaagagcaacctgcacagcaaaccaattctgatgttgaaggccagttagttcaacgaagagaaatttattattttttaactatttgatgaatgctaacattgtaattgaatactctgtagtacctatacgaagaggcacaagaaaatcaaggccaccaactgcaggaataatgcttgacaagatgaccaaagctatgggaagaatgcccattgctgttgccgaagggaagaaaaggccagatgaaccggtgcaagctgccaagtttgcatcagaggctggtgttatcattaggactaaagttcctgtcttccctcattggaagaagtacaaggatgatgaaggctatattaacaacttcatgggcaagttatctgtaagagcctatctatattcttttatatttcatctattatatgacctagtgttactccttaatgattgcaattcaaaccatcaggtcaggttggccattaaccaaaaacaccagccaacaagggatgcttgtgctgatgtatggcagaaagggatacgacaaacacggtataatttgaagaaggcctacttcaatggagtacctgctaacgagattagaactacctctcccataagtagcatgactgatgaacagtggctggaacttgttgcaaagtggtcaaatccaaagaatatggtatgtcatctctaatgacatatttgtttcattttatacctgcgactatgtctaacacatacatcttttgtagcaaatctctgaacagaacaagcaaaaccggcttaatgttaggttccatcaggctacgggatctcgcagctatgctgcacacttgcacgcttacgtaagttcccattatcttttagcattaattgtagttaagaaccacttatctaatgtaatagatatataaaataattgatctgcattttctgtattgaaatagaaggagaagaacaaggttgtagagcttgatgctgtggatgcctttgaggactgccataccagtagggaaaaaggtctaagtgatgctgccaaagatgcaattgtaagtcactttgtatattcttacaacattgaactcaattccttgatacctatgccaacatattattaattcagctcattttatatttacatccataggataatttctgtccttagtgtgcagagatatttgcagctaagatcattacagacttaatggaatttatagactctaacaatgttagaatacataccaaactaaatttgtagctggaaacttgtcgctagacaacttaccatatacaacataagttgagattgggttaaaatgccaaataagctacataaacattttttcatcaattgatcctggttgcagtttgtatttttatcaatatcccgggtttgagggtgtgattcatgaaaactcatttttacctaagctgctgtagtggtgtttgcatgtattgaggttttgaatcatatgaacataagactgaatatatttcagcctttactacttcaaaacttatttcattgtaacttgcaaaagtaaacttaattgtgagggattatgtactccacactagtattttctttctaaacattagtggtttctagggaaaatatttaggcatcataggaggaatagaaaataaccaacgctaagtaacattgcaccccctccaaattttatgaaagtagttgaggggaaaaccttgttcttttatagctaccagggtgttccatcaatcaaaagctgccatgaaagttaatcaaatatagtctaaagtcagccttctgatatatgctaaaacagtatcctagattctgtcaagaagcatttggcctgcattgttgctagaggctagatagaaaataattacattctaccatagttagagctcaaaatgtttctggtctctttcacagttaagagggcaatgcaatatttctaaatatgggaatgcttggcttactcatataatttgtttctgttttggcttatggaaaacaaatttggttaaatttgcattctatacaagtttccttacctctagtttgtgcttcctggtagctttccatcagttttcagtgactttttgaatgtgttgtgcaactgccagtattttgaatgtgttatgcagcagccagtttttcatgtatctaatttcatagctaatgttcaatcattgctgcagtcaagtatgaaagctattatggaagaacctgtacctgatggtgagacaccaagaactagtgcagaagttgtgtccaaggttctctctcgggacaactccaataccacgtttttgaaaaatgctggtctgcagatgagctccaagaaatcagtgacaccgacagaagcagcacttcaggaagaacttgcagctgaaaagcaaagttcagccattctccatgcagaagttgtcgaactaaaagaacaagcaaatcttgcaaatgaagcactggcaaagactcaaaaggagttggcagagttcaagcagcagcaggaagagaacaatttgctccttcgacgtatcttgagcctttcccagggtaacttaaatctatcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0473300, RefSeq:Os08g0473300