Os08g0474500

From RiceWiki
Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0474500| Description = Conserved hypothetical protein| Version = NM_001068563.1 GI:115476863 GeneID:4345817| Length = 1004 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0474500

Description

Conserved hypothetical protein

Version

NM_001068563.1 GI:115476863 GeneID:4345817

Length

1004 bp

Definition

Oryza sativa Japonica Group Os08g0474500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23472713..23473716

Sequence Coding Region

23472868..23473611

Expression

GEO Profiles:Os08g0474500

Genome Context

<gbrowseImage1> name=NC_008401:23472713..23473716 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23472713..23473716 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccagtccagtccgccgcgtcggcagcgacctcagcagcggcatctactcagcagctgcaagccacggccaccagcagcaaaccacgagtgacaacggccacgggtcagccaacgacgacgacgacgacgacgacgttgccaaggcgaagcagaggctctcgtcgcttctcttctccggcgtcggcacgtggcggagaagcgtggacggcagcggcggcgacagcaagcggcaggtgaaggggaacagcagccgaggaggaggaggtgggctggacattgcgcagctggtgaagaagtacgcgtccatggtggagcgtctcttcttcgcgtcgtccttgtccaataatcgccgccgtggcggcggggatcagagcgggaggaggacggagctgcggcggaggcggcactcgttcatcatctccggccttcgtcgcggcgccgccgccgccgctgccgccccgtcgaagcgtcacgaggggagctggctgttctcggcgcccgcgtcgctgcgcgggtcgccggtggccagcgggcacctgtcggtgaaggtgtcgacgtcgtcggaggagagcacgatggaggagctgcacagcgccgtccaggccgccatcgcgcactgcaagaactccatcgccgccgccgcgccaagcagcaggccggcggcggcggcggcggcgaccacgccgaccggtgtaaatgctgacgcggtggtggcgtgtacgtcttctcgtgcgtcgtaa</cdnaseq>

Protein Sequence

<aaseq>MSSPVRRVGSDLSSGIYSAAASHGHQQQTTSDNGHGSANDDDDD DDVAKAKQRLSSLLFSGVGTWRRSVDGSGGDSKRQVKGNSSRGGGGGLDIAQLVKKYA SMVERLFFASSLSNNRRRGGGDQSGRRTELRRRRHSFIISGLRRGAAAAAAAPSKRHE GSWLFSAPASLRGSPVASGHLSVKVSTSSEESTMEELHSAVQAAIAHCKNSIAAAAPS SRPAAAAAATTPTGVNADAVVACTSSRAS</aaseq>

Gene Sequence

<dnaseqindica>106..849#aacaatttcacaaccatctttccatctccacccagccaatttccctcccccaccgccagcaacgtcgagccctctgccttcccggcgacgagtgcgtgtgccggcatgtccagtccagtccgccgcgtcggcagcgacctcagcagcggcatctactcagcagctgcaagccacggccaccagcagcaaaccacgagtgacaacggccacgggtcagccaacgacgacgacgacgacgacgacgttgccaaggcgaagcagaggctctcgtcgcttctcttctccggcgtcggcacgtggcggagaagcgtggacggcagcggcggcgacagcaagcggcaggtgaaggggaacagcagccgaggaggaggaggtgggctggacattgcgcagctggtgaagaagtacgcgtccatggtggagcgtctcttcttcgcgtcgtccttgtccaataatcgccgccgtggcggcggggatcagagcgggaggaggacggagctgcggcggaggcggcactcgttcatcatctccggccttcgtcgcggcgccgccgccgccgctgccgccccgtcgaagcgtcacgaggggagctggctgttctcggcgcccgcgtcgctgcgcgggtcgccggtggccagcgggcacctgtcggtgaaggtgtcgacgtcgtcggaggagagcacgatggaggagctgcacagcgccgtccaggccgccatcgcgcactgcaagaactccatcgccgccgccgcgccaagcagcaggccggcggcggcggcggcggcgaccacgccgaccggtgtaaatgctgacgcggtggtggcgtgtacgtcttctcgtgcgtcgtaactgcaccaatgtaatgtacctgttcgtgttctcggttcgatctatttcctgtgcgtaagttaatggcgacaattaatattagtccgaaaatacgagtgtattgttgactaattaatttgaaatgttagttatcgatcaatcggccgattggatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0474500, RefSeq:Os08g0474500