Os08g0478200

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Revision as of 13:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0478200| Description = Similar to ATP synthase D chain, mitochondrial (EC 3.6.3.14)| Version = NM_001068585.1 GI:115476907 GeneID:4345839| ...")
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Gene Name

Os08g0478200

Description

Similar to ATP synthase D chain, mitochondrial (EC 3.6.3.14)

Version

NM_001068585.1 GI:115476907 GeneID:4345839

Length

2850 bp

Definition

Oryza sativa Japonica Group Os08g0478200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23667301..23670150

Sequence Coding Region

23667603..23667704,23667828..23667914,23668069..23668133,23669126..23669207,23669866..23670039

Expression

GEO Profiles:Os08g0478200

Genome Context

<gbrowseImage1> name=NC_008401:23667301..23670150 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23667301..23670150 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgggaacggcgtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatggccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttcgaggacgtcaaccaccagctccagaccaagttctctcaggagccccaaccgattgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaagcttatgaaagcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgatgcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtcagagaggatagagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatgacagcagatgaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatccgtaacgacaactggggctactga</cdnaseq>

Protein Sequence

<aaseq>MSGNGVKKVAEVAAKAGKAIDWEGMAKMLVSDEARKEFNTLRRT FEDVNHQLQTKFSQEPQPIDWEYYRKGIGSKVVDMYKEAYESIEIPKYVDTVTPQYKP KFDALLVELKEAEKESLKESERIEKELAELQEMKKNISTMTADEYFAKHPEVKQKFDD EIRNDNWGY</aaseq>

Gene Sequence

<dnaseqindica>2447..2548#2237..2323#2018..2082#944..1025#112..285#tttctctctcccgtgtggtcggagctcactgcagcggcggcggcggcggcgaacgaggggggagagagagaggtcgaggtagagaggaaagggagaggagggcggaggaagatgagcgggaacggcgtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatggccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttcgaggacgtcaaccaccagctccagaccaagttctctcaggtattcaccacccccccccccaccccacacccgccgccgccggatcggacctagggtttccggatctggggggcatcctcccgtatccgatccttctgatcttgtattgaatgcgaagatcccatggtgagatgttagtggaatcgatccatttagttgggtatattctgtattcgtgtgcgttgtaataattttgttggcatgttgatattcagttagatttggactttaccaatatacatcggagataggttaacccatacaaatgtagtcgtcgttatgccaacattctcacatcgttggtgcttacgatcatcagcataagaacgttgttaattatggacatctttattccgttcaccgcgtttgcgcgtttggatttttattatagtctacagactacgttcgatcaccaaggatctgtattgtctttgtggctaataagattaatatggtttgaattaaaatgatcctttgtcttgtcaaattgatgccgtcatgttcctttggtacttttaccttgaaaaatgcctggaagaatctagaactcttggatgcatgcattttctcttgatttgcagcatgcgttttctcaatgctgttaatttctgaggtcccgtattatgtttctaaaagtttctctcttttgacactgcaggagccccaaccgattgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaagcttatgaaagtaagcattttaggccctgtttagattccaacttttttcttcaaacttccaatttttccgtcacatcgaactttcctacacacacaaacttccaactttttcgtcacatcgttccaatttcttcaaacttccaattttggcgtggaactaaacacggccttactcttcaaacatatcccgtctttcaaggaagtagggttaaatttgagtgtgcttttctttgcacaaacgttagtgtgtctttgtaccattgttctacagtgatgttacaaacttaatgctcagaaatagtgtttgacaatattgattttttttttctaatctattattggaatatgattctataatcacatcaacatatttcaatatttcataaggcgtgggaagtggcaaatatgttctttctagttgatattgttgtttgatgattatgtgggttgattctcttggttgtctcttagcgtgtgctaattttctggtcaatgaccttgttatgccttttcttgttgtcgctcttgtgtatagacctttgaatctttcagatcatatcagtaatatgtatatgctgttttcagttccttctaatgtcaatcaatacgatatcttcgtaccatgttgctgacatgcaattagcacatactacctaccatgttaatgattctaattggctgtacctttttatttcaaaggaacaagttgttttgtaaatccaaatgttaatgctttttgtggcactgtaatatgctcagaaatgcatgttcttctctgtgatttagtcaatagaaggtagtatgtgttatttcacatgcccttttccggatgggaaaaggcaaatttattgttggaatattagtaaaatgctgatcacatcaaccttacactttgaatttgcaattgaccccatgcaagtattacttttgcttaattcttctggtttatatagtttgttccgcctacttgtagtgaagatactaagcatgaaataaatgcaggcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgatgcgctggtgaggaactataagtctatcacccttgtctggaactatcattctgttatatgtgcccgtctttctctcatcttgcttcaacaggttatccttctgtaccctttagatactgatgcaccttttatccttttctcttttatcacgtcatatgcagcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtcagagaggatagagaaggagcttgctgaattgcaggagatgaaggtgaggatgatctctggcgaaacttgtatattgcagtccatttgtcagagattggttgtgcatgcatccattattaagagcatttttccatttgctttaacatatacttgttcacgtatacagaaaaatatcagcacaatgacagcagatgaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatccgtaacgacaactggggctactgaagagtggaggaactctttgtttccctttcttggaagagttaataattttgtcttgtgtcccagagtgtatgtataggggaatccactatcgcaacaatggtggtttccataccatgtggatggggcctgtttaaactcccaaactgattctaccatgtcgtccgtgctgcagttccaactgaatttgcttgtgttggacctcttcattttctagagggttgacccttaagaagtttatgttttattgtttttgtgttcatctccgttctacatgaataaagatgatcaattgttgaaagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0478200, RefSeq:Os08g0478200