Os08g0481200

From RiceWiki
Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0481200| Description = Similar to Arm repeat containing protein| Version = NM_001068598.1 GI:115476933 GeneID:4345853| Length = 2709 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0481200

Description

Similar to Arm repeat containing protein

Version

NM_001068598.1 GI:115476933 GeneID:4345853

Length

2709 bp

Definition

Oryza sativa Japonica Group Os08g0481200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23881746..23884454

Sequence Coding Region

23882007..23883059,23883138..23883566,23883657..23883773,23884067..23884396

Expression

GEO Profiles:Os08g0481200

Genome Context

<gbrowseImage1> name=NC_008401:23881746..23884454 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23881746..23884454 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccaccgacgatgatgctgccgccgtcgccgggcgactccgacccgtcggggtctcgcgacatggacgacgaggacctcgtcgaggatctcctcgtcaccgtcaactcggcgcgggccttcgtcgagttccgccgcacgcagcgcaaggagtgcgccaacctcctccgctggctggagctcgtcctcccgctcctcgaggagctccgcgactcggcgccgccgctcaccgaggacgcctaccaccgcctcgccctgctcggacgcgccttctccgccgcgcgccgcctcctccggtcgtgccacgacggcagcaagatctacctggcgctggagagcgaggcggtgcaggggagattccgcgccgtgtacgagaagatgaactccgctctcgacgggatgccctactcggagctcgccatctccgatgaagtcaaggagcaggtggagctgatgaacgctcagctgacgcgatgtaagaagcgggcggacacgcaggacatcgagctgtccatggatctgatggtgatcctcgacaacaaggagggggagaggaacgcggacagggcgatcctggagaggctggccaagaagctggagctgcagacgctggcggacctgagggcggagacgatggccatcaagaagctcatcagcgagaggaacgggcagagcggcgatagcaccaagcagatcatcgagctcctcaacaagttcaaggaggtcgccggcgtcgacgagaagaacgtcctcggcgaggtctccgtgacgaaatccctcgacaagtgcccctcgttgatgatccccaacgacttcctctgcccgatcacgctcgccatcatgagggatcctgtcatcgttgccactggacagacgtacgagaggaggagcatccagaaatggctggacagcggggagaggacgtgcccgaagacgcggcagcggctgtcgcacatgtcgctggcgcccaactacgcgctcaagaacctgatcctggaatggtgcgacaagaacaaggtggagctgcagaagagggagccggagcccgtggcggagcaggacgacgagcatcagcgcggcgccgaggacatcccgtcgctggtggaaggcatgtcgtcgatccacctcgacgtgcagcggaaggctgtgaagaggatccggatgctgtccaaggagtgcccggagaacaggacgctcatcgccgacagcggcggcatcccggcgctcatcgggctcctcgcctgcccggacaagaaggtgcaggagaacacggtcacgtcgctgctgaacctgtccatcgacgagagcaacaagcgccacatcaccaaggggggagcactcccgctcatcatcgagatcctccgcaacggcagcgcggaggcgcaggagaactccgccgcgacgctgttcagcctgtccatgatcgacgagaacaagctcaccatcgggaggctgggcggcatcgcgccgctcgtcgagctcctccagaacggcagcatcagggggaagaaggacgccgccacggccatcttcaacctggtgctcaaccagcagaacaaggtgagggccacccaggccggcatcgtgccggcgcttctcaagatcatcgacgacaaggcgctcaacatggtggacgaggcgctgtccatcttcctcctgctctcctccaacgccgcctgctgcggcgagatcgggacgacgccgttcatcgagaagctcgtgcgtctcatcaaggacggcacgcccaagaacaaggagtgcgcgctgtccgtgctgctggagctggggtccaagaacaagccgctgctggtgcacgcgctcaggttcggactccatgaggatctctccaagatcgccaagaacggcaccagtagagcgcagaggaaggcgacctctctcattcagctggcgcgcaagtgctactga</cdnaseq>

Protein Sequence

<aaseq>MPPPTMMLPPSPGDSDPSGSRDMDDEDLVEDLLVTVNSARAFVE FRRTQRKECANLLRWLELVLPLLEELRDSAPPLTEDAYHRLALLGRAFSAARRLLRSC HDGSKIYLALESEAVQGRFRAVYEKMNSALDGMPYSELAISDEVKEQVELMNAQLTRC KKRADTQDIELSMDLMVILDNKEGERNADRAILERLAKKLELQTLADLRAETMAIKKL ISERNGQSGDSTKQIIELLNKFKEVAGVDEKNVLGEVSVTKSLDKCPSLMIPNDFLCP ITLAIMRDPVIVATGQTYERRSIQKWLDSGERTCPKTRQRLSHMSLAPNYALKNLILE WCDKNKVELQKREPEPVAEQDDEHQRGAEDIPSLVEGMSSIHLDVQRKAVKRIRMLSK ECPENRTLIADSGGIPALIGLLACPDKKVQENTVTSLLNLSIDESNKRHITKGGALPL IIEILRNGSAEAQENSAATLFSLSMIDENKLTIGRLGGIAPLVELLQNGSIRGKKDAA TAIFNLVLNQQNKVRATQAGIVPALLKIIDDKALNMVDEALSIFLLLSSNAACCGEIG TTPFIEKLVRLIKDGTPKNKECALSVLLELGSKNKPLLVHALRFGLHEDLSKIAKNGT SRAQRKATSLIQLARKCY</aaseq>

Gene Sequence

<dnaseqindica>1396..2448#889..1317#682..798#59..388#ctcgaattttctttccccccgtctctcatgcgccattgatcggatcgcttgatgccgcatgccgccaccgacgatgatgctgccgccgtcgccgggcgactccgacccgtcggggtctcgcgacatggacgacgaggacctcgtcgaggatctcctcgtcaccgtcaactcggcgcgggccttcgtcgagttccgccgcacgcagcgcaaggagtgcgccaacctcctccgctggctggagctcgtcctcccgctcctcgaggagctccgcgactcggcgccgccgctcaccgaggacgcctaccaccgcctcgccctgctcggacgcgccttctccgccgcgcgccgcctcctccggtcgtgccacgacggcagcaagatctacctggtccgatatatcctgcattcctcatcttcctccgtcatcgtctccaattataaaagttaatcgatataacagaacgtgttctcgatcgcttcagttgttaataaactaaaacacgttagacgatgacagacacgaacacacaacatttgttaacaagattcagccgaaagctatgatctcaaagctctgcttacgaacgctactccctattcaatatagcacctagccgctaagagtgtatggtctcgtcgccatcgatcttaacgatcttgcattgcttcgtcttgtctcaggcgctggagagcgaggcggtgcaggggagattccgcgccgtgtacgagaagatgaactccgctctcgacgggatgccctactcggagctcgccatctccgatgaagtcaaggagcaggtaagcctgcctgcatgcatgtttctgcctgcatgacacatgcacaggtcagacatgatcatcatcatcgatcgccatggtttctttcaggtggagctgatgaacgctcagctgacgcgatgtaagaagcgggcggacacgcaggacatcgagctgtccatggatctgatggtgatcctcgacaacaaggagggggagaggaacgcggacagggcgatcctggagaggctggccaagaagctggagctgcagacgctggcggacctgagggcggagacgatggccatcaagaagctcatcagcgagaggaacgggcagagcggcgatagcaccaagcagatcatcgagctcctcaacaagttcaaggaggtcgccggcgtcgacgagaagaacgtcctcggcgaggtctccgtgacgaaatccctcgacaagtgcccctcgttgatgatccccaacgacttcctctgcccgatcacgctcgccatcatgagggatcctgtcatcgttgccactggacaggtataccaaaattctccaagaacaacacggtgagattcgaacgagtttgacgaatttgaatacctttggtttttgtagacgtacgagaggaggagcatccagaaatggctggacagcggggagaggacgtgcccgaagacgcggcagcggctgtcgcacatgtcgctggcgcccaactacgcgctcaagaacctgatcctggaatggtgcgacaagaacaaggtggagctgcagaagagggagccggagcccgtggcggagcaggacgacgagcatcagcgcggcgccgaggacatcccgtcgctggtggaaggcatgtcgtcgatccacctcgacgtgcagcggaaggctgtgaagaggatccggatgctgtccaaggagtgcccggagaacaggacgctcatcgccgacagcggcggcatcccggcgctcatcgggctcctcgcctgcccggacaagaaggtgcaggagaacacggtcacgtcgctgctgaacctgtccatcgacgagagcaacaagcgccacatcaccaaggggggagcactcccgctcatcatcgagatcctccgcaacggcagcgcggaggcgcaggagaactccgccgcgacgctgttcagcctgtccatgatcgacgagaacaagctcaccatcgggaggctgggcggcatcgcgccgctcgtcgagctcctccagaacggcagcatcagggggaagaaggacgccgccacggccatcttcaacctggtgctcaaccagcagaacaaggtgagggccacccaggccggcatcgtgccggcgcttctcaagatcatcgacgacaaggcgctcaacatggtggacgaggcgctgtccatcttcctcctgctctcctccaacgccgcctgctgcggcgagatcgggacgacgccgttcatcgagaagctcgtgcgtctcatcaaggacggcacgcccaagaacaaggagtgcgcgctgtccgtgctgctggagctggggtccaagaacaagccgctgctggtgcacgcgctcaggttcggactccatgaggatctctccaagatcgccaagaacggcaccagtagagcgcagaggaaggcgacctctctcattcagctggcgcgcaagtgctactgaagatgaggaccccgtttgtaattgtaactcattttctttccccctctttctcagtagaaaaaattctgttgcttgccctgttctagctgaatgcatatgtggtgtatcgccagaatggggaattggtggtggaattgctgaaaaaaaacaccctaaatgtatttgtgccgatttcagtcaaactagttgatattcctataccattataagctgagttagattttaatgctaggatatacgatattagtttatacaagatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0481200, RefSeq:Os08g0481200