Os08g0481400

From RiceWiki
Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0481400| Description = Similar to HAHB-7 (Fragment)| Version = NM_001068599.1 GI:115476935 GeneID:4345854| Length = 2015 bp| Definition = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0481400

Description

Similar to HAHB-7 (Fragment)

Version

NM_001068599.1 GI:115476935 GeneID:4345854

Length

2015 bp

Definition

Oryza sativa Japonica Group Os08g0481400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23891441..23893455

Sequence Coding Region

23892002..23892418,23892490..23892842,23892923..23892962

Expression

GEO Profiles:Os08g0481400

Genome Context

<gbrowseImage1> name=NC_008401:23891441..23893455 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23891441..23893455 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaagtccagcagcgcttctcccggtggttgcagatggtggtggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcggccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccgcgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgagatcaaggagctgaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggaggaggacccggcggcgtccgacgccgaccccccggccaccggcgcgccgcagggctcgtccgagagcgactcgagcgcggtgctgaacgacgcggagatccttccacacaagccagcgccggcggccgccgccgacgccgcggcctcggaggagacggaggcggtggtgaccggcgccgcgctgctccaccacgccgaggtgttcttccacgggcagcttctcaaggtggacgacgacgaggcggcgttcctaggcgacgacggcgcggcgtgcggcggcttcttcgccgacgagcatctcccgtcgctgccgtggtgggccgagcccaccgagcaatggacgacctag</cdnaseq>

Protein Sequence

<aaseq>MRSPAALLPVVADGGGGVGVEEEMDVDEDMAMCGGRGGGGGEKK RRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLER DYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAAS DADPPATGAPQGSSESDSSAVLNDAEILPHKPAPAAAADAAASEETEAVVTGAALLHH AEVFFHGQLLKVDDDEAAFLGDDGAACGGFFADEHLPSLPWWAEPTEQWTT</aaseq>

Gene Sequence

<dnaseqindica>1038..1454#614..966#494..533#aaaacagagaggcaagaaaaagaaaacggaaaaccccccgcccagcccaaccacttcactcctcccactccagtactcgactccaccacactccagtccagtccagtacactccgcacacgcgtgccacagggatcatgcgaagcctcaagaacgtcgcctcctcctcctctagcggcgtctctcggttgtaggagacgctcgtcgtctttggacggatcggagcttgggggaggaaggcgacaaccatggtgccgatggtcctgggtcacaagacgggcggccacaccgacgacgccaagtgccatcaccggaggcacagcaccgagcaaccccacctctccccattacccttcccccggccacccctctcctcctgatcatcacgcctttctctgcttcttccatttgatctttgtgacaacgtcgtcctcctcccgctactcttcgaatcttttgtgaatttcacgtcgtgagacagtagggattgaagcatgagaagtccagcagcgcttctcccggtggttgcagatggtaagttttttttggttggtggttttgtgtggtgattggagatcttggttgagatgggagtgtgtgtttggttgtgaaaggtggtggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcggccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccgcgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgaggtacgcacgccaagaaacggttctgatcacggacgagtgcaatgtttgtgacctttggccatggcacgcagatcaaggagctgaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggaggaggacccggcggcgtccgacgccgaccccccggccaccggcgcgccgcagggctcgtccgagagcgactcgagcgcggtgctgaacgacgcggagatccttccacacaagccagcgccggcggccgccgccgacgccgcggcctcggaggagacggaggcggtggtgaccggcgccgcgctgctccaccacgccgaggtgttcttccacgggcagcttctcaaggtggacgacgacgaggcggcgttcctaggcgacgacggcgcggcgtgcggcggcttcttcgccgacgagcatctcccgtcgctgccgtggtgggccgagcccaccgagcaatggacgacctagctagccgcgaaaactttgcttacttggctggggcgaataaacaattccgtagggggttttctgcaaatttttgtaaaatgaaattgtacctagtccttttttgtcaaaatcctccccctctagtacgtgggccacgtggccggtgagctagaaatggcactcctggctttctctggctcaagcagcgaacgatgcagaaaggggagccaagggagattcgtgggaaacgcaggggaaattccgcaaaagtagcgggagagaaaaaagtgacagtagtgtactccgtagtgtggaggaaggcaacggcggcagcgctggagggaacagtgtcgctgtcggtgggcccggcgccacgtgaaaagcagacttgtcgctgacagcgattcctggcgtctgcctagtgtgtctacgcaaaaagccttgccacacttgccctcctttcctggccacaagagtgtagttcctctcacaagttcttttgtttgtgaatttttttttgcaaaaccatctaaaatatcaataaaaaaaatccgatttggcacaaacaaaattttttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0481400, RefSeq:Os08g0481400