Os08g0484100

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Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0484100| Description = Similar to Exo-1,3-beta-glucanase precursor (EC 3.2.1.58) (Fragment)| Version = NM_001188705.1 GI:297726540 GeneID:92...")
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Gene Name

Os08g0484100

Description

Similar to Exo-1,3-beta-glucanase precursor (EC 3.2.1.58) (Fragment)

Version

NM_001188705.1 GI:297726540 GeneID:9271198

Length

3831 bp

Definition

Oryza sativa Japonica Group Os08g0484100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24001129..24004959

Sequence Coding Region

24001130..24001363

Expression

GEO Profiles:Os08g0484100

Genome Context

<gbrowseImage1> name=NC_008401:24001129..24004959 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24001129..24004959 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggcccattaacggggttcaccgtatgctccgtatgttcgaggatccctttccgaccgcgccaccgccaccgccatcgcccatcgccatcgccatcgccacggaggaggagcaagaaaaggcggcgggaaaagagagcgagcggctgggttcactggtcagggctagtgcgtgcggtgttgcgcttgcgtccccatcgatctttgggatgaactttgcggtaagcaaggtatag</cdnaseq>

Protein Sequence

<aaseq>GPINGVHRMLRMFEDPFPTAPPPPPSPIAIAIATEEEQEKAAGK ESERLGSLVRASACGVALASPSIFGMNFAVSKV</aaseq>

Gene Sequence

<dnaseqindica>2..235#tgggcccattaacggggttcaccgtatgctccgtatgttcgaggatccctttccgaccgcgccaccgccaccgccatcgcccatcgccatcgccatcgccacggaggaggagcaagaaaaggcggcgggaaaagagagcgagcggctgggttcactggtcagggctagtgcgtgcggtgttgcgcttgcgtccccatcgatctttgggatgaactttgcggtaagcaaggtatagtttcgccatccgcgaaaggggcgcgagattcgctgccccctgtctccacagcccagccacgcacgcagcagcatgatgccacatcgctctcgggtttcttttttttttttttgccgcggataggattggaatcttcctgtccctctcctcctctacaagtgtgtgcgctctatcgccgtgtcccagcttcttgtgcaggccttctgttcgatgaattgcccacatggggctcccccgcagtggcgtgctggtctttgggcttgtgtgcgtgttccaactgtcgcattcgtcttcaggtgaggagagcatcttgtggctcagtcatggtgctttatcagtgtgtgatggttcttgctgccatggttaaggagtgggaggtttagagtgtctctctgattgtctttgcagatgatgacttcaccaaggttagggcggtgaacctgggaggttggttggtggtggaggggtggatcaagccttcgttgtttgatggcatctcaaacggggacatgcttgtaggctctctggttcttggaggtttggagctcatgttgtggcaatgtcgtgcattttactttcttctcatgtgactgtcggattttcgcctcaggatggcactcaggtgcagctgaagtcagtggggctccagaagtacctgagcgcaaatggtggtggcggcgggaacttgacagtggatcaggatgttgcttcaacatgggagaccttcagggtttgttgtcttttctgtgtcaatgctaaagattttgacgattcataaatcgatattacgcgtatatttttttatcatatgcatatattactcagttcctacttggagattctgtgaaagctgcatgaaaaatggcattatcttcatcagtttttaggcccatagcttatttttctgttaatgcactacttatgttcctgaagttaggaaacagctagaaatcaaagtgttattaaaaaaatcaacaagaccatcaagtgcttgagtcactggttaataaatggccgagtttccatcctaattgcattttcttggtgctcctgtcagctttggagagtttcttaccgtgaatatcaattccggtgcatcaaaggtcagtttttaacagcaagtaatggagatgtgatctcagcaactgcagattcaccaggagacactgaatcattttacatcgaaaggaacaattcaatgcttcatatcaagcttttaaatgggggctatctgcaggttttctcatgttctcaatctcatacattcatgatgtcaaatggcagaaagccctgtcatcagataccttgctatagaaaaaaaaagttttagtttttggttcatcagtaccaacgtaaatagtgacatagttgacttatattccattgttcaggtcacaaacaataatcagcttacttcaaattatccttcccagccaggatgggatgatggtatggcaacatttgaaatgactattgttgccaacaacttacatggagattaccaacttgctaatgggcttgggcctgatcaggcaatggttgtcttaacagtaagtttcataatttcagagctgtgtcattcccggggttgcagtgcatttcgttgctcacgtactgttttatttattttacaggaacaccgaaaaaactttattacaggaaaagatttctattttctttcaaaaaatggtataaatgcagttaggattccagttggatggtggattgcatatgatcctaatccacctgctccatttgtcagtggttccctggataccctggatagagcattctactgggcacagtaggtctagactctaaactgttgttgttaattactatttccttttgaagtttcaagtctgcacagtatggaggttctgattttgatatcaggatttatggcttgaagtgcatcattgatcttcatgctgctcctggctctcaaaacggaatggaacacagtgcaagtagggatggttcagtagattggccttcaccagctaacatcgagaaaacactggatgtcattaattttctggctcaaaggtagcaccgatccatccactatattttcttgtatatcatgaaaaaattgctttaggtgaatgaaatgtttcttcaatatgcaattggtggcatgagggtagataatgtcataagggctctggggaaaaaatcgatgtcccattcttttcttttcttttcattcatctgaaatcatttcctacttgaattatgattactatgataaatctattcattcataagaaaatgcacgaaagtaaggagccattggatccaccgagaatctatccaaaataacatgaaaagcaataatatgcataacaacccggcaaaataatatgcataatacatgttccatagttctaacaagatgtacactctttatctgcagatatgcaaacaacccctctctcctaggtattgagctattgaatgagccttctgcaggcgcggtaccactaggcactctagtgtcgtattacaaaacaggataccagattgtacgaagttattcggacaaagcttacgttatattctgccagaggattgggaatgcagacccaatggagctttatcaggctgacctgggtccaactaacactgttgtagacttgcattactacaatctgtttgatccgttttttgagaaacttaatgcaacagagaacatacagttcatatacaataacagaatgcctcaagtgcaggccttggataaagcgaatggacctcttgtttttattggtaggtcctgcaaaatcaatttcctttgctcttttcttttcataattttttcttcttctctgtaatgaataatggtgctttctcaatttatccaactctgtgcagccattctttccttgtattcggtacatcttaatccccgttttctcatttttcaggagaatgggtaaatgaatggaatgtgacagacgcttcacaaaccgaataccagttgtttggaaaagcccaattagaggtctacggggaagcctcctttggctggtcttattggacagtcaggtgcaacagtgtgcactgggattatgaatggaacaaaaggaataggtacctcattggtaagcaatttatcctgttctaggttctccggagctgctttctaatatccagtcattctatactaaactctattatcaccatatagcatatgcagtgggattgcattagttttgtgattacttttgcttggtttatgccataaagtcacattaagcttggtcgtattaattaacacaggcatatgcgtcatataacggctgatgggtaatagttgctctactagaacttagatgagttgcagcgtctatttcaccttgcagttcgatccagtactctccattttctgtgctaactttttttttttcacttcgtaggtggttcaccgttggaaagcccaaagtacatgcttcttgtggcaggatgcctactctatcttttatttatattgacatgatacttgaaactcaccaccagaagatagaatttctcactttgaggcatttactcattcacaaaaatatatgaaaaaaaaagaagatatacgattc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0484100, RefSeq:Os08g0484100