Os08g0485800

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Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0485800| Description = Expansin/Lol pI family protein| Version = NM_001188707.1 GI:297726544 GeneID:9267730| Length = 1829 bp| Definition ...")
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Gene Name

Os08g0485800

Description

Expansin/Lol pI family protein

Version

NM_001188707.1 GI:297726544 GeneID:9267730

Length

1829 bp

Definition

Oryza sativa Japonica Group Os08g0485800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24108870..24110698

Sequence Coding Region

24109224..24109236,24109924..24110212,24110521..24110632

Expression

GEO Profiles:Os08g0485800

Genome Context

<gbrowseImage1> name=NC_008401:24108870..24110698 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24108870..24110698 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatcagcagaaggagctccatgctgttggtgatggccttagtgcttgggacggtctcccttgccacggccgcatctggagtcgccaccttctacactcaatacacaccgtcggcgtgctacgggaacaggaacatggggaacatggtggcggcggcgaacgacaggttgtacaacaacggcgccgtgtgcgggcggtgctacgccgtgaagtgcgccggcgcggcggccggcggcggcggaggcaacccctgcaccggcgccagcgtcaccgtgaagatggtcgacaactgcgccagcagcgacgggtgcacgagcaccatcgacctctccagggaggccttcgccaagatcgccaacctcgacgccggcgtcatcaggatcacctacaacccaacggtatgtccgtag</cdnaseq>

Protein Sequence

<aaseq>MAISRRSSMLLVMALVLGTVSLATAASGVATFYTQYTPSACYGN RNMGNMVAAANDRLYNNGAVCGRCYAVKCAGAAAGGGGGNPCTGASVTVKMVDNCASS DGCTSTIDLSREAFAKIANLDAGVIRITYNPTVCP</aaseq>

Gene Sequence

<dnaseqindica>1463..1475#487..775#67..178#ggtgtgtgctttgcggtattaactcgtgctttcccttcagtagttaagcgtagagaatttgaggccatggcaatcagcagaaggagctccatgctgttggtgatggccttagtgcttgggacggtctcccttgccacggccgcatctggagtcgccaccttctacactcaatacacacgtaaaattgaatccactagctagtaataactaattaagttggatttttttgcttcacatgcttcataacaacataagcttaaattataattatgaaaaaaaaattgaaacactttatttttcatttttgcatgcaaagcatatgaaagaactgttaaactaaactaaccatctctctctctgatctcttgaaatttactaaccatgtctctaatccattctctctctctatatatatatgtgtgtgtgtgtgtgtgtgtgtttgttttgctatatgacatagctgaccatgtatctgtgtctctacagcgtcggcgtgctacgggaacaggaacatggggaacatggtggcggcggcgaacgacaggttgtacaacaacggcgccgtgtgcgggcggtgctacgccgtgaagtgcgccggcgcggcggccggcggcggcggaggcaacccctgcaccggcgccagcgtcaccgtgaagatggtcgacaactgcgccagcagcgacgggtgcacgagcaccatcgacctctccagggaggccttcgccaagatcgccaacctcgacgccggcgtcatcaggatcacctacaacccaacgtacgtatagtacgcccccggctctggccacactcgatataattatttcctgcattttcgctttcgatttctggaagaaaatgtttctaactgaattttcgcttctactcgttaataaactctcacggctatatgtaaggtcatctttttaatatgaagttaaatgtagatggataaagagtcgagagtggtctacagtattttttttaaacattaaacggcaggagatttgtcggatatattaggagaaaaagagtcttacatgggcctttaggaaaataaaaacaacggagaagcaaaagagtgatttgagtgttataaaggtaaaattgtccgatccaataaaaaatattgaatacccggtccaaagtaaaaacattggttaaaatatgatccaaaggaaaacattggtaataaaaaatggtccagaataaaattcactctaagtttatttttacgttgtatacaattatatcaatcaatctatattgttataatctgaacccaccataatcaaacgttgcagatatttttccttttctttaattagtgtgttaattacttgaccagttggcctctatagtggatgtggtagctttttttcaagctatcttaatataaaaaaaatattgtgtttgagattttccatatgaatgtggtgcatttcatctcctctttttctctcagggtatgtccgtagagtttcggagctacttcctccatttcacaatataagtcattctagtattttccacattaacatcaatgtatctagattcattaatatcaaaataaatgtggaaaatgctagaataacttacattgtgaaatggagggagtagaccatataattattattatggtcatcacatttgccacgtcgaggcaagaacccaagaaggatagatatttcagattttcagtagtaatataacgcaataatgttcctggaagaaaaatataagaggaatgtaataatgttgggttctgttaaccctagcggttatgtcatcgttaaataaaagaaaggaatgtaataatgttgggttctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0485800, RefSeq:Os08g0485800