Os09g0436900

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0436900| Description = Protein of unknown function DUF1350 family protein| Version = NM_001069798.1 GI:115479338 GeneID:4347153| Length = 4...")
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Gene Name

Os09g0436900

Description

Protein of unknown function DUF1350 family protein

Version

NM_001069798.1 GI:115479338 GeneID:4347153

Length

4784 bp

Definition

Oryza sativa Japonica Group Os09g0436900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16751195..16755978

Sequence Coding Region

16753472..16753523,16753613..16753728,16753825..16753914,16754000..16754131,16754457..16754585

Expression

GEO Profiles:Os09g0436900

Genome Context

<gbrowseImage1> name=NC_008402:16751195..16755978 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16751195..16755978 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctatgatggaggcatcacctgtttactctgcggccagaaatgcatcaggagatgcatggaaggccctatttgatttagctggaggtttgatacaggtgtatgatcaagaagctatgttatccctgagcaaatttgtcgaccagttaccatcagtgatgaatcaggttacagaaggtgtatctgaattcaaaccaacaccacctgaaaaccgtgaattctgcaagaattcctacaatgtacctaatacactattggtgaaattcagcattgatgctattgatgatacagagattgttgaagatgtcttgaagccccgggttgagtcaattggtggacaaataaagaaggttatactgtcaggaacacatctaactccatgcatacaggatgtgaaatggcaggttggttcagaatacactccagcagatgctctagcccagggtttgaaatcattggctctcaatgaaactagggtcctctcaagaactattgctgattggtttagatccctttaa</cdnaseq>

Protein Sequence

<aaseq>MPMMEASPVYSAARNASGDAWKALFDLAGGLIQVYDQEAMLSLS KFVDQLPSVMNQVTEGVSEFKPTPPENREFCKNSYNVPNTLLVKFSIDAIDDTEIVED VLKPRVESIGGQIKKVILSGTHLTPCIQDVKWQVGSEYTPADALAQGLKSLALNETRV LSRTIADWFRSL</aaseq>

Gene Sequence

<dnaseqindica>2278..2329#2419..2534#2631..2720#2806..2937#3263..3391#gtgttcgtctcttccctcctcgcttccttcccttcccatggcggcggcggcggcgaccgcggcggcgcacctcctatccaccccgccctccgcctctccagtacacccccctccccatgcccgcatcctctgcgcccaccggaccaaaggcgtcgcaaccctctcctgccgcgcatcgcttggccccgatggctcgctcgccgggctcgccgctgccgctgctgctgcccccagggtggagcctcgggggaggccgtacctgcgggaacactcctgcctcatcttcccgccttcgccgcgcggccgccgcccgctcgccgtcgtcaagttcctcggcggcgccttcatcggcgccgtccccgaggtcacctacaggtaacacaaaatcaaacgcgcgcgcgttcgaattgagggagaggaggggaaatgggagttctgatttcgcgttggcgcagccatttcctgaagctcctggcgcaggagggcttcctggtggtgtccgtgccgtacaacgtcaccttcgaccacgaggcggctgcgcgggaggtgtacgagcggttccacgggtgctacggcgcgctgctctcgtcgggcctcccggcggccggcctgagcgcgatggacatcgcggagctccctctctactcggtcggccacaggtgatctgagctgagcacggggggtgttggattggacgccacctgttcgatgttttgccaaggaggaaattttgaaaaaaataaaatctgatcgatgtatgtgacgttgtctttaattattttgtgatggttttgcagcaacggtgcgctgcttcagctgttggtggggagctacttctcggagaagataccaaaggttcacataaatgaggataccgaattcgaattattaaaatttccatatgatgcttagttgtcttcgaattattaaaatttccatatgatgcttagttgtctgattctgatcattttaggctaatgccattgtctcgttcaacaataggcccgcttcagaggctgttccatactttgagcaggtatttaatgtgctctgtaacgtgttgcattgcattgctctcaccttattatgaacaggagtagctattctgttccatacattacagtttcaaactaattgaaataggagacatgctaattttgtgaattaaagtactaaacaagatttagttgaagagctaaacaaaaatcaagtcttgatttgtcagtatcgctttcgtcttgagcattgtgatagattcttttgttgggcttacataagtttctggaatctttaaaacatttttggcattttacaaaagaaattgatcagtgaatatatatttctgataacagtagatgacaggaaactatttttttttaaattagctttatgaattgggaggtacaatcatctctcagcattaaatgcgtgtgattggtgacgacacagctgcaaggttataattttgagaatggagaagaaaataagcccttcttggttgtaagttgtaactacatagcaaaaaaaagggttttggctaaaggttatttaatagcttctccctcatttattgcttgtgcgtgactaagatagatttaacaagtttagatggtgaaatatagaatcatctaatggtggcgctaattgtcctggttatgatcaaagccttgcagattgattttgtaagacaaaatgtgtatgtgtagaacatgctcatgtctttgaccccatgccttcctttgtaccttgcataccaatgccttgctttgtactgaacatgtagaccaccaccttcaccgagcccacataatccattgtcattgtatggagaatgcacctggtttgatggtaagctgcaatgattactctaccatgcctttgcttgggacagagcttttctcttgaaaaggagttcagatggagctcaaaactcttaattttactaaagttagttctgcactgcattgtgtggtgacagtacgctagtgcatttcgaagtccaaaaggtacaaatgtgaacctagcagcttcttgcataacctgtctaaaatttgttaacaatgaataataagcaattccttaaaaagaaagagcgaagtgtcaagaaaatatgtgcaatgctttgttgatgtacttcatctccaacacacattttgcgcttagagctgatttcagtctaaaatgttactacatattcctgcttcctggatttttgtggttattatctaccttagaagtgatcttttagtgcagataggccccctttttagtcaagtaatgcctatgatggaggcatcacctgtttactctgcggccagaaatgcatcaggttactgttcattttggttgtcccttcttaagatttatcaaaatgcttcatggacctttatagtaagatgcggtgtcatggttttgtaggagatgcatggaaggccctatttgatttagctggaggtttgatacaggtgtatgatcaagaagctatgttatccctgagcaaatttgtcgaccagttaccatcagtgatgaatcaggtactatataaatctaagttctttcattttataacaacgatttcataaaatgtttagcttagttctgcccatatctgtttcctatgttattgacaggttacagaaggtgtatctgaattcaaaccaacaccacctgaaaaccgtgaattctgcaagaattcctacaatgtacctaatacactattggtaggtttgatgaacttcttttcactttggtaaacctctctctactctaatcagtgtatattaatacttgatgcatgcactgtaggtgaaattcagcattgatgctattgatgatacagagattgttgaagatgtcttgaagccccgggttgagtcaattggtggacaaataaagaaggttatactgtcaggaacacatctaactccatgcatacaggtaaaatttgctatatcttcctctcaaattgtatgatgcttcaggtgcaggcagagagttatacaaactcatctatatttttgtagcactaaatgtgttattgttaggggcaattcaccaccaattctcatgcatattcaagaaaaaatcaccaccaatagcaagcaaatttttacggtcattcgtgaccagctggcaacttggcattctcaaaataacttcatcgtagcaaaaacaacttatttatttgttcttatagtcattatcatttctctatgcattatttgtgtccatgtctcaggcactaaccaaaacaatactacaggatgtgaaatggcaggttggttcagaatacactccagcagatgctctagcccagggtttgaaatcattggctctcaatgaaactagggtcctctcaagaactattgctgattggtttagatccctttaaatgtttagtcacattgtgcattcattgaagtcgtacatctgcttacaaaggtatgcacttacactacagtatctataattcacatagtcaattcacaaccattcagacttctacacctcaatgtaacttactgtggtgtagaaaactattccctccatccgaaaatataacttctaccattcaaagggtgtgtttagttctttgggtgtaaagtttttgaagtatacggacacacatttgaagtattaaacgtagactaataataaaataaattacagattccgcctgtaaactgcgaaacgaatttattaagcctaattaatccgtcattagcaaatgtttactgtagcatcacattgtcaaatcatggcataattaggctcaaaagattcgtctcgcaatttacatgcaaactgtgcaattagtttttttcgtccacatttaatgctccatgcatgggtccaaacatttgatgtgacctttttggccaattttttttgaatctaaacaaggccaaaatttatcccaaaatatagcaaaatttccacccacattctcttctcaatcaatcacaacctttgaccattcaaattcttcaccttcagttttcttctcaaccaaccacagtatttcctcatttaattcaacatactttcgtaatacccgtatccaaccctaaaactatttatattgtgggatggaggtagtataaaatctagaccattcctttcatcagttattttttttctacacacaccttggctttcatcagttattacttatttagtcagttaactctggcacatgcatcagaaatgttgtcacttcagcttgctgatgcaatcatacaggatcgctgtggcaactggcaaggagacattggagtccaaaatttactaaagagtcatgcatttgggctgagttgagttggtcatgcatgctcacccacaggccgtaccaaagatatctgatcaggattggggagcttgggcccgagtgtttccccttggactcttgtcacagcacctgctatacaatgcatttaacccatggtccaaggaaacatatcctgtctcaggtatggcaccaccaaggccgagattggccgtatatttttcttgcaacacacatgcaagcctgtctatacattgtatgtgtaacacaacacgtgctgaatatcatgtttgtattttcttcacgttcttacggtacagctcagagaattggatagttctgtgtacagctacacgtgttgagccaagcagctcgtactcccggcttgatttggagcagattgattttgctcaccggagactgtaaccattgttttggttttctggttctctagaacatggcaagaataaggcaagaaattgcaatcttttccacacac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0436900, RefSeq:Os09g0436900