Os08g0487000

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Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0487000| Description = Conserved hypothetical protein| Version = NM_001068633.1 GI:115477003 GeneID:4345888| Length = 2533 bp| Definition ...")
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Gene Name

Os08g0487000

Description

Conserved hypothetical protein

Version

NM_001068633.1 GI:115477003 GeneID:4345888

Length

2533 bp

Definition

Oryza sativa Japonica Group Os08g0487000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24167682..24170214

Sequence Coding Region

24167695..24167793,24167895..24167965,24169008..24169111,24169642..24169693,24169777..24169924

Expression

GEO Profiles:Os08g0487000

Genome Context

<gbrowseImage1> name=NC_008401:24167682..24170214 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24167682..24170214 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtcctccccgtggatccccaccgccggcgctccgccgccgcgggcagcgccggccgtggtctactcctggctgtcggagcgccaccctgtcaaggaggcaggagcaggagcaggcgcttccaacgcgcaggagtccaggccccgcgtttctccggcggagaactctgaagtggaaacccgagagcatgaagagaaggtcaacaaatatcaggctgtccttgcagctcgtttgaaggccaaatacttttctggcaaggcttttggtaaagaaaatgtgtttgaagaaatgactatccagtctgagaccattctgttaagcaggtgcccgttttcaagtttatttgcagatccagcaaaattttgccgggagaagagctgtactaaagaggacatttatccatctttgacaaatgcctcctttgccaagcataaccatttatctctagttcgtgaagactcgtcgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MPSSPWIPTAGAPPPRAAPAVVYSWLSERHPVKEAGAGAGASNA QESRPRVSPAENSEVETREHEEKVNKYQAVLAARLKAKYFSGKAFGKENVFEEMTIQS ETILLSRCPFSSLFADPAKFCREKSCTKEDIYPSLTNASFAKHNHLSLVREDSSK</aaseq>

Gene Sequence

<dnaseqindica>14..112#214..284#1327..1430#1961..2012#2096..2243#gccggccttccaaatgccgtcctccccgtggatccccaccgccggcgctccgccgccgcgggcagcgccggccgtggtctactcctggctgtcggagcgccaccctgtcaaggtatcgtgccttcccctctcggaccagcggtaatctcccttcgtctcgccgccccagctcgctgaacctaacacctagggtttctcgtctcacccgcgcaggaggcaggagcaggagcaggcgcttccaacgcgcaggagtccaggccccgcgtttctccggcggagaactcgtaaaatgcctcttgcatgcccctctccccacctttttcttggccgtttctgattttctgcaatgcgtgctttgtgtttgttatatttttttgaggtaattgtgtttgttatattgtcgccacgaatgattatctctgcaatttagatatttcagtaagcgaatgtgagcgcaagaaccagccattgtattagcttcgagccttcgagtcgatagtgctggtcttttgcttaattgctcgtctgtgacacggatgaagtgggcagtagttggttcatggttgatgtggtcgacttattgcttggaacatattggcaataagcaagatgaagtacaacagttttacctgcataattcgttatcttgtgcaagcacctgggtgtggtacttgaaatcttgaacaatgctgtgaacaagaaggaatggttaataatgatgcttttcatctggttagagaaaatagaaatgtgttgagttcaaaataaaataggggttacataaaaaaaatgggggcgacctactttttttctgaacagaaatcacctcccttccaaatcagtttggtctatctggtcctctactgataactgccttctaaattcccatttccacctctcctctgaccacatcccattgacagtcctccccttcttcctgcttatgctatataacttgggaaacaacactttcagaggcactgctccacaccacacatcatcccagaattgggcatgattcccattcccaacctctctcacaactaacttacttacccactgattgcaaaccccacaagcagagcccctggccttgattttttgtattttgttttcaatagtaaccaactttatttgatctgctaaaatgaaaatgcatgtttccaattccaacaattgtgttgaattgttttgtatatcttcttcttggtcaaatgatttggagttgtgaacctgtatattcttaatttgtagttaagttcctgattagtgacctgggcaaataatggattcatatagtaaacattattgtattactttgcatagtgaagtggaaacccgagagcatgaagagaaggtcaacaaatatcaggctgtccttgcagctcgtttgaaggccaaatacttttctggcaaggcttttggtaaaggtaccagtgcactccaatcttatgacaatagtatggcatggcatattatggtttacagaagatttgcttgtttgttcaggcagtcagatatctgcctggttagattatcttttttttttttaaaaaaaactttgatatctaatagatcatttcctgcatgttagcttagaagaaagctcaactgtatggttcaacaattgacatggaatcttcaaatggtctgagtcatgatccactaaatcaacaaacacaattagtctgtgtcatgttttggccttgagatgcaacctgtcattactaaaagatatttatattattgaatccaagatatgctaagttgactatcctaacaatcatctcgaagaaatgcattaatatgccttccttactttgtaaggatagccagtgaccagatgtggtagtagagtttgcctttttgttttcttactaatgaattaacttcaagtgatagtttttttccccgtattgacaatgattttttttttaacgtttcaccatttggtggacagaaaatgtgtttgaagaaatgactatccagtctgagaccattctgttaagcaggtgagttgtcttcgctatttgtgtgtttttccaatattgttctaaaatttcatcataagaaccattttccttttgtttcctaggtgcccgttttcaagtttatttgcagatccagcaaaattttgccgggagaagagctgtactaaagaggacatttatccatctttgacaaatgcctcctttgccaagcataaccatttatctctagttcgtgaagactcgtcgaagtaattagcggacagtttgtctgcagaaaactcttaacacctgccaagtggcacctgtctatcaataccacctaatggatgagggttgggtagttacattattaactacatatgttatccttaaactaaatgaactgaaacatgtaaaatatcaacaggcctaatttaacttgagagtttagtttcttcttgtaggcctgttgagcatatagatagctatgaacttaactctatgcaaaacaatgctcatattgagattattcctctagggggatgtctccaacattttacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0487000, RefSeq:Os08g0487000