Os08g0487300
| Gene Name |
Os08g0487300 |
|---|---|
| Description |
Zinc finger, SWIM-type domain containing protein |
| Version |
NM_001068635.1 GI:115477007 GeneID:4345890 |
| Length |
4953 bp |
| Definition |
Oryza sativa Japonica Group Os08g0487300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:24190037..24194989 |
| Sequence Coding Region |
24190037..24190189,24190275..24190352,24191285..24191667,24191753..24191815,24191887..24192142 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:24190037..24194989 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:24190037..24194989 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcattcatgaactgtcgacctgttctctgcattgatgggacattcttgactggaaagtatcgggatcaaatactaacagcaataggggtagatgggaacaatcaggtattgcccttggcatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttggtatgaggccaaatgtgtgcctgatacatgacaggcacgctggcattctgcgagcgatagaagagttgcaatttgggagtatggaacgaggataccctggtgagtgggaagatgtacatagtaggtggtgcatgcgtcatatgagagctaatttcttcaaacatttcaagaacaaggagctcatgaacatgttcaagaggctatgcaatgagctttggaagagattagatgagttgacagccaaatgcagtgatcagcgtgcagcggctccatcgaccgccgttgctgaccctcctcaagctcttggacctctcccaacggatagtccaacattggttagaagaactggagtggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacatgtggtgctagatatggaataatgacaacaaatttggcagaagtttacaactgggtgatgcgcagtgtccgtggactcccactagttggcatagtggagttcattttacatgggacatgcagcattttattcggaactttcatgcagaaaaagctagaggagttgtgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacagcacaggtttgagatactatgtcaagataaggcaagcaggggtatctaccgcaagagagtgaaacaagaatgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcaacggagtgtggcataccagatgcagtatatgtgtcacagtacttcagtaagcaagcagtatatcatacatggggtggcgagatttatgggttcggcatagctagggagttcacagagactaacgatgaagtactcaatattcctgacccatcgaagctccgaggcaaggctgcaaggaggaagactcgtcgcatccgcaacgatatggacgagtcggaggctgccagggtgaagcgttgcagcaaatgcgatgaacgtgggcacacctacaagcattgtcctaaagacaaggagaaaccaagtgcggcggaggcaggactatcaggatcagcagcagatggagctcgccctacggcttgtactcttggcgaggtgcctcagtggacgtggggttccgcgttgttggcggctcagtaccgtggcctttgtgaggcttgcacgaagtcggatcccagcgcgacctttggtgggtgccctctctttctttctatctgggcagctgagaggattgcaatcggccgccctgaggtggaccagcacacgtacgaggagtcactatacgcggagcgaccggaggtcgactaccctacgatgggtactctgtggtgccgtcgtcagcgccgatgggctcacgtccaggttaggcggtcgtatcctgagttcgttatggagttcgaccgccttctgccgactgacgtcgtgtgggagccctacagtgccgcggctacccaggctcgtgcgccgttgggtctgtccacactctgcacaagggaccaggcgtattggatgactatgattccgatggtcttcgacatctgcgttgagcctcatgcccctttccgcgtgatgcggcaattcggcttccgtcagccttttccagtactgttttcgacgaccgtcccagctgatgttcaccggtactcgcgcaagggtcagcagtcagctggcaactggcccaccaagttggggacttttgttgaggactggttgctcgcaaccgaggaggtcgtggagcacgagggagagccacacaccgaggaggtcgtcgacatcaacagggtcgtcgttgacagttcaacgacgatccaacgtttaggcgcggggattccagtatccgtagaggagcacctgacgacgtacacgtggatggtggagtcgatgcgctcgattctccgagtgctcacctgtcgtgcagacgacgttgctcgggcagatgcagcaccacagcggccacccgtaccgactggtccccgtccagctgcgcacgttcctaggctgactccccctccgcatggagggtttcgtgcaccgttcagcaccccgcctttctcggctaggccttttgttgtgccccccacaggttttgcccagttcgctacgacgcaggccgcccacttctcccaggctgcagagtcagcgtctcaggcaactgtgtcgacctcgcactcagcgcagttctggcagtataccgggacttcgtcacaagcagccggcacgtcgagtcagggtccaccactggaccatgctgggacctcgtcagaccacttggtggcttccgccttgctcttcgacatcactgacttcgacttcgcttcaggctcgacagaggacgtcatcggcccctcacagctgggaggtgcaccgccggtgcagacgcaggaccaggcgcaggccactccgccaccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcccaggaccacgttcttcgttccataaagcctacaatattgggtcgaaggttctttgtttgtccaaatattcttgacgacgatttcatggaaccaccaaggagatgtcaatacagagaatggatagacaccagaagggttctaactccacctagccgtgttgtgcagcttgaactatcagagcaatacagggttactaaagcgcagtttgagagaggagatggatcctcatataggggttag</cdnaseq> |
| Protein Sequence |
<aaseq>MAFMNCRPVLCIDGTFLTGKYRDQILTAIGVDGNNQVLPLAFAF VESENTDSWYWFLKLVKTKVVGMRPNVCLIHDRHAGILRAIEELQFGSMERGYPGEWE DVHSRWCMRHMRANFFKHFKNKELMNMFKRLCNELWKRLDELTAKCSDQRAAAPSTAV ADPPQALGPLPTDSPTLVRRTGVEIRKFSQWILHEPKEKWAKAYDTCGARYGIMTTNL AEVYNWVMRSVRGLPLVGIVEFILHGTCSILFGTFMQKKLEELCKKAMKHRALVQGTQ QHRFEILCQDKASRGIYRKRVKQECVLKADGTCHCSCAKPKLLHRPCTHVIAAATECG IPDAVYVSQYFSKQAVYHTWGGEIYGFGIAREFTETNDEVLNIPDPSKLRGKAARRKT RRIRNDMDESEAARVKRCSKCDERGHTYKHCPKDKEKPSAAEAGLSGSAADGARPTAC TLGEVPQWTWGSALLAAQYRGLCEACTKSDPSATFGGCPLFLSIWAAERIAIGRPEVD QHTYEESLYAERPEVDYPTMGTLWCRRQRRWAHVQVRRSYPEFVMEFDRLLPTDVVWE PYSAAATQARAPLGLSTLCTRDQAYWMTMIPMVFDICVEPHAPFRVMRQFGFRQPFPV LFSTTVPADVHRYSRKGQQSAGNWPTKLGTFVEDWLLATEEVVEHEGEPHTEEVVDIN RVVVDSSTTIQRLGAGIPVSVEEHLTTYTWMVESMRSILRVLTCRADDVARADAAPQR PPVPTGPRPAAHVPRLTPPPHGGFRAPFSTPPFSARPFVVPPTGFAQFATTQAAHFSQ AAESASQATVSTSHSAQFWQYTGTSSQAAGTSSQGPPLDHAGTSSDHLVASALLFDIT DFDFASGSTEDVIGPSQLGGAPPVQTQDQAQATPPPDTRATRAVPPDRFTYSQDHVLR SIKPTILGRRFFVCPNILDDDFMEPPRRCQYREWIDTRRVLTPPSRVVQLELSEQYRV TKAQFERGDGSSYRG</aaseq> |
| Gene Sequence |
<dnaseqindica>4801..4953#4638..4715#3323..3705#3175..3237#2848..3103#2495..2618#2092..2390#1749..2011#792..1396#1..740#atggcattcatgaactgtcgacctgttctctgcattgatgggacattcttgactggaaagtatcgggatcaaatactaacagcaataggggtagatgggaacaatcaggtattgcccttggcatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttggtatgaggccaaatgtgtgcctgatacatgacaggcacgctggcattctgcgagcgatagaagagttgcaatttgggagtatggaacgaggataccctggtgagtgggaagatgtacatagtaggtggtgcatgcgtcatatgagagctaatttcttcaaacatttcaagaacaaggagctcatgaacatgttcaagaggctatgcaatgagctttggaagagattagatgagttgacagccaaatgcagtgatcagcgtgcagcggctccatcgaccgccgttgctgaccctcctcaagctcttggacctctcccaacggatagtccaacattggttagaagaactggagtggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacatgtggtgctagatatggaataatgacaacaaatttggcagaagtttacaactgggtgatgcgcagtgtccgtggactcccactagttggcatagtggagttcattttacatgggacatgcaggtattttagggatcggttctaggcagttcttccctctataccgaacaacagcattttattcggaactttcatgcagaaaaagctagaggagttgtgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacagcacaggtttgagatactatgtcaagataaggcaagcaggggtatctaccgcaagagagtgaaacaagaatgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcaacggagtgtggcataccagatgcagtatatgtgtcacagtacttcagtaagcaagcagtatatcatacatggggtggcgagatttatgggttcggcatagctagggagttcacagagactaacgatgaagtactcaatattcctgacccatcgaagctccgaggcaaggctgcaaggaggaagactcgtcgcatccgcaacgatatggacgagtcggaggctgccagggtgaagcgttgcagcaaatgcgatgaacgtgggcacacctacaagcattgtcctaaagacaaggagaaaccaagtgcggcggaggcaggactatcaggatcagcagcagatggagctcgccctacgggtgaaggcactacctcaactcgaccacgtcctaggcggcgtcgtgccacgtctggctacgtggtgtagttcttgtgttctatgttggcatgtggctttgcttgtaatttgtttcgaacttatcgatgtgtttatgtttcgtcgtgtaatgtcagacttcggcatgtcatgtctttagatctcgtgatgtaacgtcagacttaggcacgtaatgtctttaggtatgctgacgtaatgtcggacttcggcatgtaatgttatgttatgttatgtaatattatcgaactctacatatatgttaaattgcacgtcatcgttatgtacccttagtaacatttgttgtatttaaatagcttgtactcttggcgaggtgcctcagtggacgtggggttccgcgttgttggcggctcagtaccgtggcctttgtgaggcttgcacgaagtcggatcccagcgcgacctttggtgggtgccctctctttctttctatctgggcagctgagaggattgcaatcggccgccctgaggtggaccagcacacgtacgaggagtcactatacgcggagcgaccggaggtcgactaccctacgatgggtactctgtggtgccgtcgtcaggtacgttgcatcgatcttctcttattgttaagttcattgctaagttcattgtacatcacatcgatcgtctcatattgcagcgccgatgggctcacgtccaggttaggcggtcgtatcctgagttcgttatggagttcgaccgccttctgccgactgacgtcgtgtgggagccctacagtgccgcggctacccaggctcgtgcgccgttgggtctgtccacactctgcacaagggaccaggcgtattggatgactatgattccgatggtcttcgacatctgcgttgagcctcatgcccctttccgcgtgatgcggcaattcggcttccgtcagccttttccagtactgttttcgacgaccgtcccagctgatgttcaccggtaagatctttcactacgctttgatttgttgcattaaaatctacctctccacaataatttgcaacatctgtcgattcacactaatatgatacattaatttgcaggtactcgcgcaagggtcagcagtcagctggcaactggcccaccaagttggggacttttgttgaggactggttgctcgcaaccgaggaggtcgtggagcacgagggagagccacacaccgaggaggtgtaccaggcctacctacgctagtaccagccacgcacccatactagggtcaccttcgctcccttggagcagcaggcccacgttgcgagcactaaagacctctacgccaggcaccgcgaccaggacttcgctcgtgctgtgagtaccctgcatcgcaccattcctttatgttttattcctttctcttcatcaaattttacgaatatttacgaacaaattaaccatgcaggtcgtcgacatcaacagggtcgtcgttgacagttcaacgacgatccaacgtttaggcgcggggattccagtatccgtagaggagcacctgacgacgtacacgtggatggtggagtcgatgcgctcgattctccgagtgctcacctgtcgtgcagacgacgttgctcgggcagatgcagcaccacagcggccacccgtaccgactggtccccgtccagctgcgcacgttcctaggctgactccccctccgcatggaggtaagtatttttaaggattttttgtacatgcctcgcacatctatgtgagccgattcatctgattgcttcagggtttcgtgcaccgttcagcaccccgcctttctcggctaggccttttgttgtgccccccacaggtacttacaaaacaacagtacttcgacaatcaatttagatgcattttatgtcttagcttacaagggtcccgttgttgatgtgtaggttttgcccagttcgctacgacgcaggccgcccacttctcccaggctgcagagtcagcgtctcaggcaactgtgtcgacctcgcactcagcgcagttctggcagtataccgggacttcgtcacaagcagccggcacgtcgagtcagggtccaccactggaccatgctgggacctcgtcagaccacttggtggcttccgccttgctcttcgacatcactgacttcgacttcgcttcaggctcgacagaggacgtcatcggcccctcacagctgggaggtgcaccgccggtgcagacgcaggaccaggcgcaggccactccgccaccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcccaggaccacgtgcgagcataggcccggaggaccaagcgtggtcgcggcacggggcagggccagtagagcagacttctctttgtttatttgcttcacatgctagtattgtatgcttgtgtaatgaatacattgttgttatatgtgcacgatacctttcggcgtatgcacgactactttctgccgcaccgatgcaacctcctttattcgcgtgcgatacgagtatttgcccgccatttgccgcatacgaccaatgtaactttcggcgccaatcaggcgtacccaccatgccccgccacgttcacatgtcagggatatcactcgattttttgtgcctatataagtcgccttaacgagcgaggcctcacaatctttcagaactcagtcgcattcagtactctcttccctactttcttcattacaaatcctaccggctttcgtcaatggctagacgcctgggcgttgaggatccgaactggcgtagcgatccttgtgtatacctactaccaccttggtgccagcgtcctctctgcctatgcggtgatcgatgccaactaatggcttcgaggaatcctgatattcgaggaaggcgcttttttaggtgacctaactatgactgtgaggtattttattatctgcatatgcttattcattccgtatgggcaatcgttttattcttcgtaacactactctattcggtagacctgcactacggcttccgcatacatcgagtgggtcgatacagaaaatcccgttctcgaccctaaccacttgtttacaagaaggtcgctggtatttcgcatccgagtactgagcaatacttgcagagaaaagcggctttcgaacgacaatgtcgtgaacaacagtgcgactggcgggtgctaactacggcactccctccatgggaagcccgtccaagatgcaggtgtggtgatcgttgtcaggttcttcgttccataaagcctacaatattgggtcgaaggttctttgtttgtccaaatattcttgacgacgatttcatggtaagaatattttgattacatgaatccttattttctcacaacatttactaactttgctcgcttcacatctattctttccttccaggaaccaccaaggagatgtcaatacagagaatggatagacaccagaagggttctaactccacctagccgtgttgtgcagcttgaactatcagagcaatacagggttactaaagcgcagtttgagagaggagatggatcctcatataggggttag</dnaseqindica> 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| External Link(s) |
