Os08g0487500

From RiceWiki
Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0487500| Description = Zinc finger, RING-type domain containing protein| Version = NM_001068636.1 GI:115477009 GeneID:4345891| Length = 120...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0487500

Description

Zinc finger, RING-type domain containing protein

Version

NM_001068636.1 GI:115477009 GeneID:4345891

Length

1200 bp

Definition

Oryza sativa Japonica Group Os08g0487500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24201056..24202255

Sequence Coding Region

24201399..24202214

Expression

GEO Profiles:Os08g0487500

Genome Context

<gbrowseImage1> name=NC_008401:24201056..24202255 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24201056..24202255 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctcgtctctcctcgtccggctcgcctccgacgagatgccccaaaccctagatgcgtcgtcgtcgtcttcgtgctacgacgccttcgtgccggtgttccacccggatccgtcgtcggggttctcggcggcgtcggtggtggcggccgccgaccgcctccgcagccagttcctctccgtggagcccgacctcttccacgacgcgctcgtcgcgccaagccccgaccacctcggcttccccgatgaggaggaggaggaggagatccggtgggattgcctccaattggatgacgacgacgaggaggaggagggggtggcggatctgcggcttgaggcctccaacgcggcggaggaattcgattgggaggaggtggcatcgccctccggcggcgccgggatggatcagccggagcccgagtgggaggtcctcgccgacgtgccgccgccgccgccgccgcccgccgacgagggcttcgtgtacacctccgaccgtgacgtgtacgaggtgctcgtcggggagggtttgttcctgaagagcaagccgcccgcggcgaggtcggccgtcgaggcgctaccgtccgccgtcgtcgccgccggcgaggacggcgaaggggaggagtgcgcggtgtgcagggacggcgtcgccgccggggagcgcgtgaagaggctgccctgctcgcacggttaccacgaggagtgcatcatgccgtggctcgacgtgcgcaactcgtgcccgctctgccgcttcgagctgcccaccgacgacccccagtacgagagctggaaggcctcgcgagctgcggctgcctga</cdnaseq>

Protein Sequence

<aaseq>MASSSLLVRLASDEMPQTLDASSSSSCYDAFVPVFHPDPSSGFS AASVVAAADRLRSQFLSVEPDLFHDALVAPSPDHLGFPDEEEEEEIRWDCLQLDDDDE EEEGVADLRLEASNAAEEFDWEEVASPSGGAGMDQPEPEWEVLADVPPPPPPPADEGF VYTSDRDVYEVLVGEGLFLKSKPPAARSAVEALPSAVVAAGEDGEGEECAVCRDGVAA GERVKRLPCSHGYHEECIMPWLDVRNSCPLCRFELPTDDPQYESWKASRAAAA</aaseq>

Gene Sequence

<dnaseqindica>42..857#agggcgcgattttttcgttcccctctctatctctcgcgtccatggcgtcctcgtctctcctcgtccggctcgcctccgacgagatgccccaaaccctagatgcgtcgtcgtcgtcttcgtgctacgacgccttcgtgccggtgttccacccggatccgtcgtcggggttctcggcggcgtcggtggtggcggccgccgaccgcctccgcagccagttcctctccgtggagcccgacctcttccacgacgcgctcgtcgcgccaagccccgaccacctcggcttccccgatgaggaggaggaggaggagatccggtgggattgcctccaattggatgacgacgacgaggaggaggagggggtggcggatctgcggcttgaggcctccaacgcggcggaggaattcgattgggaggaggtggcatcgccctccggcggcgccgggatggatcagccggagcccgagtgggaggtcctcgccgacgtgccgccgccgccgccgccgcccgccgacgagggcttcgtgtacacctccgaccgtgacgtgtacgaggtgctcgtcggggagggtttgttcctgaagagcaagccgcccgcggcgaggtcggccgtcgaggcgctaccgtccgccgtcgtcgccgccggcgaggacggcgaaggggaggagtgcgcggtgtgcagggacggcgtcgccgccggggagcgcgtgaagaggctgccctgctcgcacggttaccacgaggagtgcatcatgccgtggctcgacgtgcgcaactcgtgcccgctctgccgcttcgagctgcccaccgacgacccccagtacgagagctggaaggcctcgcgagctgcggctgcctgaattgctgcgcggtaaaaaaaaaaggcaagcctttcttttcttgcacagattttatagagttgtatgtcttgggtttcaaactggtactatgatgaaagaaccaaactggtatgatgaaagaaagcgtagaggtagtcgcagagatggttttgcacctttcgatttgtttactttttttcttaaaagagggatttgtgttgtgacttaaggttgcgaggatattacataagtttatcctatatatatactgttgtatttattctgaatttgtagagtagcttctgtattacattttgccctgcagcacaattttgtaaatggatatggtggtgaaaatttcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0487500, RefSeq:Os08g0487500