BGIOSGA000161

From RiceWiki
Revision as of 17:54, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000161

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000161, complete gene.

LocusTag

P0504E02.3

Ensembl Transcript ID

BGIOSGA000161-TA

Ensembl Protein ID

BGIOSGA000161-PA

Length

1768

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45061515..45063282

Sequence Coding Region

45063202..45063282,45062545..45063117,45061938..45062000,45061716..45061793,45061515..45061625

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45061515..45063282 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45061515..45063282 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAATTAAAAGACAAGTTTTTGGTTCAGACAACAGTTGTCCCTTATGGAACATCAGATGAGGACCTTGTTCCTTCTTATTTTTCTAAAGAAAGTGGCAGATATATCGAGGAAAGTAAATTGAGGGTTGTTCTTGTTAGTGCATCTCATCCTTTTGGAGAGCAGCCAATTAATGGAATTCCAAACACTGAGGCAGCTGTTGAGGTTCCTTCATTAAAGGACACGTTGAACATTAAGAATGAAATTCCAGTTGCAGAGAAAGAGGTTCATTCCCCTCTGGAAGAAGACCCAGTTGTTATTCCTGCACCCCCTTACCCTGTCAAGGAGGCTCCAATTCTCAGAGAAGTTCCTGTGCATATTTCCCCTGTCAGGGAGACTTCATTCCTGAGAGAAGTTCCTGCACCCGTATCCCCAGTCAAGGAGACTCCAATCCTGAGAGAAGTTCCTACACCATTGAAGGAGACACCTGTTATATTGACAGAATCTCCACCCCCTCCAACAGATACCTCTTCCATTACTGTCGAATCTCTCCATCCTTTCGAACAAAACCTAGCAAGTTTGAAGGAATCTCCTCTAGAAGAAACTCTTCCAAAAGCAGCTGTCGTGTTAAGTGAGCAAGGGGCTGTCAATGTGCAGAGTCGTCAACTATGCCATGTAACAGAAGATGTTCAGAACCTGAAGTCAAAGCTCAATGGTCTCGAAGTAAAATTGGAAGAGGCTGAAAAAATGATAATAAAGCTGAGAGAAGAGAGCAGAACTACCACCCAGGAGCGGGATAAGTTACAGCAAGAAATGATGTTTCTACGAAAGAAGGGAACACCAAGGAATCAAGTTGGTTTCCCCTTGCTGTTTGTGGTTTATGTGGCACTTCTTGGTACTTCTCTGGGTTACCTCCTGCGCTTATGA</cdnaseq>

Protein Sequence

<aaseq>MQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVVLVSASHPFGEQPINGIPNTEAAVEVPSLKDTLNIKNEIPVAEKEVHSPLEEDPVVIPAPPYPVKEAPILREVPVHISPVRETSFLREVPAPVSPVKETPILREVPTPLKETPVILTESPPPPTDTSSITVESLHPFEQNLASLKESPLEETLPKAAVVLSEQGAVNVQSRQLCHVTEDVQNLKSKLNGLEVKLEEAEKMIIKLREESRTTTQERDKLQQEMMFLRKKGTPRNQVGFPLLFVVYVALLGTSLGYLLRL</aaseq>

Gene Sequence

<dnaseqindica>1..81#166..738#1283..1345#1490..1567#1658..1768#ATGCAATTAAAAGACAAGTTTTTGGTTCAGACAACAGTTGTCCCTTATGGAACATCAGATGAGGACCTTGTTCCTTCTTATGTAAGCACATAAGAATATGACCCCCTTTTTTTTGGAAAGAGCTGTACACATGGTGTTCTTCTAACTCATCATTTTTTTTTACAGTTTTCTAAAGAAAGTGGCAGATATATCGAGGAAAGTAAATTGAGGGTTGTTCTTGTTAGTGCATCTCATCCTTTTGGAGAGCAGCCAATTAATGGAATTCCAAACACTGAGGCAGCTGTTGAGGTTCCTTCATTAAAGGACACGTTGAACATTAAGAATGAAATTCCAGTTGCAGAGAAAGAGGTTCATTCCCCTCTGGAAGAAGACCCAGTTGTTATTCCTGCACCCCCTTACCCTGTCAAGGAGGCTCCAATTCTCAGAGAAGTTCCTGTGCATATTTCCCCTGTCAGGGAGACTTCATTCCTGAGAGAAGTTCCTGCACCCGTATCCCCAGTCAAGGAGACTCCAATCCTGAGAGAAGTTCCTACACCATTGAAGGAGACACCTGTTATATTGACAGAATCTCCACCCCCTCCAACAGATACCTCTTCCATTACTGTCGAATCTCTCCATCCTTTCGAACAAAACCTAGCAAGTTTGAAGGAATCTCCTCTAGAAGAAACTCTTCCAAAAGCAGCTGTCGTGTTAAGTGAGCAAGGGGCTGTCAATGTGCAGAGTCGTCAACTATGCCATGTAAGCATTTCCTCTACTATTTTCACATGCCCCTTAAGTGGAGTATAAGGCAAAAATGAGTTGAGTTTCTGGAGGCCTGCAGTGCTAGTCTTTGACTGAATTTTAGCTGGTCAGAGTTCTTGCTAACCATCTCAATTGGAAAGTCTATTAGTGGCTAGATTTTTACAAAATTCCACCTATTCCTGGTTAAAATGTCTCCACTTAGTTTTCAAACACCATGGCATAAGAATGCTTACTTGTTCTGACTATTGATTCGAATTTTGGTCACATTTGCCAATCGTCCATTGCATCCAACATCCTTTAATTGGTCATACACAACAAGTGTATTTCTTGAAATAAGTATTTTATATTTTGTGATTCTTCTATCTTCCATTAAACTGGAAGTAGCTTTAATGAAATAAATATGCAACTAGATACAATGCACTAAAGCTAAGCTGCACTTATAGAGATCTTCAAATTACATATTTTTCTCACTACATTTCCGATCTGTCTCTTAAACAATCTTCCCACTAGTTTTATTGAAGTTGCTCTGTATTTTGGACAGGTAACAGAAGATGTTCAGAACCTGAAGTCAAAGCTCAATGGTCTCGAAGTAAAATTGGAAGAGGTAATATTTTGGACAGGACAAATCAATAGTTCAGAATGAGATCCTCCTGAAACATGGAGCTTATAATGCTTGATAAACTAAGATTTTAATCTTATATTCCAGATAATACTTTCTGAAGTGAAACACAAACTTTCTGATTTGCAGGCTGAAAAAATGATAATAAAGCTGAGAGAAGAGAGCAGAACTACCACCCAGGAGCGGGATAAGTTACAGCAAGAAATGGTATGACTCAAATTCCATCCTGAAACCACTGGTCATATACTATGTTTCATGCATGACATGTCTACTAATTCTGATGCATGGCTTGGCTAGATGTTTCTACGAAAGAAGGGAACACCAAGGAATCAAGTTGGTTTCCCCTTGCTGTTTGTGGTTTATGTGGCACTTCTTGGTACTTCTCTGGGTTACCTCCTGCGCTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000161