Os08g0490100

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Revision as of 13:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0490100| Description = Similar to PBF protein| Version = NM_001068645.2 GI:297608777 GeneID:4345900| Length = 1261 bp| Definition = Oryza ...")
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Gene Name

Os08g0490100

Description

Similar to PBF protein

Version

NM_001068645.2 GI:297608777 GeneID:4345900

Length

1261 bp

Definition

Oryza sativa Japonica Group Os08g0490100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24320681..24321941

Sequence Coding Region

24320839..24321669

Expression

GEO Profiles:Os08g0490100

Genome Context

<gbrowseImage1> name=NC_008401:24320681..24321941 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24320681..24321941 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggagcagcagccggagaccggccgccggccggcgcagcagttcgccaccgtcgacctgcgccgtcccaagggctacgcggcggctcccgcgacgccacagcctggttcggctgcgactgctgctgccgccgctggcccggctgcgacggcggcagcggcggcggcgggggagggtgacccgtgcccgcggtgcgagtcgcgggacaccaaattctgctactacaacaactacaacacctcccagccccggcacttctgcaagtgttgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcggcacgcgcaagaagtcctcgtcttcgtcgtcgtcgtcttcctcgtcatccgccgccgccgcagcacccgccgccaagcgccagaagacgtcgaagaagcgccgcgtcacgactcccgagcccctcgccgccaccacccccgtcctcaccgaagccgccgctgactccgccgccaagacgacgaccgaagctacgtcggagaagaagacgacgacttccacaacgacgacgacaccgccggcgcctgacaccacgagcgagatcaccacggagctcgtcgtcccggccgtggaggaggactcgttcacggacctcctgcagccggactccgccgccgtcaccctcggcctcgacttctccgactacccgtccatcaccaagagtctggccgacccggacctgcacttcgagtggccgccgccggcgttcgacatggcgtcctactggccggccggcgccgggttcgccgacccggacccgaccgccgtgttcctcaacctcccatga</cdnaseq>

Protein Sequence

<aaseq>MQEQQPETGRRPAQQFATVDLRRPKGYAAAPATPQPGSAATAAA AAGPAATAAAAAAGEGDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLR NVPVGGGTRKKSSSSSSSSSSSSAAAAAPAAKRQKTSKKRRVTTPEPLAATTPVLTEA AADSAAKTTTEATSEKKTTTSTTTTTPPAPDTTSEITTELVVPAVEEDSFTDLLQPDS AAVTLGLDFSDYPSITKSLADPDLHFEWPPPAFDMASYWPAGAGFADPDPTAVFLNLP </aaseq>

Gene Sequence

<dnaseqindica>159..989#accttcgtcgtcaccgcgactgcgaccataagagactcccgcttccgccaaccgcccaccacccgttcgaccatttgcttgcccccgctcctcggttcctcccgactccaccggcgcgcgcgcgcggagggaccagagcagccacggcgccgccgcgcatgcaggagcagcagccggagaccggccgccggccggcgcagcagttcgccaccgtcgacctgcgccgtcccaagggctacgcggcggctcccgcgacgccacagcctggttcggctgcgactgctgctgccgccgctggcccggctgcgacggcggcagcggcggcggcgggggagggtgacccgtgcccgcggtgcgagtcgcgggacaccaaattctgctactacaacaactacaacacctcccagccccggcacttctgcaagtgttgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcggcacgcgcaagaagtcctcgtcttcgtcgtcgtcgtcttcctcgtcatccgccgccgccgcagcacccgccgccaagcgccagaagacgtcgaagaagcgccgcgtcacgactcccgagcccctcgccgccaccacccccgtcctcaccgaagccgccgctgactccgccgccaagacgacgaccgaagctacgtcggagaagaagacgacgacttccacaacgacgacgacaccgccggcgcctgacaccacgagcgagatcaccacggagctcgtcgtcccggccgtggaggaggactcgttcacggacctcctgcagccggactccgccgccgtcaccctcggcctcgacttctccgactacccgtccatcaccaagagtctggccgacccggacctgcacttcgagtggccgccgccggcgttcgacatggcgtcctactggccggccggcgccgggttcgccgacccggacccgaccgccgtgttcctcaacctcccatgagcccactcgcccggcggcggcggcggcggctcaggtgggtgtgggggtttccaactacacccgatgatgatttcatcagtttccgattaattagtaaattgcgcgtggggtatatggtgaaaatgatgacgttaatcttagctttttgagattagtggccgtgttttactctcgagaggggctaactcaaccaagtttgggttgtttttcatgtgtataactcctatcaaggcttgggcttttttttttcatacaatggtcctgctattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0490100, RefSeq:Os08g0490100