BGIOSGA000168

From RiceWiki
Revision as of 17:54, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000168

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000168, complete gene.

LocusTag

P0492G09.22

Ensembl Transcript ID

BGIOSGA000168-TA

Ensembl Protein ID

BGIOSGA000168-PA

Length

1533

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45001253..45002785

Sequence Coding Region

45002504..45002785,45002058..45002305,45001253..45001823

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45001253..45002785 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45001253..45002785 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCTGGTGCTGCTGCCGTCTGCGCGGAGAAGGCGAGTGAGATCATCAAGATCGGTCAGGTTGATGACGTGCAGGAGCTGCAGCGACGACTGTGCTCCGCCACCACCGTGCCGGAGCGGTACATCAGGGACGGCGACGACCGGCCGGATCACGCCGTCGTCGACGACGAGCGCGCGCAGGAGCGGATTCCGGTGATCGACGTCGGCGAGCTGCAGCGCGGCAGTGAGGACGAGCTCGACAACCTCAGGCTCGCCTGCGAGCAGTGGGGCTTCTTCCAGGTTGTGAACCATGGAGTGGAGGAGGAGACGATGGAGGAGATGGAGAAGGCGGCGAGGGAGTTCTTCATGCTGCCGCTGGAGGAGAAGGAGAAGTACCCCATGGAGCCCGGCGGCATCCAGGGCTACGGCCACGCCTTCGTCTTCTCCGACGACCAGAAGCTCGATTGGTGCAACATGCTCGCCCTCGGCGTCGAGCCCGCCTTCATCCGCCGCCCCAACCTCTGGCCGACAACTCCGGCCAACTTTAGTGAGACGCTGGAGAAGTACTCGGTGGAGATCAGGGAGCTGTGCGTGCGGCTGCTGGAGCACATCGCGGCGGCGCTGGGGCTGGCGCCGGCGAGGCTGAACGGGATGTTCGGGGAGGCAGTGCAGGCGGTGAGGATGAACTTCTACCCGCCGTGCCCGCGGCCGGAGCTGGTGCTGGGGCTGAGCCCGCACTCCGACGGCAGCGCGGTCACCGTGCTCCAGCAGGACGCGGCGTTCGCCGGGCTGCAGGTGCTCCGGGGCGGCGGCGGCTGGGTGGCCGTCCATCCCGTCCCCGGCGCCCTCGTCGTCAACGTCGGCGACACGCTCGAGGTGCTCACCAATGGCAGGTACAAGAGCGTGGAGCACCGGGCGGTGGCCAGCGGCGAGCACGACCGCATGTCCGTCGTCACCTTCTACGCGCCGGCGTACGACGTCGAGCTCGGCCCGCTGCCGGAGCTCGTCGCCGACGGGGAGCCGCGCAGGTACCGGACGTACAACCACGGCGAGTACAGCCGGCACTACGTCACCAGCCGGCTCCAGGGCAAGAAGACGCTTGAATTTGCAAAGATTTAA</cdnaseq>

Protein Sequence

<aaseq>MDSGAAAVCAEKASEIIKIGQVDDVQELQRRLCSATTVPERYIRDGDDRPDHAVVDDERAQERIPVIDVGELQRGSEDELDNLRLACEQWGFFQVVNHGVEEETMEEMEKAAREFFMLPLEEKEKYPMEPGGIQGYGHAFVFSDDQKLDWCNMLALGVEPAFIRRPNLWPTTPANFSETLEKYSVEIRELCVRLLEHIAAALGLAPARLNGMFGEAVQAVRMNFYPPCPRPELVLGLSPHSDGSAVTVLQQDAAFAGLQVLRGGGGWVAVHPVPGALVVNVGDTLEVLTNGRYKSVEHRAVASGEHDRMSVVTFYAPAYDVELGPLPELVADGEPRRYRTYNHGEYSRHYVTSRLQGKKTLEFAKI</aaseq>

Gene Sequence

<dnaseqindica>1..282#481..728#963..1533#ATGGATTCTGGTGCTGCTGCCGTCTGCGCGGAGAAGGCGAGTGAGATCATCAAGATCGGTCAGGTTGATGACGTGCAGGAGCTGCAGCGACGACTGTGCTCCGCCACCACCGTGCCGGAGCGGTACATCAGGGACGGCGACGACCGGCCGGATCACGCCGTCGTCGACGACGAGCGCGCGCAGGAGCGGATTCCGGTGATCGACGTCGGCGAGCTGCAGCGCGGCAGTGAGGACGAGCTCGACAACCTCAGGCTCGCCTGCGAGCAGTGGGGCTTCTTCCAGGTAATTAACACTACGAGTTTATTTTTTTAAACGACTTGCACAAGAAGTGCGAAGTTCTATTGATATAGCAGAAAAAAATTAAGATTATATTTCTGAAGATCATAACCAGGAAAACGAAAAATTATACCTCCACCACTACAAGTTTATTGATTAATTAGCTAGCTAGATTGTGTTTGGGAATGATTTAATTGGTTGTAGGTTGTGAACCATGGAGTGGAGGAGGAGACGATGGAGGAGATGGAGAAGGCGGCGAGGGAGTTCTTCATGCTGCCGCTGGAGGAGAAGGAGAAGTACCCCATGGAGCCCGGCGGCATCCAGGGCTACGGCCACGCCTTCGTCTTCTCCGACGACCAGAAGCTCGATTGGTGCAACATGCTCGCCCTCGGCGTCGAGCCCGCCTTCATCCGCCGCCCCAACCTCTGGCCGACAACTCCGGCCAACTTTAGGTAACAGCTTCTCCCTCCATCCGTTTCTAAATATTTGATGCCGTTAACTTTTTTAATTAAACATATTTAACCGTTTATCTTATTTGAAATTTTTTGTAAAATATATAAAATTATATGTATAATAAAAGTATATTTAACCCTAAATCAAATAATAGAAAAAAAATAATAATAATTACTTAATTTTTTTAATAAGAGAAAGGGTTAAACATGTTTTAATGGCGATCTCGAGTGCAGTGAGACGCTGGAGAAGTACTCGGTGGAGATCAGGGAGCTGTGCGTGCGGCTGCTGGAGCACATCGCGGCGGCGCTGGGGCTGGCGCCGGCGAGGCTGAACGGGATGTTCGGGGAGGCAGTGCAGGCGGTGAGGATGAACTTCTACCCGCCGTGCCCGCGGCCGGAGCTGGTGCTGGGGCTGAGCCCGCACTCCGACGGCAGCGCGGTCACCGTGCTCCAGCAGGACGCGGCGTTCGCCGGGCTGCAGGTGCTCCGGGGCGGCGGCGGCTGGGTGGCCGTCCATCCCGTCCCCGGCGCCCTCGTCGTCAACGTCGGCGACACGCTCGAGGTGCTCACCAATGGCAGGTACAAGAGCGTGGAGCACCGGGCGGTGGCCAGCGGCGAGCACGACCGCATGTCCGTCGTCACCTTCTACGCGCCGGCGTACGACGTCGAGCTCGGCCCGCTGCCGGAGCTCGTCGCCGACGGGGAGCCGCGCAGGTACCGGACGTACAACCACGGCGAGTACAGCCGGCACTACGTCACCAGCCGGCTCCAGGGCAAGAAGACGCTTGAATTTGCAAAGATTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000168